FFCP PHASE1:Hg19::chr12:115121587..115121597,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6926 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11602 | |||
|TSSclassifier=strong | |||
|UniProt=O15119 | |||
|association_with_transcript=-192bp_to_ENST00000257566_5end | |||
|description=CAGE_peak_10_at_TBX3_5end | |||
|id=chr12:115121587..115121597,- | |||
|ontology_enrichment_celltype=CL:0000055!1.87e-12!180;CL:0000057!4.61e-09!75;CL:0002620!6.80e-09!23;CL:0000680!2.38e-08!57;CL:0000056!2.38e-08!57;CL:0000355!2.38e-08!57;CL:0000183!3.18e-08!59;CL:0000187!3.00e-07!54;CL:0000359!3.55e-07!32;CL:0000192!9.99e-07!42;CL:0000514!9.99e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0002595;3.60e-10;5!CL:0002593;2.16e-07;2!CL:0002602;2.16e-07;2!CL:0002620;2.46e-07;23!CL:0000134;9.40e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0002595,1.60e-10,5;CL:0002593,1.66e-07,2;CL:0002602,1.66e-07,2;CL:0002620,3.55e-07,23 | |||
|ontology_enrichment_development_v019=UBERON:0007297;1.47e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3307;5.89e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3307,4.63e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0000914!3.89e-12!83;UBERON:0002329!3.89e-12!83;UBERON:0003077!3.89e-12!83;UBERON:0003059!3.89e-12!83;UBERON:0007282!3.89e-12!83;UBERON:0009618!3.89e-12!83;UBERON:0007285!3.89e-12!83;UBERON:0005256!5.59e-12!143;UBERON:0000486!1.15e-11!82;UBERON:0004290!2.30e-11!70;UBERON:0003102!5.43e-11!95;UBERON:0000481!2.55e-10!347;UBERON:0003104!4.14e-09!238;UBERON:0009142!4.14e-09!238;UBERON:0002385!4.84e-09!63;UBERON:0001015!4.84e-09!63;UBERON:0000383!4.84e-09!63;UBERON:0000475!1.20e-08!365;UBERON:0002100!2.25e-08!216;UBERON:0001134!2.30e-08!61;UBERON:0002036!2.30e-08!61;UBERON:0003082!2.30e-08!61;UBERON:0002199!1.22e-07!45;UBERON:0002416!1.22e-07!45;UBERON:0002097!4.20e-07!40 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;3.23e-10;3!UBERON:0004054;3.23e-10;3!UBERON:0003834;3.60e-10;5!UBERON:0001533;3.60e-10;5!UBERON:0005904;9.33e-08;4!UBERON:0006444;2.16e-07;2!UBERON:0001995;2.16e-07;2!UBERON:0002456;2.16e-07;2!UBERON:0004715;2.16e-07;2!UBERON:0003513;2.88e-07;7!UBERON:0002097;3.76e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003834,1.60e-10,5;UBERON:0001533,1.60e-10,5;UBERON:0006947,3.83e-10,3;UBERON:0004054,3.83e-10,3;UBERON:0002199,3.96e-08,46;UBERON:0002416,3.96e-08,46;UBERON:0002097,5.13e-08,41;UBERON:0005904,1.06e-07,4;UBERON:0003513,1.64e-07,7;UBERON:0006444,1.66e-07,2;UBERON:0001995,1.66e-07,2;UBERON:0002456,1.66e-07,2;UBERON:0004715,1.66e-07,2 | |||
|phase1_expression=0.363356758541113,0,0,0,0,0,0,0.631719873426831,0,0,0,0,0,1.23766352960047,2.98257638155124,0.672325146451775,1.20538905604795,0.730310090387373,0.975865597581014,0.738726348460727,0.408001382488506,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0.573673241497627,0,0,0,0.24666754841716,0,0.269421344139376,0.490385709340376,0,0,0.234321431833797,0.312160076830321,1.1409436430889,1.04614076386261,0.23486899728753,0.971237666208789,0.421352420106746,0.61246251376468,0.982674538494144,0.516628905878827,3.56400857184616,0.247266929278557,0,0,0.673344455816265,0.750711119231785,0.277064115484183,0,0.612975591598039,0,0.340296549480063,1.4351170855109,0.213557388818567,0,1.80054657650641,1.13357782162283,0.515281080091258,0,0.168776332241266,0.487185025805993,2.01947019395292,0.184099797284599,0.161646056818812,1.06502877754984,0.403008392910561,0.847802961552438,0.193260853163297,0,0.286804595389004,0,0,0.116193942869518,0,0,0,1.56449532329816,1.28648187638577,0,0,0,0,0,0.482022059766964,0.220587945464788,0.217879444092406,0.237270619111097,0.134831308160164,0,0,0,0,0,0,0,0.982827216677626,1.18157981336281,0,0.122988438543114,0.171567810298526,0,0,0,0,0.325808305310325,0,0,0,0.352226082707465,0,0,0,0,0,0,0,0,0,0,0,0.268675568108545,0.290633938513962,0.383382679165211,0,0,0,0,0.12624243342638,0,0,0,0,0.102827492703324,0,0,0.112131084345361,0,0.1466765716419,0.387815147273333,3.57656445851882,0,0.26593811658487,1.04007436911366,0,0,1.0656887160644,0.142977993658148,0,0,1.30294473717494,0.355391948742546,3.16780749173372,0,0,0,0,0,0,0,0,0,0.579125226670317,2.26023954805422,