FFCP PHASE1:Hg19::chr12:49717021..49717079,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10024 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12327 | |||
|TSSclassifier=strong | |||
|UniProt=Q12815,Q6PJU7,F8VR46,F8VVT5,F8VSF9,F8VXV6,F8VVS4,F8VXF3,B7Z5Q9,F8W130 | |||
|association_with_transcript=0bp_to_ENST00000257909,ENST00000380327,ENST00000546735,ENST00000546776,ENST00000548311,ENST00000549534,ENST00000549891,ENST00000550346,ENST00000550709,ENST00000551192,ENST00000551245_5end | |||
|coexpression_cluster_id=C281 | |||
|description=CAGE_peak_1_at_TROAP_5end | |||
|id=chr12:49717021..49717079,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.65e-25!254;CL:0000548!5.95e-17!679;CL:0000004!5.95e-17!679;CL:0000255!5.95e-17!679;CL:0000012!2.06e-16!682;CL:0002321!6.48e-11!248;CL:0000220!2.03e-10!246;CL:0000003!3.10e-09!722;CL:0000063!2.65e-08!578;CL:0000076!2.56e-07!62 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,4.03e-26,253;CL:0002321,7.02e-11,250;CL:0000076,4.58e-07,63 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!4.25e-55!235;DOID:14566!1.67e-53!239;DOID:0050687!5.60e-30!143;DOID:0050686!7.42e-25!137;DOID:305!4.49e-24!106;DOID:2531!2.46e-18!51;DOID:0060083!2.46e-18!51;DOID:1240!1.82e-14!39;DOID:8692!5.86e-11!31 | |||
|ontology_enrichment_disease_v019=DOID:2531;1.09e-11;51!DOID:0060083;1.09e-11;51!DOID:1240;1.17e-11;39!DOID:8692;8.54e-11;31!DOID:305;1.36e-08;106!DOID:0050687;1.49e-07;143!DOID:299;9.00e-07;25 | |||
|ontology_enrichment_disease_v019_2=DOID:162,3.44e-55,235;DOID:14566,1.38e-53,239;DOID:0050687,5.98e-30,143;DOID:0050686,1.12e-24,137;DOID:305,3.64e-24,106;DOID:2531,1.51e-18,51;DOID:0060083,1.51e-18,51;DOID:1240,1.25e-14,39;DOID:8692,4.47e-11,31;DOID:299,9.04e-07,25 | |||
|ontology_enrichment_uberon=UBERON:0001737!1.92e-07!9;UBERON:0000072!5.94e-07!46 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.63e-07;9!UBERON:0001557;1.63e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.62e-07,9 | |||
|phase1_expression=0.181678379270557,3.42560838225573,0.140954404095971,2.00146596706261,0,0,10.1319951267324,0,0,29.2423384436796,50.2416840940148,24.028550934319,17.6723875413064,3.34169152992126,2.98257638155124,4.70627602516243,4.21886169616784,4.38186054232424,3.41552959153355,33.6120488549631,30.8041043778822,19.7476474531195,24.9025308804019,45.1685602740518,36.281822842898,29.9540550531969,31.5266263487792,32.6649742451769,1.18009283054671,0.383829398097213,0.928896739896456,34.9380065301992,26.506120852486,12.201882335504,56.241187621299,57.2942006924309,21.139231632109,0,0,0.434021741431704,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,1.81619850790011,0,0,0,0,0,0,0,0,0,0,0,3.51992488922645,0.546138611262131,0.889509253863555,1.28019066769952,0.800791974072025,2.87376219977242,0,1.90810750907073,0.569212969109448,0,0.382273228125229,0,0,23.967951714532,0.393419540227666,1.17903228824749,0.205601498999509,3.00935691703221,0.32592226663359,0,0,18.3827253860536,0.883817722424512,2.21533894583621,0.812411591295047,29.3329122171796,21.7199110424997,36.9985285358271,32.6093020987301,21.7352314301289,0,0,1.04535523804977,31.0467598991331,0.383220493601921,0.68725489096526,1.01207876807801,0.637130828648193,0.651083453856419,0,0.602300476311091,0.255973222308837,2.49861453104692,1.18388626022008,0.821127996921047,0.201606743224732,0.267440195783507,0,0,18.7796240717018,9.20610445273418,31.4452062574573,1.50401373190767,4.49024208778554,14.3151470469198,3.89307896242109,19.3796375186339,14.4124108350667,15.3710874962971,7.7932549921139,30.9650995048661,43.0109953629938,0,0.174129737299267,0.26591592103773,0,0,0,20.4725279587706,27.527507043396,18.7455870868101,19.7857779673403,16.3604780121863,28.3371583198269,25.9153758505645,1.8089173141853,2.84613010149368,2.67776490211736,19.3358072212391,7.60272105718513,7.32186172644509,16.5448386155641,12.9622711661082,30.8084062580075,39.0681108369535,48.5355480883119,32.1964938678355,13.2897192339538,26.5642528699091,0,0,16.5715739814163,0.993943903390637,14.4358783297621,0.132409180813219,27.8231522126349,23.7627816072899,9.53151920241922,8.5399196583764,8.88003174301776