FFCP PHASE1:Hg19::chr14:71276610..71276625,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=weak | |||
|UniProt= | |||
|association_with_transcript=-296bp_to_ENST00000554032_5end | |||
|coexpression_cluster_id=C186 | |||
|description=CAGE_peak_2_at_ENST00000554032_5end | |||
|id=chr14:71276610..71276625,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.53e-28!254;CL:0002076!8.58e-12!43;CL:0000223!4.11e-09!59;CL:0002368!5.16e-07!13;CL:0002251!7.14e-07!21 | |||
|ontology_enrichment_celltype_v019=CL:0002368;1.02e-14;13!CL:0002681;1.91e-10;12!CL:0002584;1.91e-10;12!CL:1000449;2.24e-10;15!CL:1000507;6.98e-10;10!CL:1000494;6.98e-10;10!CL:0000244;5.06e-09;4!CL:0000731;5.06e-09;4!CL:1000497;6.23e-09;17!CL:0002518;6.23e-09;17!CL:0002076;1.32e-08;42!CL:0002202;2.53e-08;9!CL:0002632;2.53e-08;9!CL:0000307;2.79e-07;3!CL:0000239;7.33e-07;3!CL:1000615;7.33e-07;3!CL:0002306;7.33e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.22e-20,253;CL:0002368,5.28e-15,13;CL:0002076,3.82e-12,42;CL:0002681,1.57e-10,12;CL:0002584,1.57e-10,12;CL:1000449,1.73e-10,15;CL:1000507,3.38e-10,10;CL:1000494,3.38e-10,10;CL:0000244,4.02e-09,4;CL:0000731,4.02e-09,4;CL:1000497,4.98e-09,17;CL:0002518,4.98e-09,17;CL:0002202,1.47e-08,9;CL:0002632,1.47e-08,9;CL:0000223,1.66e-08,58;CL:0000239,2.26e-07,3;CL:1000615,2.26e-07,3;CL:0002306,2.26e-07,3;CL:0000068,3.06e-07,3;CL:0000069,3.06e-07,3;CL:0000307,3.06e-07,3;CL:0000377,3.06e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000377;2.79e-07;3 | |||
|ontology_enrichment_disease=DOID:305!2.86e-19!106;DOID:0050687!5.21e-19!143;DOID:162!3.24e-15!235;DOID:14566!4.84e-15!239;DOID:1749!4.16e-10!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.38e-13;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,4.26e-14,14;DOID:305,2.94e-09,106;DOID:0050687,7.79e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0000924!4.68e-13!173;UBERON:0006601!4.68e-13!173;UBERON:0004121!1.00e-12!169;UBERON:0000153!1.21e-12!129;UBERON:0007811!1.21e-12!129;UBERON:0000033!1.52e-12!123;UBERON:0000064!7.81e-12!219;UBERON:0002346!1.29e-10!90;UBERON:0003075!2.39e-10!86;UBERON:0007284!2.39e-10!86;UBERON:0001049!2.55e-10!57;UBERON:0005068!2.55e-10!57;UBERON:0006241!2.55e-10!57;UBERON:0007135!2.55e-10!57;UBERON:0003056!2.88e-10!61;UBERON:0001017!6.75e-10!82;UBERON:0000073!1.43e-09!94;UBERON:0001016!1.43e-09!94;UBERON:0000955!2.04e-09!69;UBERON:0006238!2.04e-09!69;UBERON:0005743!5.02e-09!86;UBERON:0002616!1.07e-08!59;UBERON:0004119!2.05e-08!169;UBERON:0000925!2.05e-08!169;UBERON:0006595!2.05e-08!169;UBERON:0002780!2.20e-08!41;UBERON:0001890!2.20e-08!41;UBERON:0006240!2.20e-08!41;UBERON:0003080!6.07e-08!42;UBERON:0001869!4.54e-07!32 | |||
|ontology_enrichment_uberon_v019=UBERON:0006554;6.02e-11;30!UBERON:0001008;6.02e-11;30!UBERON:0001225;1.91e-10;12!UBERON:0008987;1.91e-10;12!UBERON:0006555;2.24e-10;15!UBERON:0004819;2.24e-10;15!UBERON:0001285;2.24e-10;15!UBERON:0007684;2.24e-10;15!UBERON:0001851;3.86e-10;15!UBERON:0004211;6.98e-10;10!UBERON:0009773;6.98e-10;10!UBERON:0001231;6.98e-10;10!UBERON:0004810;6.98e-10;10!UBERON:0000353;4.73e-08;15!UBERON:0002294;1.28e-07;7!UBERON:0001173;1.28e-07;7!UBERON:0000365;3.34e-07;5!UBERON:0002113;3.67e-07;24!UBERON:0011143;3.67e-07;24!UBERON:0006853;7.33e-07;3!UBERON:0007685;7.33e-07;3!UBERON:0004134;7.33e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001225,1.57e-10,12;UBERON:0008987,1.57e-10,12;UBERON:0004211,1.73e-10,15;UBERON:0009773,1.73e-10,15;UBERON:0001231,1.73e-10,15;UBERON:0001285,1.73e-10,15;UBERON:0007684,1.73e-10,15;UBERON:0004208,1.73e-10,15;UBERON:0001851,2.10e-10,15;UBERON:0004810,3.38e-10,10;UBERON:0006555,1.03e-09,16;UBERON:0004819