FFCP PHASE1:Hg19::chr17:71228276..71228297,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84923 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25918 | |||
|TSSclassifier=strong | |||
|UniProt=Q969W3 | |||
|association_with_transcript=0bp_to_BC025238,U92989_5end | |||
|description=CAGE_peak_2_at_FAM104A_5end | |||
|id=chr17:71228276..71228297,- | |||
|ontology_enrichment_celltype=CL:0000066!1.53e-20!254;CL:0002321!1.06e-19!248;CL:0000220!6.84e-19!246;CL:0000221!5.29e-17!71;CL:0000133!3.38e-16!59;CL:0000333!6.94e-12!41;CL:0002077!6.69e-10!33;CL:0000075!9.88e-10!27;CL:0000710!6.36e-09!20;CL:0002319!2.01e-08!25;CL:0000147!4.69e-08!14;CL:0000148!1.02e-07!10;CL:0000541!1.02e-07!10;CL:0000548!5.29e-07!679;CL:0000004!5.29e-07!679;CL:0000255!5.29e-07!679;CL:0000012!8.03e-07!682 | |||
|ontology_enrichment_celltype_v019=CL:0000075;1.21e-11;27!CL:0000710;4.01e-10;20!CL:0000147;6.09e-10;14!CL:0002319;6.95e-10;25!CL:0000148;1.21e-09;10!CL:0002077;9.82e-09;34!CL:0000039;5.95e-07;7!CL:0000586;5.95e-07;7!CL:0000095;6.38e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000133,1.87e-19,59;CL:0000221,1.15e-18,72;CL:0000066,3.17e-17,253;CL:0002321,1.20e-15,250;CL:0000333,1.21e-14,41;CL:0000075,7.68e-12,27;CL:0000710,3.24e-10,20;CL:0000147,3.83e-10,14;CL:0002319,8.93e-10,25;CL:0000148,1.06e-09,10;CL:0000541,1.06e-09,10;CL:0002077,1.18e-09,34;CL:0000039,4.80e-07,7;CL:0000586,4.80e-07,7;CL:0000095,8.56e-07,17;CL:0000123,8.56e-07,17 | |||
|ontology_enrichment_development_v019=CL:0000133;9.09e-11;59!CL:0000221;8.64e-09;72 | |||
|ontology_enrichment_disease=DOID:0050687!4.72e-12!143;DOID:14566!1.13e-10!239;DOID:162!1.89e-10!235;DOID:305!7.04e-09!106;DOID:3095!1.44e-07!22;DOID:2994!1.44e-07!22 | |||
|ontology_enrichment_disease_v019=DOID:3095;1.55e-09;22!DOID:2994;1.55e-09;22 | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,4.18e-10,143;DOID:3095,1.99e-09,22;DOID:2994,1.99e-09,22;DOID:162,3.37e-08,235;DOID:14566,3.69e-08,239;DOID:305,4.63e-07,106 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000019;9.35e-07;19!UBERON:0000047;9.35e-07;19!UBERON:0004088;9.35e-07;19!UBERON:0010230;9.35e-07;19 | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0.363356758541113,0.428201047781966,0.704772020479856,1.0007329835313,1.34088328328186,0.872338524100369,0,0.631719873426831,0.522371256399677,0.491467873003018,0,1.96597234917155,1.05506791291381,0.74259811776028,1.65698687863958,0.672325146451775,0,1.46062018077475,0,2.21617904538218,1.22400414746552,1.56727360739044,2.57612388417951,2.32686522623903,3.01302335027527,1.06978768047132,0.656804715599566,0.787107813136792,0.393364276848904,0,0,0.919421224478927,1.50602959389125,0.369754010166788,4.6480320348181,1.56386155736164,0.293600439334847,0,0.401088894940283,0.434021741431704,0,0,0,0,0,0.242584061187816,0.697287110717054,0,0,0.28769239232215,0.256160706529101,0.236482229888585,0,0.645484683583826,0,0.376484679085209,0,0,0.612167784741805,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.853460445133014,0,0,0,0,0,0,0,0,0.560508562981536,0.790152254325231,0.196709770113833,0,0.205601498999509,0,0,0,1.94826728407911,0.111410456885174,0.294605907474837,0,0,0.25618263945135,0.390178042679635,0,0,0,0.14828656316206,0,0,0.339928028092699,0.383220493601921,0,0,0,0,1.90090408889675,0.150575119077773,0,0,0.473554504088034,0,0,0.802320587350522,0.289648807765598,0,1.34140171940727,0.639312809217652,0,0,0.724232594804119,1.5905718941022,1.45990461090791,1.79616152611729,1.55210578223795,1.58102614247627,1.89919659471683,3.27865759463288,2.22470665670658,0.324547393654683,0,0.132957960518865,0.476981248610684,0,0,1.59009925893364,2.58070378531837,1.04142150482278,2.82653970962005,1.25849830862972,0.825354125820202,0.417989933073621,0.258416759169329,1.06729878806013,0,0.805658634218294,0.760272105718513,2.19655851793353,1.10298924103761,0.81014194788176,0.982297011124877,0.898117490504679,1.0135033243499,0