FFCP PHASE1:Hg19::chr12:58176525..58176586,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10102 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12367 | |||
|TSSclassifier=weak | |||
|UniProt=F8W6R3,F8WCK2,C9JG32,B4E391,F5H2T7,F8VPA7,F8VS27,P43897,E5KS95 | |||
|association_with_transcript=0bp_to_ENST00000323833,ENST00000350762,ENST00000417094,ENST00000434359,ENST00000540550,ENST00000543727,ENST00000548851,ENST00000550559,NM_001172695,NM_001172696,NM_001172697,NM_005726,uc001sqh.2,uc001sqi.2,uc010sse.1,uc010ssf.1_5end | |||
|coexpression_cluster_id=C181 | |||
|description=CAGE_peak_1_at_TSFM_5end | |||
|id=chr12:58176525..58176586,+ | |||
|ontology_enrichment_celltype=CL:0000066!4.61e-10!254 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,5.49e-10,253 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!8.10e-07!235 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,8.10e-07,235 | |||
|ontology_enrichment_uberon=UBERON:0001737!2.45e-07!9;UBERON:0000119!5.55e-07!312;UBERON:0000483!8.14e-07!309 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.43e-07;9!UBERON:0001557;2.43e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000119,4.92e-08,309;UBERON:0000483,7.41e-08,306;UBERON:0001737,2.45e-07,9 | |||
|phase1_expression=30.1586109589124,35.1124859181212,28.8956528396741,35.0256544235956,26.37070457121,20.9361245784089,45.5939780702959,24.6370750636464,32.1258322685801,41.529035268755,53.0328887659045,36.6981505178689,31.1245034309575,21.9066444739283,25.5175979310495,26.2206807116192,30.1347264011988,36.5155045193687,27.3242367322684,37.0594384811132,37.9441285714311,38.2414760203267,20.322755086305,30.1123735160345,28.1215512692358,30.5653622991805,31.1161234015294,32.9011065891179,10.6208354749204,19.1914699048606,11.3015770020735,42.2933763260306,24.3976794210383,21.4457325896737,40.825214705819,43.2194466761761,31.1216465694938,7.20194031091441,8.22232234627581,8.89744569934992,11.867520134716,13.6035339727971,13.3939295169777,6.39752250630085,9.44689859222024,16.4957161607715,4.64858073811369,3.28934310417461,4.95530193432166,4.31538588483226,8.19714260893122,6.62150243688039,5.17118521104928,7.10033151942209,6.77132432971709,3.76484679085209,5.45812300115692,7.64059847113288,3.67300670845083,4.8139354061414,1.27867425159808,7.58657990429447,6.78176435913548,11.08184351385,3.48251086354301,2.26954089876456,7.4738669879469,4.52247597462138,5.73631210262222,5.86409880703815,6.05399502633369,5.52416453981347,6.32924774881769,23.2380814943136,17.6461568970986,29.561869016681,16.1753228850953,14.4169817127846,14.3045772160401,25.6511469367124,20.0905843971081,22.2850267592853,31.6793240030381,21.2994058392231,18.6796943311347,22.6167017960249,18.4182154036566,25.2891073579973,31.7301538936734,19.0810750907073,14.2303242277362,14.6809297342735,19.8782078625119,15.8605594294831,16.8152568894461,41.6146853944622,23.4084626435461,35.763979410174,25.2889843769396,23.7404823454763,29.3330039970231,27.4599727326145,27.2757419771076,22.3935018339199,32.7012557297069,26.8056012446182,28.1636018315616,22.5440722717188,24.8413353839367,25.6523131181735,36.478202347732,22.8944437730691,20.3152591532023,25.9514603247022,32.4060123795428,22.3219405114205,28.7415370201441,23.3666662928188,22.5187525897358,24.5295369029554,20.8346705234054,26.6126572445545,17.918439170255,19.4539648954716,32.4819889036099,22.0202844400936,24.6338399076314,20.362281065698,28.3486607530518,30.992422430919,43.8852359365131,64.3872825315491,21.3530478278696,24.2164232097659,33.0883021019687,32.5904667661853,30.2208659879418,24.3317435151318,25.9025399029546,33.037680