,1.03e-09,16;UBERON:0006554,2.17e-09,47;UBERON:0001008,4.18e-09,48;UBERON:0000353,4.05e-08,15;UBERON:0006853,2.26e-07,3;UBERON:0007685,2.26e-07,3;UBERON:0004134,2.26e-07,3;UBERON:0000365,2.79e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,4.88460817580699,0.873765488520689,0.527533956456907,0,0,0,0,0,0,0.492484232307152,0,0.313454721478088,0.286235987131057,0.273748850145768,0.502170558379211,0.764134057479513,0.656804715599566,1.10195093839151,0,0,0,1.83884244895785,0.90361775633475,1.47901604066715,1.31694240986513,1.13735385989937,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400395987036012,0.574752439954483,0,0,0,0,0,0,0,0,0.196709770113833,0,0.205601498999509,0,0,0,0,0.334231370655521,0.294605907474837,0,0.541607727530031,0.128091319725675,0.130059347559878,0.328875809207352,0.552700035571697,0,0,0.267540828089713,0,0.113309342697566,0,0,0.253019692019503,0.318565414324097,0,0,0.150575119077773,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.945348171640679,0.886917589850256,0.614843499851882,0.130979075497713,1.82147644146271,0.741568885568859,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0.368502951935304,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.12586938479627,0.818238361772504,1.14721838155602,0.609868530647977,0.397589304964456,0.580969714347592,0.829288440122964,1.00928340350251,0.36497735907583,0,0,0,0,0,0.236613600079688,0,0,0.220587945464788,0,0,0.269662616320329,0,0,0,0,0.8231480226628,0,0,0,0,1.32438929824395,0.614942192715568,0.857839051492628,0.329250856225877,0,0.301586917234893,0.462942225792648,0,1.03993478527958,1.44331342025273,0.695582429850461,0.234817388471643,0,0,0,0.790204397959275,1.71697232418975,0,0,0,0,1.17587489739202,1.13420077793909,3.85101647622248,2.61570544662566,0.766765358330422,0,0,0,0,0,0.063497894292169,0,1.17217447210047,0,0,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.791951872933429,0.904318131178758,0,0.499864955910285,0,0,0,0,0,0,0,0,0,0.448340575974109,0,0,0.128343036279748,0,0,0,1.17261385734044,0,0,0,0,0,0,0,0.207970861530807,0,0.157702415033935,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0.606255142892519,0,0.604780586659361,0,0,0,0,0,0,0,0,0,0,0,0,0.604297247958111,1.60405176242628,4.14364450211533,0,0,0,2.25599806453706,1.5403067420883,0.784349769176855,2.92278449306521,0.422206515571503,0,0,1.0795795805107,0,1.08378575017541,0.501689773854853,1.78413391131527,1.66215201785745,1.34324852833307,0,0,0,0,0,0.103041011647722,0,0,0.574265537996172,0.650060246036521,0,0,0,0,0,0,0,0.170453254832202,0,1.32227932288782,1.53752053892085,1.27612712494584,1.31505115112215,0,0,0,0,0,0,0,0,0,0.316379424718726,0.190630193923825,0,0,0,0,0.359744915166629,0,0.353437207037059,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717056761020258,0,0,1.06428319221179,0,0,0,0,1.53955380360819,2.68120910214315,1.08890984861323,0.0941438007767792,2.58303223602738,1.68471475667626,1.33029046061003,1.1486170010348,0,0,0,0,0,0,0,0,0.640944426764839,0,1.96032172784825,0.929015875628594,0.721346064882224,0.355709216742071,0.797131363644112,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08182271390393,0,0,0.37428108081644,0,1.94176834799221,0.222886768554957,0,0,0,0.307160702099232,0,0.984685914873589,0.556543525114529,0.16480387422676,0.844501632511974,0,0.552567831062295,0.503865495708552,0,0,0,1.70749867179921,1.07412704805365,0,0,0,0,1.93866549219044,0.556608588971108,0,1.30213880542617,1.04951999995435,0,1.2517279311405,2.2882828526349,0.472775363535873,1.37897349296586,1.16641845353302,0.520874984799877,1.77148277162768,0.60298219312704,1.52581736317083,0.221158519862449,0,0,0.544692