FFCP PHASE1:Hg19::chr12:56364848..56364864,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1017 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1771 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-39bp_to_ENST00000554545_5end | |||
|coexpression_cluster_id=C88 | |||
|description=CAGE_peak_12_at_CDK2_5end | |||
|id=chr12:56364848..56364864,+ | |||
|ontology_enrichment_celltype=CL:0000148!8.22e-17!10;CL:0000541!8.22e-17!10;CL:0000453!5.64e-15!5;CL:0000710!6.18e-14!20;CL:0000147!8.30e-12!14;CL:0001014!1.85e-10!2;CL:0001016!1.85e-10!2;CL:0000075!5.77e-10!27;CL:0000990!2.42e-08!8;CL:0002077!6.59e-08!33;CL:0002567!2.36e-07!3;CL:0000451!7.92e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0000148;2.84e-98;10!CL:0000147;1.65e-70;14!CL:0000710;1.16e-49;20!CL:0002566;9.91e-41;1!CL:0000075;4.92e-37;27!CL:0002077;1.12e-26;34!CL:0002567;1.22e-14;3!CL:0000149;3.60e-11;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,2.85e-98,10;CL:0000541,2.85e-98,10;CL:0000147,1.65e-70,14;CL:0000710,1.16e-49,20;CL:0002566,9.91e-41,1;CL:0000075,4.92e-37,27;CL:0002077,1.36e-29,34;CL:0000333,1.42e-23,41;CL:0000133,7.61e-17,59;CL:0002567,1.22e-14,3;CL:0000221,5.20e-14,72;CL:0000149,3.79e-11,4 | |||
|ontology_enrichment_development_v019=CL:0000221;1.93e-08;72!CL:0000133;7.89e-08;59 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0.118306800039844,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.04789892602411,0.763976851116555,4.68869788840188,0,1.54241239054985,1.20137223137567,2.00078502841405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234282829985426,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171986032471617,0.0967563312890851,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0824158583811665,0,0,0.0846733320657845,0,0,0,0,0,0.449947783103001,0.77380195455795,0,0,0,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.704815022316672,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0.570930667089935,0,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0.260994291965212,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0.194860308839388,0,0.327130788511688,0,0.245772908753719,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0.357382720883282,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157771562193185,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p12@CDK2 | |||
}} |
Revision as of 13:57, 11 January 2014
Short description: | p12@CDK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_CDK2_5end |
Coexpression cluster: | C88_Melanocyte_melanoma_Macrophage_Mesenchymal_migratory_Dendritic_Monocytederived |
Association with transcript: | -39bp_to_ENST00000554545_5end |
EntrezGene: | CDK2 |
HGNC: | 1771 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 2.85e-98 | 10 |
melanoblast | 2.85e-98 | 10 |
pigment cell | 1.65e-70 | 14 |
neurecto-epithelial cell | 1.16e-49 | 20 |
dark melanocyte | 9.91e-41 | 1 |
columnar/cuboidal epithelial cell | 4.92e-37 | 27 |
ecto-epithelial cell | 1.36e-29 | 34 |
migratory neural crest cell | 1.42e-23 | 41 |
neurectodermal cell | 7.61e-17 | 59 |
light melanocyte | 1.22e-14 | 3 |
ectodermal cell | 5.20e-14 | 72 |
visual pigment cell | 3.79e-11 | 4 |