FFCP PHASE1:Hg19::chr15:65935239..65935275,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9187 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10975 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000449142,NM_001254740,uc010uji.1_5end | |||
|coexpression_cluster_id=C357 | |||
|description=CAGE_peak_6_at_SLC24A1_5end | |||
|id=chr15:65935239..65935275,+ | |||
|ontology_enrichment_celltype=CL:0002139!6.31e-19!24;CL:0000071!1.72e-15!18;CL:0002546!1.72e-15!18;CL:0000115!1.19e-12!35;CL:0000213!2.89e-10!57;CL:0000215!2.89e-10!57;CL:0002078!6.28e-09!44;CL:1000413!1.40e-08!9;CL:0000076!1.93e-08!62;CL:0002544!1.59e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002144;5.07e-29;3!CL:0002139;1.75e-23;24!CL:0000071;3.87e-18;18!CL:0000115;4.19e-12;36!CL:0002078;3.01e-10;45!CL:0002544;4.87e-07;6!CL:0002138;6.88e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002144,5.09e-29,3;CL:0002139,1.34e-23,24;CL:0000071,3.24e-18,18;CL:0002546,3.24e-18,18;CL:0000115,2.06e-15,36;CL:0002078,3.95e-12,45;CL:0000213,3.50e-09,58;CL:0000215,3.50e-09,58;CL:0002544,4.26e-07,6;CL:0005020,6.29e-07,6;CL:0002138,6.29e-07,6;CL:0005022,6.29e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002546;3.87e-18;18!UBERON:0001045;2.62e-10;1!CL:0005022;6.88e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.94e-21!115;UBERON:0001986!1.72e-15!18;UBERON:0004638!1.72e-15!18;UBERON:0004852!1.72e-15!18;UBERON:0000487!6.44e-12!22;UBERON:0006914!5.22e-10!25;UBERON:0000467!1.32e-09!625;UBERON:0000480!1.54e-09!626;UBERON:0004111!1.86e-09!241;UBERON:0000477!2.60e-09!286;UBERON:0000055!5.67e-09!69;UBERON:0000468!1.25e-08!659;UBERON:0003915!1.40e-08!9;UBERON:0004700!1.40e-08!9;UBERON:0001917!1.40e-08!9;UBERON:0002046!1.57e-08!5;UBERON:0004117!1.57e-08!5;UBERON:0007689!1.57e-08!5;UBERON:0007123!1.57e-08!5;UBERON:0003091!1.57e-08!5;UBERON:0002465!1.40e-07!10;UBERON:0002049!5.69e-07!79;UBERON:0007798!5.69e-07!79 | |||
|ontology_enrichment_uberon_v019=UBERON:0010523;5.07e-29;3!UBERON:0001915;5.07e-29;3!UBERON:0001982;5.07e-29;3!UBERON:0004638;3.87e-18;18!UBERON:0001986;3.87e-18;18!UBERON:0004852;3.87e-18;18!UBERON:0000487;9.12e-15;22!UBERON:0006914;6.08e-13;25!UBERON:0002426;1.13e-10;1!UBERON:0003831;1.13e-10;1!UBERON:0003898;1.13e-10;1!UBERON:0004830;1.13e-10;1!UBERON:0003830;1.13e-10;1!UBERON:0005175;1.13e-10;1!UBERON:0001774;1.13e-10;1!UBERON:0001103;1.13e-10;1!UBERON:0006834;2.62e-10;1!UBERON:0001154;2.62e-10;1!UBERON:0001153;2.62e-10;1!UBERON:0009854;2.62e-10;1!UBERON:0000490;1.30e-08;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010523,5.09e-29,3;UBERON:0001915,5.09e-29,3;UBERON:0001982,5.09e-29,3;UBERON:0004638,3.24e-18,18;UBERON:0001986,3.24e-18,18;UBERON:0004852,3.24e-18,18;UBERON:0000487,7.89e-15,22;UBERON:0006914,5.36e-13,25;UBERON:0002426,1.08e-10,1;UBERON:0003831,1.08e-10,1;UBERON:0003898,1.08e-10,1;UBERON:0004830,1.08e-10,1;UBERON:0003830,1.08e-10,1;UBERON:0005175,1.08e-10,1;UBERON:0001774,1.08e-10,1;UBERON:0001103,1.08e-10,1;UBERON:0010084,1.08e-10,1;UBERON:0006834,3.01e-10,1;UBERON:0001154,3.96e-10,1;UBERON:0001153,3.96e-10,1;UBERON:0001045,3.96e-10,1;UBERON:0000055,1.11e-07,68 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,5.16782259153433,0,0.694281003215189,0.56530794192401,0.419499436209906,0.275118041940067,0,0,0,0.66944122552934,8.86224497640123,13.6848979029332,15.3759096255347,1.83831540172934,0.81014194788176,0.17859945656816,0.22452937262617,0.337834441449967,0,0,1.46561395144326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.910161361938026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15956511897978,0.818238361772504,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0.402115889646523,0.0925884451585296,0,0,0,0,0,1.58803092537181,1.38895653772983,0.761016608938393,0,0,0,0,0,1.87467667973554,0.335964256397719,0.283550194484773,0.268675568108545,2.3250715081117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.499864955910285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.519254429183621,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340187410553031,0.431831832204279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574265537996172,1.30012049207304,0,0,0,0,0,0,0,0,0,0.330569830721956,1.34533047155574