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.736148950314839,0.500170521059677,0.271265023699736,2.28767947683888,0.713715955188647,0.157702415033935,0.702848489956279,0,0,2.0694614258501,0,0.368738337083406,0.868836144680828,0.391602314925481,0.343143423810856,0,0,0,0,0,0,0.496215615637554,0.61384789315225,0.280660094433074,0.128139149255701,0,0,0,1.07946785661859,0.532685175939381,0.657017248110473,1.03850885836724,0.581051892299796,0,0.200506470303285,0.184161977871793,0.574072240823034,0,0.262248829918848,0,0.0770153371044148,0.784349769176855,0,0,0,0,0,0,0.541892875087706,0.501689773854853,0,0,0,0,0,0,0,0,1.75169719801128,0,0,0,0.650060246036521,0,0.096670718292122,0.154048617114644,0.15350367472613,0.551346289938122,0.107420244868274,0.435050081742686,0.0852266274161009,0.0890320356467374,0,0,0,0.10115778085555,0.464845549297286,0.94443704049192,0,0,0.532306030317022,0,0.37064843820784,0.143124886741991,0.372158369359667,0,0,1.02359116524534,0.42793898803392,0,0.78494864019923,0,0,0,0.404364963146632,0,0.842516912477962,0,1.46228093778771,2.11300293513511,0.818999468447914,0,2.26016233240486,1.65409603063837,1.32687795048244,0.438450885253763,0.578775534266688,0,0.202910376962704,0,0.563391205064483,0.286822704408103,0.0982490410131212,0,2.12856638442359,0,0,0,0.699869440489966,0,0,0,1.12972560932135,0,1.68471475667626,0.443430153536676,0.689170200620878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0.111443384277478,0,0,0,0,0,0,0.222617410045812,0,0,0,0,0,0.818149460017238,0,0,0,0,0,0.690503839458535,0,0,0,0,0,0.260427761085233,0.349839999984783,0,0,0,0,0.344743373241465,0,0.173624994933292,0,0,0,0,0,0.219385397153973,0,0.278847488557207,0.846452843541768,0.341826167541004,0.46112780877612,0.359030577639089,0.217294743844016,0.31900115973192,0.457987967009312,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0.216388639742091,0,0.530745387020035,1.83309043480088,0,0.123563938946503,0,0,0.802577647298789,0,0,0,0,1.57833761139756,1.20990716048664,0,0,0.150323419414493,0.414752765588989,0,0.330991955875499,0,0,0,0.138674673013139,0,0,0,1.04836000945218,0.171986032471617,0.0967563312890851,0.438535902517113,0.328461828212837,0,0,0,0,1.19228767021794,0.0633107959558787,0.195551382734803,0,0,0.19980960958213,0,0,0,0,0,0.471388069233591,0,0.104602846312333,0.917983958726896,0.288950589901519,0,0,0,0,0,0.279282401272254,0.458320848023367,0.717873024576814,0,0,0.446342914883745,0.134366944973453,0,2.32991899054908,0.315132729228895,0.412079291905832,0.13480708770837,0,0,0,0,0,0,0,0.449947783103001,0,0,0,0.315222829196793,0.944182586429966,0,0,0.191915197319445,0,0,0,0,0,0.653174720218818,0,0,0.511164065356265,0,0,0,0,0,0.513260513652988,0,0.747511887973863,2.04365596629566,0,0,0,0,0.638341257770182,0,0.5013797880454,0.306345576763462,0,0.157054096250234,0,0.244052529803926,0.1251909307065,0,0,0.124192805882767,0,0,0.151649117541648,0.285465333544967,1.17632909849086,0,1.1593682288866,1.19403842309499,1.16856654923612,0.5548058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| |||
|short_description=p10@TBX3 | |||
}} |
Revision as of 16:04, 11 January 2014
Short description: | p10@TBX3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_TBX3_5end |
Coexpression cluster: | NA |
Association with transcript: | -192bp_to_ENST00000257566_5end |
EntrezGene: | TBX3 |
HGNC: | 11602 |
UniProt: | O15119 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the subclavian artery | 1.60e-10 | 5 |
smooth muscle cell of the internal thoracic artery | 1.66e-07 | 2 |
annulus pulposus cell | 1.66e-07 | 2 |
skin fibroblast | 3.55e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
thoracic segment blood vessel | 1.60e-10 | 5 |
subclavian artery | 1.60e-10 | 5 |
male genital duct | 3.83e-10 | 3 |
internal male genitalia | 3.83e-10 | 3 |
integument | 3.96e-08 | 46 |
integumental system | 3.96e-08 | 46 |
skin of body | 5.13e-08 | 41 |
duct of male reproductive system | 1.06e-07 | 4 |
trunk blood vessel | 1.64e-07 | 7 |
annulus fibrosus | 1.66e-07 | 2 |
fibrocartilage | 1.66e-07 | 2 |
internal thoracic artery | 1.66e-07 | 2 |
annulus fibrosus disci intervertebralis | 1.66e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
teratoma | 4.63e-08 | 2 |