,7.78027588499416,12.1239604862719,26.4808283043803,6.65972681637698,1.72852777344,43.3494648892524,8.11616199758833,18.8255701109668,7.47243402759005,35.1129150944857,37.3926501490384,35.9554065157756,7.75785850768594,50.8534073670719,6.09622108937016,4.75201142912821,4.45080472701402,20.0235499626366,20.8399261126709,36.0239283861702,46.1687338327548,13.2990775432408,17.9980824561144,14.4049264025539,9.01428353439581,25.1819446615247,39.1069405801719,1.49490172172997,3.60284231971255,42.0127534518163,8.86251751450575,6.95629458123199,4.28068769562657,44.0506227149705,11.2052555935378,17.670364197088,2.76149695926898,1.77810662500693,16.6854508482809,14.1052937518696,27.6383765466095,3.67195621010264,11.1825909442242,6.02289650316908,48.7894824518382,42.1444663262323,49.9633954338929,38.1472682456563,68.3789505872953,46.7171019617062,3.12899064659632,8.36213219650751,49.728571686893,0,1.44375896333917,101.270620834106,95.2503498941275,100.501599461412,100.477809159211,94.9954376242891,100.840013122216,107.999877836292,107.333141423564,123.119090222845,26.5735963664873,35.0604434508615,7.4083322039652,7.3504355692771,0,2.94848165003288,0.590789906681404,104.626754561272,40.3402078421412,13.5538570135835,3.29250856225877,7.86812272803337,29.957633778666,9.81437518680414,26.064664424826,49.9168696934198,14.4331342025273,12.4045533323332,1.17408694235822,10.9718500298416,28.2421162671733,11.9860115907797,65.5869650306198,66.1034344813052,0.984868024349589,1.8720341211139,11.1473371716546,3.74935335947108,3.35964256397719,10.2078070014518,21.1358113578722,34.8760726216754,40.2551813123472,4.92663237895944,10.7419089496136,0.414656231081544,0.720599767084807,0.37872730027914,16.2554609387953,17.1894791501225,23.4434894420094,34.214489204541,15.2184689200919,33.3380794206748,11.4330573052231,28.8176886767577,23.9778037858304,36.5224663388331,0.258543431515556,7.15312891703765,49.027559648248,2.12750493267896,8.32059495290929,47.5833642384963,82.2724965735014,60.7442568156707,6.29103172095849,0,60.9197849217769,24.4302138220301,2.13235169245527,58.6044385970738,0,0.871533458600294,4.49878460319257,0,0.502257091432126,2.10833939483032,3.83399768786532,1.14861935834114,35.6592262601796,4.1986578933598,10.6847687726199,10.7436577943937,45.9549090373462,0.985153801009636,0.215627574859517,0.128343036279748,17.2784344471275,11.712586847186,13.9191986299985,10.3860084507296,17.2243462946354,0,0,0.414415513436035,0.24538298343828,7.50255781589516,1.62759014219841,3.95144636908534,12.8468871933956,7.7274183366628,7.9656162195045,0.601892199455438,0,4.1389228517002,20.5909935545985,17.3307018429201,13.5538438570209,4.69922777910577,2.40200396667599,0.206768026122887,0.215714200818617,0.640365346820666,8.18444442904901,18.3078983461547,32.6581516796055,0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| |||
|short_description=p1@TROAP | |||
}} |
Revision as of 13:19, 11 January 2014
Short description: | p1@TROAP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TROAP_5end |
Coexpression cluster: | C281_Hodgkin_Reticulocytes_chronic_NK_acute_retinoblastoma_small |
Association with transcript: | 0bp_to_ENST00000257909, ENST00000380327, ENST00000546735, ENST00000546776, ENST00000548311, ENST00000549534, ENST00000549891, ENST00000550346, ENST00000550709, ENST00000551192, ENST00000551245_5end |
EntrezGene: | TROAP |
HGNC: | 12327 |
UniProt: | Q12815Q6PJU7F8VR46F8VVT5F8VSF9F8VXV6F8VVS4F8VXF3B7Z5Q9F8W130 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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epithelial cell | 4.03e-26 | 253 |
embryonic cell | 7.02e-11 | 250 |
squamous epithelial cell | 4.58e-07 | 63 |
Ontology term | p-value | n |
---|---|---|
larynx | 1.62e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
cancer | 3.44e-55 | 235 |
disease of cellular proliferation | 1.38e-53 | 239 |
cell type cancer | 5.98e-30 | 143 |
organ system cancer | 1.12e-24 | 137 |
carcinoma | 3.64e-24 | 106 |
hematologic cancer | 1.51e-18 | 51 |
immune system cancer | 1.51e-18 | 51 |
leukemia | 1.25e-14 | 39 |
myeloid leukemia | 4.47e-11 | 31 |
adenocarcinoma | 9.04e-07 | 25 |