FFCP PHASE1:Hg19::chr13:34392227..34392254,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5983 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9971 | |||
|TSSclassifier=strong | |||
|UniProt=C9JU95,P40938 | |||
|association_with_transcript=21bp_to_ENST00000434425,NM_002915,NM_181558,uc001uuz.2,uc001uva.2,uc010ted.1_5end | |||
|description=CAGE_peak_2_at_RFC3_5end | |||
|id=chr13:34392227..34392254,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000945;4.88e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,5.81e-07,24;CL:0000826,5.81e-07,24 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!1.88e-37!235;DOID:14566!5.70e-36!239;DOID:0050687!2.67e-20!143;DOID:2531!2.81e-17!51;DOID:0060083!2.81e-17!51;DOID:0050686!1.73e-16!137;DOID:305!1.27e-15!106;DOID:1240!2.19e-13!39;DOID:8692!3.44e-09!31;DOID:3095!9.74e-08!22;DOID:2994!9.74e-08!22 | |||
|ontology_enrichment_disease_v019=DOID:1240;7.44e-12;39!DOID:2531;1.26e-11;51!DOID:0060083;1.26e-11;51!DOID:8692;1.95e-09;31!DOID:3095;1.99e-08;22!DOID:2994;1.99e-08;22!DOID:0060058;9.57e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:162,3.28e-37,235;DOID:14566,4.42e-36,239;DOID:0050687,7.48e-20,143;DOID:2531,2.49e-18,51;DOID:0060083,2.49e-18,51;DOID:0050686,2.47e-16,137;DOID:305,1.74e-15,106;DOID:1240,3.10e-14,39;DOID:8692,8.42e-10,31;DOID:3095,2.72e-08,22;DOID:2994,2.72e-08,22 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001557,9.50e-07,19 | |||
|phase1_expression=0.181678379270557,0.642301571672949,0.563817616383885,0,0,0.872338524100369,0,0.631719873426831,0.261185628199839,2.21160542851358,0,0.873765488520689,0.527533956456907,0.123766352960047,0.331397375727916,0,0,0.730310090387373,0,0.861847406537515,1.83600622119828,0.313454721478088,4.57977579409691,5.88560027813402,6.02604670055053,9.47526231274596,10.0162719128934,11.8853279783656,0.393364276848904,0.767658796194425,1.08371286321253,1.83884244895785,0.6024118375565,0,18.1273249357906,3.9807385096478,4.11040615068786,0.553995408531877,0.601633342410425,0.868043482863407,0.447830948479849,0.971680998056939,1.80302897343931,0.145398238779565,0.755751887377619,0.970336244751265,0.232429036905685,0.411167888021826,0.619412741790207,0,0.256160706529101,0.709446689665756,0.344745680736619,1.29096936716765,0,0.376484679085209,0.272906150057846,0.898893937780338,0.306083892370903,0.641858054152187,0,0,0.199463657621632,0.852449501065388,0,0,0,0.75374599577023,0,0.65156653411535,0,0,0.316462387440884,2.32380814943136,1.4882300997553,1.04829322754188,0.786300418025466,1.35159203557356,1.28580469357664,0.855038231223746,1.39241674039363,0.730656615058536,3.51992488922645,3.27683166757279,1.77901850772711,1.28019066769952,2.80277190925209,2.87376219977242,4.62731410949403,2.86216126360609,1.1384259382189,2.93618594685469,1.14681968437569,2.64342657158052,0,6.32121803460185,0.786839080455332,0.786021525498329,0.822405995998037,2.17342444007882,3.58514493296949,2.36723902867367,0,1.55974639639243,1.76763544484902,2.65840673500345,1.35401931882508,2.30564375506215,2.21100890851793,3.61763390128087,1.93445012450094,2.60822777161547,0.444859689486181,1.60524496853828,0,3.39928028092699,0.766440987203842,1.03088233644789,2.78321661221453,1.91139248594458,0,1.90090408889675,0.451725357233318,2.04778577847069,2.49861453104692,0.947109008176067,0,0.604820229674197,0.267440195783507,1.30341963494519,0,2.01210257911091,1.2786256184353,1.80719576192283,0,0.579386075843295,0.795285947051099,1.45990461090791,3.21418378357831,1.10864698731282,1.14185221401064,2.94702919869853,2.18577172975525,1.85392221392215,0.324547393654683,0.348259474598534,0.26591592103773,0.715471872916026,1.71598473234038,1.48583000531826,0.993812036833525,0,0,0,0.838998872419812,2.20094433552054,1.25396979922