FFCP PHASE1:Hg19::chr17:42635607..42635631,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr17:42635607..42635631,+ | |||
|id=chr17:42635607..42635631,+ | |||
|ontology_enrichment_celltype=CL:0000057!3.48e-13!75;CL:0000055!1.47e-10!180;CL:0002620!1.31e-08!23 | |||
|ontology_enrichment_celltype_v019=CL:0002575;1.63e-24;2!CL:0000346;1.88e-16;3!CL:1000428;1.88e-16;3!CL:0000669;9.19e-13;4!CL:0002559;2.97e-10;5!CL:0002549;4.04e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002575,2.97e-24,2;CL:0000346,1.37e-16,3;CL:1000428,1.37e-16,3;CL:0000669,1.23e-12,4;CL:0002559,2.47e-10,5;CL:0002549,4.69e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004923!1.07e-09!57;UBERON:0003102!2.57e-08!95 | |||
|ontology_enrichment_uberon_v019=UBERON:0000412;1.88e-16;3!UBERON:0001992;1.88e-16;3!UBERON:0002073;2.97e-10;5!UBERON:0003688;1.08e-08;6!UBERON:0002358;1.08e-08;6!UBERON:0003684;1.08e-08;6!UBERON:0001178;1.08e-08;6!UBERON:0005629;4.04e-07;2!UBERON:0005358;4.04e-07;2!UBERON:0001886;4.04e-07;2!UBERON:0004086;4.04e-07;2!UBERON:0005282;4.04e-07;2!UBERON:0005281;4.04e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000412,1.37e-16,3;UBERON:0001992,1.37e-16,3;UBERON:0002073,2.47e-10,5;UBERON:0005086,2.47e-10,5;UBERON:0003688,8.24e-09,6;UBERON:0002358,8.24e-09,6;UBERON:0003684,8.24e-09,6;UBERON:0001178,8.24e-09,6;UBERON:0004923,5.14e-08,66;UBERON:0005629,4.69e-07,2;UBERON:0005358,4.69e-07,2;UBERON:0001886,4.69e-07,2;UBERON:0004086,4.69e-07,2;UBERON:0005282,4.69e-07,2;UBERON:0005281,4.69e-07,2 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.281908808191942,0,1.78784437770915,0.872338524100369,0,0,0,0,0,0,0,0.618831764800233,0.994192127183747,0,0.602694528023977,0,0,0,0,0,0,0,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.447830948479849,1.29557466407592,0.257575567634187,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443458794925128,0.087834785693126,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0.25326102332916,0.264818361626438,1.14734648299525,0.354668382198357,0,0,0,0,0,0.163461903113459,0.151357427644931,1.15235184896,0,0,0,0,0.117434498643765,0.161872944368132,0.140450806702248,0,0,0.206651562351531,1.18800285728205,0.741800787835671,0,0,0.168336113954066,0.125118519871964,0,0.438977620880838,0.919463387397059,0.150238058906597,0,0.358779271377724,1.2813443329114,0.211931901159562,0,0.206105058476878,0.257640540045629,0.37223371266318,0,0.292311015483596,0,0.184099797284599,0.80823028409406,0.355009592516614,0.302256294682921,0.339121184620975,0,0,0,0,0,0.116193942869518,0.207322110030741,0.252320850875628,0.36497735907583,0,1.28648187638577,1.38134921352481,0,0,0.236613600079688,0,0,0.110293972732394,0,0.237270619111097,0.134831308160164,0.196221465125346,0,0,0,0,0,0,0,0,0,0.122988438543114,0.343135620597051,0,0,0,0,0.651616610620649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25248486685276,0,0,0,0,0.102827492703324,0,0,0,0,0.07333828582095,0,0,0,0.797814349754612,1.04007436911366,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,2.29723871668228,0,0.144781306667579,0,0,0,0,0,0,0,0,0.773288812777695,0.167516265334349,0,0,0,0,0,0,0,0.207970861530807,0.713715955188647,0.315404830067869,0.35142424497814,0,4.5481500811197,4.1389228517002,0,0,0.260650843404249,2.54541504701563,1.02943027143257,0,0,0,0.303127571446259,0,0,0.248107807818777,0,0.280660094433074,0.384417447767103,0,1.28683136914886,0,0.154209693802656,0,0,0,0.232420756919918,0.483437798366489,0,0,0.229628896329213,0.364182336013434,0.393373244878272,0.451199612907412,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0.656029291399411,0.976135183992909,0,0,0,0,0,0,0.676695028044854,0,0,0,0,0.145016693914229,0.255679882248303,0.979352392114111,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0.949138274156178,0.190630193923825,0.255897791311334,0.42793898803392,0,0,0.179872457583315,0,0,0,0,0,0.48763373908959,0,0,0.682499557039929,0.424216295861138,0,0.551365343546124,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320472213382419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201799707191048,0,0,0,0.223676107892416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211125408127993,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0.108647371922008,0,0.274792780205587,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313932918407225,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0.104602846312333,0.101998217636322,0,0,0.136905378891993,0,0,0.262887354279314,0,0.229160424011684,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0.962776056180637,0.415440338029185,0.2249738915515,0,0,0,0,0.0524545881349981,0.316801009558219,0,0,0,0,0,0,0,0,0,0,0.511164065356265,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0.285465333544967,0,0,0,0,0.233713309847224,0,0.189403005275089,0,0,0,0.453692771289717,0,0,0,0,0.155262956876259,0.414706207840855,0,0,0,0,0,0,0,0,0,0,0,0.336749488765919,0,0,0,0,0.226705925512272,0,0,3.40268798054826,0.308801447160972,0.657852148736121,0.176689145945881,0.192914038270915,0,0,0.345430341731199,0,0,0,0,0,0.327609848846413,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0.6124909547064,0,0,0,0,0.252071696221718,0,0.161475645631851,0,0.196295437002051,0.11796972334774,0,0.115525666150338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.237840181555137,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252332849670158,0.109265571963696,0.506794004045748,0.101988829741982,0,0,0,0.0757786982182394,0,0,0,0.213233981900981,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,1.70763753404345,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p@chr17:42635607..42635631,+ | |||
}} |
Revision as of 15:41, 20 January 2014
Short description: | p@chr17:42635607..42635631, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:42635607..42635631, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system pericyte | 2.97e-24 | 2 |
hair follicle dermal papilla cell | 1.37e-16 | 3 |
stem cell of epidermis | 1.37e-16 | 3 |
pericyte cell | 1.23e-12 | 4 |
hair follicle cell | 2.47e-10 | 5 |
fibroblast of choroid plexus | 4.69e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
dermal papilla | 1.37e-16 | 3 |
papillary layer of dermis | 1.37e-16 | 3 |
hair follicle | 2.47e-10 | 5 |
hair follicle placode | 2.47e-10 | 5 |
omentum | 8.24e-09 | 6 |
peritoneum | 8.24e-09 | 6 |
abdominal cavity | 8.24e-09 | 6 |
visceral peritoneum | 8.24e-09 | 6 |
organ component layer | 5.14e-08 | 66 |
vascular plexus | 4.69e-07 | 2 |
ventricle of nervous system | 4.69e-07 | 2 |
choroid plexus | 4.69e-07 | 2 |
brain ventricle | 4.69e-07 | 2 |
ventricular system of brain | 4.69e-07 | 2 |
ventricular system of central nervous system | 4.69e-07 | 2 |