FFCP PHASE1:Hg19::chr15:96607564..96607575,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=79bp_to_ENST00000558860_5end | |||
|coexpression_cluster_id=C224 | |||
|description=CAGE_peak_2_at_ENST00000558860_5end | |||
|id=chr15:96607564..96607575,- | |||
|ontology_enrichment_celltype=CL:0000313!3.31e-09!1;CL:0002563!5.12e-09!4;CL:0002574!8.49e-09!1 | |||
|ontology_enrichment_celltype_v019=CL:0002563;3.31e-40;4!CL:0002253;5.70e-21;2!CL:0002231;2.09e-14;3!CL:0002076;1.05e-09;42!CL:0002251;6.17e-09;20!CL:0000039;5.38e-07;7!CL:0000586;5.38e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,3.31e-40,4;CL:0002253,5.70e-21,2;CL:0002231,2.09e-14,3;CL:0002076,2.90e-09,42;CL:0002251,6.17e-09,20;CL:0000039,5.38e-07,7;CL:0000586,5.38e-07,7;CL:0000223,6.54e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2152!3.31e-09!1 | |||
|ontology_enrichment_disease_v019=DOID:4468;3.11e-21;2!DOID:299;2.28e-07;25 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,3.11e-21,2;DOID:299,2.28e-07,25 | |||
|ontology_enrichment_uberon=UBERON:0004911!3.31e-09!1;UBERON:0001242!5.12e-09!4;UBERON:0001262!5.12e-09!4;UBERON:0004786!5.12e-09!4;UBERON:0004808!5.12e-09!4;UBERON:0001277!5.12e-09!4;UBERON:0006834!6.22e-09!1;UBERON:0003350!2.24e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0001242;3.31e-40;4!UBERON:0001262;3.31e-40;4!UBERON:0004786;3.31e-40;4!UBERON:0004808;3.31e-40;4!UBERON:0001277;3.31e-40;4!UBERON:0000485;1.61e-23;7!UBERON:0003929;1.61e-23;7!UBERON:0003350;9.92e-21;8!UBERON:0001052;3.42e-11;4!UBERON:0000160;8.11e-10;17!UBERON:0004907;3.22e-09;5!UBERON:0000344;6.17e-09;20!UBERON:0005409;6.75e-08;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001242,3.31e-40,4;UBERON:0001262,3.31e-40,4;UBERON:0004786,3.31e-40,4;UBERON:0004808,3.31e-40,4;UBERON:0001277,3.31e-40,4;UBERON:0003350,9.92e-21,8;UBERON:0000485,1.48e-18,9;UBERON:0001052,3.42e-11,4;UBERON:0000160,8.11e-10,17;UBERON:0001046,2.56e-09,19;UBERON:0004907,3.22e-09,5;UBERON:0000344,6.17e-09,20;UBERON:0003929,2.27e-07,54;UBERON:0005409,4.28e-07,25 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.411491295897,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.69203229428271,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.9169171316418,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,9.30427006507142,2.40300221437699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157611414598396,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223710863595585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p2@ENST00000558860 | |||
}} |
Revision as of 01:26, 12 January 2014
Short description: | p2@ENST00000558860 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ENST00000558860_5end |
Coexpression cluster: | C224_clear_serous_pleomorphic_choriocarcinoma_mesothelioma_amniotic_renal |
Association with transcript: | 79bp_to_ENST00000558860_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 3.31e-40 | 4 |
epithelial cell of large intestine | 5.70e-21 | 2 |
epithelial cell of prostate | 2.09e-14 | 3 |
endo-epithelial cell | 2.90e-09 | 42 |
epithelial cell of alimentary canal | 6.17e-09 | 20 |
germ line cell | 5.38e-07 | 7 |
germ cell | 5.38e-07 | 7 |
endodermal cell | 6.54e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
intestinal mucosa | 3.31e-40 | 4 |
wall of intestine | 3.31e-40 | 4 |
gastrointestinal system mucosa | 3.31e-40 | 4 |
gastrointestinal system epithelium | 3.31e-40 | 4 |
intestinal epithelium | 3.31e-40 | 4 |
epithelium of mucosa | 9.92e-21 | 8 |
simple columnar epithelium | 1.48e-18 | 9 |
rectum | 3.42e-11 | 4 |
intestine | 8.11e-10 | 17 |
hindgut | 2.56e-09 | 19 |
lower digestive tract | 3.22e-09 | 5 |
mucosa | 6.17e-09 | 20 |
gut epithelium | 2.27e-07 | 54 |
gastrointestinal system | 4.28e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 3.11e-21 | 2 |
adenocarcinoma | 2.28e-07 | 25 |