221922,30.1273314927422,26.3922837127891,30.6008042165735,45.2357020197004,16.5519170763889,14.6268979331384,19.2789042752354,18.6022686958167,29.7437353605666,25.2591100904104,23.8514888840046,39.5707913748817,30.2012236398607,31.6572447477445,32.3014565881628,30.2629846134074,23.198441285586,18.864423419361,17.4325468716488,14.0582657361161,31.0178574174043,29.650612123022,18.7927784312091,26.8394048652484,21.8738325928075,20.8068366901906,21.3302903994861,20.607900928448,36.795992991812,33.2242980848845,31.8771034438909,11.8602375692457,0,38.8123706406856,14.4121865991642,20.1342513546682,27.0114728858966,22.6600930391563,21.9894396962981,30.2765904076846,29.8897188043174,29.1067707132249,23.6520386903822,27.4809771022164,33.3462282351456,21.9468270085151,31.1134999219199,28.1185718200556,36.2105689123172,42.2149147942892,32.4303636797408,33.8211356094043,35.1264289278845,36.0958573224779,23.2735755230578,28.0062243470831,19.7352242045712,9.50402285825643,19.7813543422846,31.8556476678309,36.6495252326282,26.2604337768343,26.5251262128564,15.7926545825984,29.850478219897,23.2930724807255,20.4323760112972,31.8744434679659,26.9084453533293,24.3455423253167,20.7693263136371,30.0091096084402,23.4959766663641,30.6592242654299,24.0090744667751,16.0337515629203,25.041310326428,25.4958111986556,21.539676282298,16.9728359659752,22.0105947360301,21.9639574136256,38.8293756391017,19.7126070226563,22.3651818884484,22.9443676311203,41.1051389656736,42.4095258628753,48.1042923479806,37.7326240255948,52.4827369821307,54.0166491432228,28.1609158193669,28.302601280487,29.0083334840209,28.3264436099507,37.5377330468185,56.1957300189259,66.9281219610064,60.9757905605209,57.7940417117744,57.3022937963028,63.5885259217739,58.1122938170309,67.6964054682444,76.5646842323317,37.6459281858571,47.6822030931716,39.5111050878144,36.7521778463855,53.237114625169,60.9352874340128,34.8566044942028,44.1463099414651,32.7149246524682,26.2498749756744,18.3282976632405,31.4724909121335,23.0211346822635,19.1658081478156,31.2775973097912,56.1564784050972,36.0828355063183,15.8824654815855,16.9068519699583,28.5845566566926,45.3725802325079,31.9626975754125,57.6849210510271,49.7921974015026,19.4511434809044,20.8263795973922,27.1995026988373,27.1828118561653,19.9898732556643,25.8030676981143,21.225369880575,25.5757865892287,41.4053293498428,13.7945706610864,16.2889602924468,7.87846839054934,9.22367701868553,9.08945520669936,31.0504703088707,24.0652708101715,25.7878383862103,23.9501424431787,36.5037599096798,45.6521447922755,35.7283040788223,30.9481792793196,34.8768055066624,24.3483108925554,23.1396371206422,32.189080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| |||
|short_description=p1@TSFM | |||
}} |
Revision as of 14:16, 11 January 2014
Short description: | p1@TSFM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TSFM_5end |
Coexpression cluster: | C181_liposarcoma_somatostatinoma_neuroblastoma_mesothelioma_nonsmall_small_Alveolar |
Association with transcript: | 0bp_to_ENST00000323833, ENST00000350762, ENST00000417094, ENST00000434359, ENST00000540550, ENST00000543727, ENST00000548851, ENST00000550559, NM_001172695, NM_001172696, NM_001172697, NM_005726, uc001sqh.2, uc001sqi.2, uc010sse.1, uc010ssf.1_5end |
EntrezGene: | TSFM |
HGNC: | 12367 |
UniProt: | F8W6R3F8WCK2C9JG32B4E391F5H2T7F8VPA7F8VS27P43897E5KS95 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 5.49e-10 | 253 |
Ontology term | p-value | n |
---|---|---|
cell layer | 4.92e-08 | 309 |
epithelium | 7.41e-08 | 306 |
larynx | 2.45e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
cancer | 8.10e-07 | 235 |