FFCP PHASE1:Hg19::chr17:38556243..38556260,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C2405 | |||
|description=CAGE_peak_at_chr17:38556243..38556260,- | |||
|id=chr17:38556243..38556260,- | |||
|ontology_enrichment_celltype=CL:0000066!3.08e-09!254;CL:0000133!6.24e-09!59;CL:0000548!1.21e-08!679;CL:0000004!1.21e-08!679;CL:0000255!1.21e-08!679;CL:0000012!2.71e-08!682;CL:0000333!4.97e-08!41;CL:0000221!7.12e-07!71 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,7.00e-07,25 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!7.91e-50!239;DOID:162!1.39e-49!235;DOID:0050687!2.47e-27!143;DOID:0050686!1.21e-19!137;DOID:305!1.37e-19!106;DOID:2531!9.74e-17!51;DOID:0060083!9.74e-17!51;DOID:1240!7.79e-13!39;DOID:8692!2.84e-08!31 | |||
|ontology_enrichment_disease_v019=DOID:1325;4.00e-08;7!DOID:3904;4.00e-08;7!DOID:154;6.03e-08;2!DOID:4236;6.03e-08;2!DOID:3910;1.53e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.29e-20,235;DOID:14566,5.87e-20,239;DOID:305,3.85e-12,106;DOID:0050687,3.17e-11,143;DOID:0050686,5.36e-09,137;DOID:154,3.44e-08,2;DOID:4236,3.44e-08,2;DOID:1325,3.86e-08,7;DOID:3904,3.86e-08,7;DOID:3910,1.27e-07,2;DOID:2531,6.76e-07,51;DOID:0060083,6.76e-07,51 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0004903;1.53e-07;2!UBERON:0002173;1.53e-07;2!UBERON:0002186;1.53e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,1.27e-07,2;UBERON:0002173,1.27e-07,2;UBERON:0002186,1.27e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0.123121058076788,0,0,1.14494394852423,1.50561867580173,0.627713197974014,1.22261449196722,0.821005894499457,0.708397031823113,0,0,0,0,0,0,0.697204805222715,0.853015394924529,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0.986627427622057,0.552700035571697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.12786256184353,0,0,0.289693037921647,0,0,0.0945348171640679,0.443458794925128,0.43917392846563,0,0,0,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0,0,0,0,0,0,0,0,0,0,0.267899184852239,0,0.225222960966644,0,0,0.183201743930407,0,0,0,0,0.12663051166458,0,0,1.06400514659507,0,0,0.24666754841716,0,0.134710672069688,0.326923806226917,0,0,0,0,0,0,0.23486899728753,0.161872944368132,0,0,0.859840221182376,0,0,0,0,0,0.673344455816265,0.125118519871964,0,0,0,0,0.226864366320042,0.358779271377724,0,0,0.600182192168805,0.103052529238439,0.257640540045629,0,0.675105328965065,0,0,0,0,0,0.302256294682921,0.339121184620975,0,0,0,0.853815942907168,0.132529768321485,0.580969714347592,0.932949495138334,0.504641701751257,0,0,0.643240938192885,0,0,0,0.591534000199219,1.01150814046861,0.241011029883482,0.772057809126758,0.653638332277218,0.474541238222193,0.808987848960987,0.588664395376038,1.53898862778556,0,0,0,0,0,0,0,0.441463099414651,0.122988438543114,0.171567810298526,0,0,0.301586917234893,0.277765335475589,0,0,0,0.115930404975077,0,0,0,0.380508304469197,0,0,0,0,0.148631162288728,0,0.16798212819886,0,0.179117045405697,0.581267877027924,0.383382679165211,0,0,0,0,0,0.317489471460845,0.381988425558278,0,0,0,0.901029173531752,0.285826432630578,0,0,0.5867062865676,0,0,0,0,0,0,0,0,0.142977993658148,0,0.823240336780769,0.325736184293735,0,0.791951872933429,0,0,0,0,0,0,0,0,0,0,0.61642896765115,0.179060963239896,3.25046917581229,0,0,0,0,0,1.54657762555539,0,0,0,0,0,0,0,0,0.207970861530807,1.07057393278297,0.315404830067869,0,0,0,0,0.664225598535437,0.184369168541703,0.347534457872331,0,0,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0.246381468041427,0,0.116210378459959,0.362578348774867,0,0,0.229628896329213,2.73136752010076,0,0,0.462092022626489,0,0,0.105551628892876,0,0,1.72732732881711,0,0,0,0,0,0,0.219259876645935,0.261435451024901,0.769350375349168,0,0,0,1.46511143709