317594951,0.557694977114413,0.0769502585037971,0,0.69169171316418,0.628303510868405,0.651884231532048,0,0.0915975934018623,0,0,0,0,0.225595660617181,0,0.167821586975843,0,0,1.47698645169619,1.63232808159148,0.565412285735763,1.08194319871046,0.995261931078505,0,0,0,0,0.104421949505455,0.067401132980677,0,0.234264445725339,0.182454789215666,0.19566461893209,0.242780379534093,0,0,0.61214552326098,0,1.35291077473043,0.518440956986236,0,0.330991955875499,0.627865836814451,0,0.569219092059585,0,0,2.35181753794506,1.39294730528644,0,0.343972064943233,0.290268993867255,0.584714536689484,0.246346371159628,0.387956065953678,0,0.451961481561065,1.64450309576101,0.19871461170299,0.569797163602908,1.17330829640882,1.12222348352147,0,0.599428828746391,0.288180834308212,0.458146384663663,0.171594997861965,1.29649318189335,0.49701014226173,0,0,0.209205692624666,0,0.577901179803038,0.600420288709789,0.273810757783986,0,0,0,0,0,0,0.199679000498991,0,0.223171457441873,0,0,0,1.10296455230113,0.576911008668165,0.674035438541849,0.393709926058995,2.11683330164461,1.59045937961861,0,1.76828463311521,2.06309154895851,1.66176135211674,0,0,0.303747783290123,1.0063040627978,0.157611414598396,0,0,0.179287339332845,1.15149118391667,0,0,0,0,0,0,1.19730191562487,0.082092520749339,0,1.01980882368113,0,0,0.646414781807753,0.13223260174269,0.855434189421647,0,0,0.314408610199332,0,0,0.395223263795889,0.730755590285376,0.638341257770182,0,0,0,0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| |||
|short_description=p2@ENST00000554032 | |||
}} |
Revision as of 20:51, 11 January 2014
Short description: | p2@ENST00000554032 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ENST00000554032_5end |
Coexpression cluster: | C186_squamous_papillotubular_large_Tracheal_oral_Small_epidermoid |
Association with transcript: | -296bp_to_ENST00000554032_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.22e-20 | 253 |
respiratory epithelial cell | 5.28e-15 | 13 |
endo-epithelial cell | 3.82e-12 | 42 |
kidney cortical cell | 1.57e-10 | 12 |
renal cortical epithelial cell | 1.57e-10 | 12 |
epithelial cell of nephron | 1.73e-10 | 15 |
kidney tubule cell | 3.38e-10 | 10 |
nephron tubule epithelial cell | 3.38e-10 | 10 |
transitional epithelial cell | 4.02e-09 | 4 |
urothelial cell | 4.02e-09 | 4 |
kidney cell | 4.98e-09 | 17 |
kidney epithelial cell | 4.98e-09 | 17 |
epithelial cell of tracheobronchial tree | 1.47e-08 | 9 |
epithelial cell of lower respiratory tract | 1.47e-08 | 9 |
endodermal cell | 1.66e-08 | 58 |
brush border epithelial cell | 2.26e-07 | 3 |
kidney cortex tubule cell | 2.26e-07 | 3 |
epithelial cell of proximal tubule | 2.26e-07 | 3 |
duct epithelial cell | 3.06e-07 | 3 |
branched duct epithelial cell | 3.06e-07 | 3 |
tracheal epithelial cell | 3.06e-07 | 3 |
tracheoblast | 3.06e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
cortex of kidney | 1.57e-10 | 12 |
renal parenchyma | 1.57e-10 | 12 |
nephron epithelium | 1.73e-10 | 15 |
renal tubule | 1.73e-10 | 15 |
nephron tubule | 1.73e-10 | 15 |
nephron | 1.73e-10 | 15 |
uriniferous tubule | 1.73e-10 | 15 |
nephrogenic mesenchyme | 1.73e-10 | 15 |
cortex | 2.10e-10 | 15 |
nephron tubule epithelium | 3.38e-10 | 10 |
excretory tube | 1.03e-09 | 16 |
kidney epithelium | 1.03e-09 | 16 |
urinary system structure | 2.17e-09 | 47 |
renal system | 4.18e-09 | 48 |
parenchyma | 4.05e-08 | 15 |
renal cortex tubule | 2.26e-07 | 3 |
region of nephron tubule | 2.26e-07 | 3 |
proximal tubule | 2.26e-07 | 3 |
urothelium | 2.79e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 4.26e-14 | 14 |
carcinoma | 2.94e-09 | 106 |
cell type cancer | 7.79e-07 | 143 |