,0.893288987462089,0,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288666338176536,0,1.08890984861323,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333926115068718,0,0,0.796991953004279,1.10513566212459,0,0,0,0,0,0,0,0.493217028184668,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0.219385397153973,0,0,0.384751292518985,0,0,0,0,0.638002319463839,0,4.26427820814908,0,0,0,0,0,0,0,0,0,0,0,0,0,0.530745387020035,0.611030144933625,0,0,0,0.067401132980677,3.21031058919516,0.937057782901357,0,0,0,0.394584402849391,0,0,0.252746318513952,0,0,0.664653872707185,0,0.627865836814451,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.193978032976839,0,0.225980740780532,0.137041924646751,0.19871461170299,0.189932387867636,0,0,0.640358984218058,0,0,0,0,0.14405479798815,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0.558564802544508,0.229160424011684,0,0.199679000498991,0,0.446342914883745,0.0671834724867263,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242998226632099,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0.864221491201268,0,0,0,0,0.113312091520126,0,0,0.517131825446202,0,0,0,0.320362237703084,0.78602152549833,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0.244052529803926,0.1251909307065,0,0,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147855149989634,0.159296767163702,0,0,0,0,0,0,0,0,0,0.644463342254931,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0.964570191354574,0.506827321959218,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0.478901577171454,0.205116364240755,0,0.0691572524642179,0.322951291263702,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0.327543835020193,0,0.270150338473579,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0.620916591138472,0,0,0.271878931907327,0.0657727735628491,0,0,0.313972371402056,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0.430227358820278,0,0,0.846774100381858,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0.603851374266694,0.385870790539723,0.437119121007915,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0.730336388246517,0,0,0,0,0.436350690340377,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,1.90451545170992,0,0.124149428591716,0.672791175483681,0.954707374172474,3.03175783437329,0.653150243690884,0.342233301085281,0.202056159043763,0.502055437748735,1.66330178273007,0,0,0,0,0,1.34465588601153,0.813792356631477,0,0.805095174364105,0 | |||
|short_description=p6@SLC24A1 | |||
}} |
Revision as of 00:08, 12 January 2014
Short description: | p6@SLC24A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_SLC24A1_5end |
Coexpression cluster: | C357_Endothelial_Lymphatic_Renal_Hepatic_seminal_breast_heart |
Association with transcript: | 0bp_to_ENST00000449142, NM_001254740, uc010uji.1_5end |
EntrezGene: | SLC24A1 |
HGNC: | 10975 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
capillary endothelial cell | 5.09e-29 | 3 |
endothelial cell of vascular tree | 1.34e-23 | 24 |
blood vessel endothelial cell | 3.24e-18 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.24e-18 | 18 |
endothelial cell | 2.06e-15 | 36 |
meso-epithelial cell | 3.95e-12 | 45 |
lining cell | 3.50e-09 | 58 |
barrier cell | 3.50e-09 | 58 |
aortic endothelial cell | 4.26e-07 | 6 |
lymphangioblast | 6.29e-07 | 6 |
endothelial cell of lymphatic vessel | 6.29e-07 | 6 |
vascular lymphangioblast | 6.29e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
microcirculatory vessel | 5.09e-29 | 3 |
endothelium of capillary | 5.09e-29 | 3 |
capillary | 5.09e-29 | 3 |
blood vessel endothelium | 3.24e-18 | 18 |
endothelium | 3.24e-18 | 18 |
cardiovascular system endothelium | 3.24e-18 | 18 |
simple squamous epithelium | 7.89e-15 | 22 |
squamous epithelium | 5.36e-13 | 25 |
chest muscle | 1.08e-10 | 1 |
respiratory system muscle | 1.08e-10 | 1 |
skeletal muscle of trunk | 1.08e-10 | 1 |
respiratory system skeletal muscle | 1.08e-10 | 1 |
thoracic segment muscle | 1.08e-10 | 1 |
chest organ | 1.08e-10 | 1 |
muscle of trunk | 1.08e-10 | 1 |
diaphragm | 1.08e-10 | 1 |
future diaphragm | 1.08e-10 | 1 |
uterus or analog | 3.01e-10 | 1 |
vermiform appendix | 3.96e-10 | 1 |
caecum | 3.96e-10 | 1 |
midgut | 3.96e-10 | 1 |
vessel | 1.11e-07 | 68 |