086,0.516833518338658,1.42306505074684,0.66944122552934,1.20848795132744,0.760272105718513,0.732186172644509,1.10298924103761,0,3.12549048994279,3.81699933464489,4.16662477788292,1.53316637465883,0.949265659568129,1.64881569537367,2.63560834872127,0,0,0.496971951695318,1.13967460498122,0.264818361626438,1.72101972449288,1.77334191099179,0.560677600142307,0,0.49333509683432,0.933633106199299,0.942974704487816,3.75962377160955,0.756787138224657,0,0.468642863667593,0.624320153660641,1.71141546463335,1.04614076386261,7.75067691048848,7.60802838530218,4.07307339436521,1.63323337003915,6.26455018290017,0.723280468230358,2.37600571456411,2.22540236350701,0.910161361938026,0,8.41680569770331,6.75640007308606,2.21651292387346,0,0.919463387397059,0.751190294532984,2.83580457900053,1.97328599257748,0.213557388818567,0.635795703478686,3.00091096084402,2.26715564324566,0.257640540045629,0.18611685633159,4.05063197379039,2.63079913935236,1.26216887122057,0.276149695926898,0.646584227275248,0.710019185033229,2.51880245569101,2.03472710772585,1.35282597214308,1.09098448236334,0.860413786167011,5.85473789422058,5.03613119621644,4.06678800043314,7.67091807113741,5.55105871926382,6.93456982244077,0,0.643240938192885,0,0,0,6.62518080223126,8.09206512374888,7.23033089650446,6.50734439121124,5.44698610231015,7.59265981155509,7.01122802432855,6.86775127938711,5.77120735419586,0.738155454624648,0,0,1.47008711385542,1.26755034821831,0,1.77236972004421,13.2438929824395,1.96781501668982,1.88724591328378,0.329250856225877,0,3.41798506199545,2.31471112896324,1.3032332212413,0,0,1.85488647960123,0.587043471179108,1.29929802984966,0.462985512576611,0.570762456703795,2.37061319387782,0.858486162094873,0.738651018262192,1.63802985597466,1.0404181360211,2.81201501960331,1.00789276919316,0.992425680696705,2.95543124919399,6.39394664730716,2.68367875415648,0.985326475791887,1.49682337822484,1.24396869324463,0.720599767084807,1.00993946741104,6.47678521780124,1.52795370223311,0,1.71072446022705,6.78661451841935,2.70308752059526,2.00078502841405,2.13049060256185,1.30788020649984,4.5469737208989,0,0,5.917119267892,0.531876233169741,1.04007436911366,1.80045161983499,0,1.8649552531127,0.428933980974443,0,1.64648067356154,4.56030658011229,0,3.16780749173372,0.301439377059586,0,0.599837947092342,0,0.502257091432126,0,0.958499421966331,0,5.70547620162874,1.59259437334337,0.821905290201534,1.96967059563885,6.164682919644,0.394061520403854,0.215627574859517,1.02674429023799,2.7950408664471,5.20559415430487,3.86644406388848,3.18280904135263,2.55175500661265,3.74503511973591,2.99161459204025,0.828831026872071,0.12269149171914,0,0,0.415941723061614,0.535286966391485,0.315404830067869,1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| |||
|short_description=p2@RFC3 | |||
}} |
Revision as of 17:18, 11 January 2014
Short description: | p2@RFC3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RFC3_5end |
Coexpression cluster: | NA |
Association with transcript: | 21bp_to_ENST00000434425, NM_002915, NM_181558, uc001uuz.2, uc001uva.2, uc010ted.1_5end |
EntrezGene: | RFC3 |
HGNC: | 9971 |
UniProt: | C9JU95P40938 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 5.81e-07 | 24 |
pro-B cell | 5.81e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
upper respiratory tract | 9.50e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
cancer | 3.28e-37 | 235 |
disease of cellular proliferation | 4.42e-36 | 239 |
cell type cancer | 7.48e-20 | 143 |
hematologic cancer | 2.49e-18 | 51 |
immune system cancer | 2.49e-18 | 51 |
organ system cancer | 2.47e-16 | 137 |
carcinoma | 1.74e-15 | 106 |
leukemia | 3.10e-14 | 39 |
myeloid leukemia | 8.42e-10 | 31 |
germ cell and embryonal cancer | 2.72e-08 | 22 |
germ cell cancer | 2.72e-08 | 22 |