FFCP PHASE1:Hg19::chr12:127614736..127614764,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr12:127614736..127614764,+ | |||
|id=chr12:127614736..127614764,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002573;2.22e-09;2!CL:0002541;5.39e-09;3!CL:0000167;1.05e-07;1!CL:0000164;1.05e-07;1!CL:0000502;1.05e-07;1!CL:0000172;1.05e-07;1!CL:0000173;1.05e-07;1!CL:0002327;4.03e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002573,2.22e-09,2;CL:0002541,4.99e-09,3;CL:0000167,1.06e-07,1;CL:0000164,1.06e-07,1;CL:0000502,1.06e-07,1;CL:0000172,1.06e-07,1;CL:0000173,1.06e-07,1;CL:0002351,1.06e-07,1;CL:0002327,3.97e-07,4 | |||
|ontology_enrichment_development_v019=CL:0002351;1.05e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4430;1.05e-07;1!DOID:5662;1.53e-07;1!DOID:3112;3.96e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,1.06e-07,1;DOID:5662,1.54e-07,1;DOID:3112,4.08e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0003124!6.27e-09!7;UBERON:0005631!3.92e-07!14;UBERON:0000158!3.92e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;5.39e-09;3!UBERON:0000920;5.39e-09;3!UBERON:0001911;4.03e-07;4!UBERON:0002368;5.00e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,4.99e-09,3;UBERON:0003124,2.85e-08,7;UBERON:0002368,1.78e-07,35;UBERON:0000076,2.39e-07,8;UBERON:0000949,3.08e-07,45;UBERON:0001911,3.97e-07,4;UBERON:0005333,3.97e-07,4;UBERON:0008425,3.97e-07,4;UBERON:0005311,3.97e-07,4;UBERON:0005631,5.31e-07,14;UBERON:0000158,5.31e-07,14;UBERON:0002530,9.28e-07,59 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.873765488520689,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,1.77236972004421,0,0,0,0,0,0.100528972411631,0,0.325808305310325,0,1.44331342025273,0,0,0,0,0,0,0,0,0,0,0,0,0,3.31366534000539,7.26584846284905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41849132023278,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0.61642896765115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0,0,0,0,0,0,1.03473071292505,0,0,0,0,0,0,0,0,0,1.66435439510497,0.604780586659361,0,0,0,0,0,0,0,0.925258162815933,0.177561725313127,0.328508624055237,0,0.348631135379878,0,0,0.552485933615378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721287081534056,0,0.165018999841176,0,0,0,0.773365746336976,0,0,0.275673144969061,0.214840489736547,0,0.0852266274161009,0,0,0,0.127612712494584,0,0.464845549297286,0.62962469366128,2.7881490806424,0,0,1.73986598415015,0.9266210955196,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26377536871694,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0.281695602532241,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.847294206991012,0,0,0,0,0,0,0,0,0,0,0,0,1.92283328029452,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.67121139316383,0,0,0,0,25.2670760401996,0,0,0,0,0,0,0,0,0.269605053441981,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.91153644677601,0,0,0,7.01802551410223,0.0915975934018623,1.5991043280559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0,0.063186579628488,0,0,0.664653872707185,0.661983911750998,0.941798755221676,1.19472429772959,0,1.66409607615766,0,0,0,0,0,0.967563312890852,1.82723292715464,0.985385484638511,0,0,0,0,0,0.316553979779393,0,1.04206466326994,0,0,0,0,0,0,0.124252535565433,0,0,0,0,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0,0,2.32991899054908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.575745591958336,0,0,0,0,0,0,0,0,0.170388021785422,0,1.17241786942466,0,1.68067843270016,0,1.53978154095896,0,0,0,0,0,0,0,1.27668251554036,0,0.2506898940227,0.612691153526923,0,0.314108192500469,0,0.122026264901963,0,0,0,0.372578417648301,0,0,0,0,0,0,0,0.149254802886874,0,0,0.757612021100357,1.0062716070103,0,0.686520205190771,0,0.310874401165561,4.58350964967865,0,0.449803112163605,0.155262956876259,0,0.265841714557995,1.5652351854352,0,0,0,0,0,0,0.398095888698616,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0,6.89087669188936,0,0,0,0,0,0,0,0,0,0.327609848846413,0.491545817507439,0.211312123358627,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0.205116364240755,0,0.0691572524642179,0.161475645631851,0,0,0.235939446695481,0.183428598521679,0,0,0,0,0,0.40341013740704,0,0,1.47394725759087,0.295712172434091,0.742913430802341,0,0.206686796501184,0.253663240775627,0,0,0,0,0,0,0,1.21393120847326,0.227662191351298,0.532214220975833,0,5.31612829255997,0.339848664884159,0.0657727735628491,0,0,0,0,0,0,0,0.47775168788705,0,0,0,0,0,0,0,0,0,9.11156405625353,8.60655388067493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.1340915253699,0.196308467114945,0,0.4226557275834,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426467963801962,0,0,0,0.224263725161227,0,0,0,0,0,0.286888821570705,0,0,0,0,0.538951212639521,0,0.122241444182866,0,0,0,0 | |||
|short_description=p@chr12:127614736..127614764,+ | |||
}} |
Revision as of 16:41, 11 January 2014
Short description: | p@chr12:127614736..127614764, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:127614736..127614764, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Schwann cell | 2.22e-09 | 2 |
chorionic membrane mesenchymal stem cell | 4.99e-09 | 3 |
peptide hormone secreting cell | 1.06e-07 | 1 |
enteroendocrine cell | 1.06e-07 | 1 |
type D enteroendocrine cell | 1.06e-07 | 1 |
somatostatin secreting cell | 1.06e-07 | 1 |
pancreatic D cell | 1.06e-07 | 1 |
progenitor cell of endocrine pancreas | 1.06e-07 | 1 |
mammary gland epithelial cell | 3.97e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 4.99e-09 | 3 |
chorion | 2.85e-08 | 7 |
endocrine gland | 1.78e-07 | 35 |
external ectoderm | 2.39e-07 | 8 |
endocrine system | 3.08e-07 | 45 |
mammary gland | 3.97e-07 | 4 |
mammary bud | 3.97e-07 | 4 |
mammary ridge | 3.97e-07 | 4 |
mammary placode | 3.97e-07 | 4 |
extraembryonic membrane | 5.31e-07 | 14 |
membranous layer | 5.31e-07 | 14 |
gland | 9.28e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 1.06e-07 | 1 |
pleomorphic carcinoma | 1.54e-07 | 1 |
papillary adenocarcinoma | 4.08e-07 | 1 |