FFCP PHASE1:Hg19::chr12:123868664..123868734,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=387893 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29489 | |||
|TSSclassifier=strong | |||
|UniProt=F8WC45,Q9NQR1 | |||
|association_with_transcript=0bp_to_ENST00000437519,ENST00000537270,NM_020382,uc001uew.2,uc001uex.2_5end | |||
|description=CAGE_peak_2_at_SETD8_5end | |||
|id=chr12:123868664..123868734,+ | |||
|ontology_enrichment_celltype=CL:0000055!5.31e-14!180;CL:0000548!1.37e-13!679;CL:0000004!1.37e-13!679;CL:0000255!1.37e-13!679;CL:0000012!1.62e-13!682;CL:0000057!9.92e-10!75;CL:0000066!6.09e-08!254;CL:0002620!6.41e-07!23 | |||
|ontology_enrichment_celltype_v019=CL:0002620;5.26e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.21e-09,76;CL:0000066,6.84e-08,253;CL:0002620,6.26e-07,23 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!4.51e-34!235;DOID:14566!8.66e-34!239;DOID:0050686!2.07e-23!137;DOID:0050687!1.37e-14!143;DOID:2531!4.85e-14!51;DOID:0060083!4.85e-14!51;DOID:1240!3.16e-11!39;DOID:305!2.05e-10!106;DOID:8692!8.25e-09!31 | |||
|ontology_enrichment_disease_v019=DOID:1240;6.02e-09;39!DOID:2531;6.83e-09;51!DOID:0060083;6.83e-09;51!DOID:8692;9.10e-09;31 | |||
|ontology_enrichment_disease_v019_2=DOID:162,3.91e-34,235;DOID:14566,7.54e-34,239;DOID:0050686,1.88e-23,137;DOID:0050687,1.29e-14,143;DOID:2531,4.60e-14,51;DOID:0060083,4.60e-14,51;DOID:1240,3.03e-11,39;DOID:305,1.97e-10,106;DOID:8692,8.00e-09,31 | |||
|ontology_enrichment_uberon=UBERON:0003104!7.82e-07!238;UBERON:0009142!7.82e-07!238 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| |||
|short_description=p2@SETD8 | |||
}} |
Revision as of 16:33, 11 January 2014
Short description: | p2@SETD8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SETD8_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000437519, ENST00000537270, NM_020382, uc001uew.2, uc001uex.2_5end |
EntrezGene: | SETD8 |
HGNC: | 29489 |
UniProt: | F8WC45Q9NQR1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.21e-09 | 76 |
epithelial cell | 6.84e-08 | 253 |
skin fibroblast | 6.26e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
cancer | 3.91e-34 | 235 |
disease of cellular proliferation | 7.54e-34 | 239 |
organ system cancer | 1.88e-23 | 137 |
cell type cancer | 1.29e-14 | 143 |
hematologic cancer | 4.60e-14 | 51 |
immune system cancer | 4.60e-14 | 51 |
leukemia | 3.03e-11 | 39 |
carcinoma | 1.97e-10 | 106 |
myeloid leukemia | 8.00e-09 | 31 |