349,0.247528499761764,0,0,1.6068392984416,0,0.154048617114644,0.460511024178389,0.137836572484531,0.214840489736547,0.580066775656914,0.0852266274161009,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0.318203247925937,0,0,0.274537029736055,0.235624804691373,0,0,0,0,0,0,0.272999822815972,0.282810863907425,0,0,0,0,0,0,0,0,0.281695602532241,0.143411352204052,0.0982490410131212,0,0,0.211107635297664,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.640944426764839,0,0.735120647943095,0.557409525377156,0.28853842595289,0.782560276832555,1.75368900001705,1.99579371432817,0,0,0.324621940274555,0.842391534340376,0.684704037099577,1.09675927041116,0,0.677167111206413,1.4452926759333,3.02699560786571,0.425846237690326,0,0.307240764308458,0.447352215784832,0.500547425135725,0.19538809540204,0.278406173895242,0,0.270455678475983,0.33307196799782,0,0.37428108081644,0,0.121360521749513,1.00299045849731,1.42068073403207,0,0.296964680832639,0,0,0,0,0.659215496907038,0.844501632511974,0,0,1.0077309914171,0.409074730008619,0.369254416383208,0,0.0898683511473268,0.179021174675609,1.02314474045374,0,0,0,0,0,0,0.260427761085233,0,0,0.1137934482855,1.27126825146383,2.12748913591143,0.344743373241465,1.74962768029953,2.43074992906609,0,0,0,0,0,0,0.10893846351899,0,0,0.113942055847001,0,0.628303510868405,0.325942115766024,0,0,0,1.02193298195737,0.470940769185074,0.166211681900156,0.902382642468723,0.784250137270958,0.503464760927528,0.37950746544837,0,1.05499032264014,0.326465616318295,0,0.432777279484182,0,0,0,0,0.370691816839509,0.104421949505455,0,0,0,4.56136973039165,0.19566461893209,0.242780379534093,0,0,0,0,0,0.311064574191741,0,0,0,0,0,0.138674673013139,0.347119476670262,0.0979923974143777,0.261177619741208,0,0.343972064943233,1.54810130062536,1.0232504392066,1.14961639874493,0.0969890164884194,0,0,0.548167698587004,1.39100228192093,0,2.15106521008283,0,0,2.99714414373195,0.432271251462318,0.572682980829578,1.02956998717179,0,0,0,0.543616824294456,0.313808538937,0.713987523454252,0,0,0,0,0,1.05154941711726,0,0,0,0,0,0,0,0,0,0.945398187686684,1.15382201733633,1.07845670166696,0.0984274815147488,0.254019996197353,0,0,1.76828463311521,0.825236619583403,1.24632101408756,0,0,0,0,0,0,0,0,0.383830394638891,0,0,0.25426853765475,0,0,0.326587360109409,0,0.82092520749339,0.170388021785422,0.339936274560377,0,0,0,0,0.171086837884329,0,0,0,0,0,0.592834895693833,0.60896299190448,0,0,0,0,0,0,0,0,0,0,0,0,3.87376177821446,0.37494122388632,0.151649117541648,0.285465333544967,0,1.87333962322753,0.579684114443301,0.149254802886874,0.233713309847224,0,0,0,0,0,0,0.310874401165561,0.295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| |||
|short_description=p@chr17:38556243..38556260,- | |||
}} |
Revision as of 15:09, 20 January 2014
Short description: | p@chr17:38556243..38556260, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | No |
Description: | CAGE_peak_at_chr17:38556243..38556260, - |
Coexpression cluster: | C2405_small_Chondrocyte_gall_medulloblastoma_diffuse_mesenchymal_testicular |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 7.00e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 1.27e-07 | 2 |
alveolar duct | 1.27e-07 | 2 |
bronchiole | 1.27e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.29e-20 | 235 |
disease of cellular proliferation | 5.87e-20 | 239 |
carcinoma | 3.85e-12 | 106 |
cell type cancer | 3.17e-11 | 143 |
organ system cancer | 5.36e-09 | 137 |
mixed cell type cancer | 3.44e-08 | 2 |
carcinosarcoma | 3.44e-08 | 2 |
bronchus cancer | 3.86e-08 | 7 |
bronchogenic carcinoma | 3.86e-08 | 7 |
lung adenocarcinoma | 1.27e-07 | 2 |
hematologic cancer | 6.76e-07 | 51 |
immune system cancer | 6.76e-07 | 51 |