FFCP PHASE1:Hg19::chr12:120724652..120724670,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C34 | |||
|description=CAGE_peak_at_chr12:120724652..120724670,- | |||
|id=chr12:120724652..120724670,- | |||
|ontology_enrichment_celltype=CL:0002541!1.11e-29!3;CL:0000039!2.63e-21!7;CL:0000586!2.63e-21!7;CL:0002537!5.58e-18!5;CL:0000349!8.44e-14!3;CL:0002577!8.44e-14!3 | |||
|ontology_enrichment_celltype_v019=CL:0002541;3.13e-54;3!CL:0000349;1.03e-45;19!CL:0002537;1.03e-32;5!CL:0000134;1.61e-08;55!CL:0000723;7.44e-08;61!CL:0002577;2.47e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,3.13e-54,3;CL:0000349,9.61e-46,19;CL:0002537,1.03e-32,5;CL:0002577,2.32e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0003124;8.95e-20;1 | |||
|ontology_enrichment_disease=DOID:1799!9.05e-11!1;DOID:10165!9.05e-11!1;DOID:1798!9.05e-11!1;DOID:3095!6.28e-07!22;DOID:2994!6.28e-07!22 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!4.23e-67!14;UBERON:0000158!4.23e-67!14;UBERON:0003124!2.48e-49!7;UBERON:0000478!1.31e-38!24;UBERON:0000476!1.11e-29!3;UBERON:0000920!1.11e-29!3;UBERON:0001987!1.81e-22!4;UBERON:0004340!1.81e-22!4;UBERON:0000305!3.99e-22!7;UBERON:0004871!2.13e-19!8;UBERON:0004923!1.92e-15!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;6.20e-64;10!UBERON:0000158;6.20e-64;10!UBERON:0003124;3.13e-54;3!UBERON:0000920;3.13e-54;3!UBERON:0000478;2.72e-47;24!UBERON:0000305;1.33e-23;7!UBERON:0001987;3.26e-19;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,3.39e-81,14;UBERON:0000158,3.39e-81,14;UBERON:0003124,3.01e-64,7;UBERON:0000920,3.13e-54,3;UBERON:0000478,2.56e-47,24;UBERON:0000305,1.33e-23,7;UBERON:0004871,9.50e-21,8;UBERON:0001987,2.98e-19,4;UBERON:0004340,2.98e-19,4;UBERON:0004923,5.13e-17,66 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.0694614258501,0,0,0,0,0,0,0,0,0,3.32870879020994,0.604780586659361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.22468147755661,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.89547764039252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.10367830158997,2.96964680832639,2.15012491469462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179515288819544,0.108647371922008,4.78501739597879,1.09917112082235,3.19820865611181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523813388962845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.4827602647211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0.18378979906969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr12:120724652..120724670,- | |||
}} |
Revision as of 16:15, 11 January 2014
Short description: | p@chr12:120724652..120724670, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:120724652..120724670, - |
Coexpression cluster: | C34_placenta_chorionic_choriocarcinoma_mesothelioma_Wilms_Smooth_bile |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 3.13e-54 | 3 |
extraembryonic cell | 9.61e-46 | 19 |
amnion mesenchymal stem cell | 1.03e-32 | 5 |
placental epithelial cell | 2.32e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 3.39e-81 | 14 |
membranous layer | 3.39e-81 | 14 |
chorion | 3.01e-64 | 7 |
egg chorion | 3.13e-54 | 3 |
extraembryonic structure | 2.56e-47 | 24 |
amnion | 1.33e-23 | 7 |
somatic layer of lateral plate mesoderm | 9.50e-21 | 8 |
placenta | 2.98e-19 | 4 |
allantois | 2.98e-19 | 4 |
organ component layer | 5.13e-17 | 66 |