,0,1.64881569537367,1.31780417436063,3.87780264148325,2.61656431285521,0.496971951695318,1.39293562831038,0.397227542439656,0,1.06400514659507,1.12135520028461,0,1.2333377420858,0.622422070799533,0.404132016209064,0.326923806226917,1.96764655938411,4.03323147135999,4.45210720484214,0,1.1409436430889,0.597794722207204,0.352303495931295,0.809364721840658,0.561803226808994,0.816616685019573,3.56219520204127,1.96318984233954,2.37600571456411,1.48360157567134,0,0,3.70339450698946,2.37725187756732,1.10825646193673,0.438977620880838,0.612975591598039,0.600952235626387,1.58805056424029,0.358779271377724,0.85422955527427,1.27159140695737,0.300091096084402,0.515262646192195,0,0.558350568994769,0.337552664482532,0.584622030967192,0.252433774244115,1.01254888506529,0.969876340912871,0.710019185033229,1.10827308050404,2.54340888465731,0.773043412653187,1.90922284413584,1.43402297694502,3.29329006549908,4.24095258628753,4.53156377191122,5.18305275076852,2.77552935963191,2.55484151353081,0,1.28648187638577,4.14404764057442,0.928735856063958,0.721879481669586,0.709840800239063,1.01150814046861,0.482022059766964,0.882351781859152,0.871517776369625,0.949082476444386,1.48314438976181,0.784885860501384,0,1.4763109092493,0,1.2347220339942,1.47008711385542,0,1.96565443335525,0.590789906681404,0,0.614942192715568,1.3725424823882,0.658501712451753,0,2.21163739305588,1.85176890317059,8.79682424337877,5.19967392639789,0,1.85488647960123,1.17408694235822,1.58803092537181,0.462985512576611,1.33177906564219,0,0.858486162094873,0,0,0,1.87467667973554,0.839910640994298,1.13420077793909,0.895585227028483,3.48760726216754,2.68367875415648,1.97065295158377,0.616339038092582,0,0.288239906833923,0.50496973370552,7.68324520935245,3.81988425558278,4.68869788840188,8.55362230113526,5.14137463516618,9.91132090884928,8.57479297891735,2.01835951821649,0.87192013766656,2.0534720029866,0.775630294546667,0,0.845302752556,1.59562869950922,1.04007436911366,1.80045161983499,0,1.0656887160644,0.57191197463259,1.08524321078289,0.823240336780769,0.325736184293735,0.355391948742546,0.791951872933429,0.602878754119172,0,0.699810938274399,0,0,0,0.718874566474748,1.14861935834114,0,0.434343920002738,0.205476322550383,0.716243852959582,1.56919201590938,0,0.215627574859517,0.256686072559497,3.55732473911449,2.60279707715243,1.54657762555539,1.00509759200609,2.55175500661265,0,0,0.414415513436035,1.47229790062968,2.00068208423871,1.35632511849868,2.07970861530807,2.67643483195743,2.05013139544115,2.22568688486155,0.902838299183157,0,0,0.664225598535437,1.47495334833363,1.82455590382974,1.76221041716467,1.02943027143257,0,0,0,1.21251028578504,1.66435439510497,1.20956117331872,0.992431231275107,0.306923946576125,0.561320188866147,1.28139149255701,0,0.482561763430822,0,0.462629081407967,0.710246901252508,0.657017248110473,1.03850885836724,0.813472649219715,1.69203229428271,0.802025881213139,0.552485933615378,0.68888668898764,1.0925470080403,1.57349297951309,0.902399225814824,1.15523005656622,2.35304930753057,0,1.47772280450026,0,1.19065593693561,1.51141141271498,0,1.89662506280697,0,2.29388645740534,1.66215201785745,4.02974558499921,1.75407901316748,2.0914836081992,1.53870075069834,1.31205858279882,1.62689197332152,1.33953315142039,0.640986253728404,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| |||
|short_description=p2@FAM104A | |||
}} |
Revision as of 17:08, 20 January 2014
Short description: | p2@FAM104A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_FAM104A_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_BC025238, U92989_5end |
EntrezGene: | FAM104A |
HGNC: | 25918 |
UniProt: | Q969W3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neurectodermal cell | 1.87e-19 | 59 |
ectodermal cell | 1.15e-18 | 72 |
epithelial cell | 3.17e-17 | 253 |
embryonic cell | 1.20e-15 | 250 |
migratory neural crest cell | 1.21e-14 | 41 |
columnar/cuboidal epithelial cell | 7.68e-12 | 27 |
neurecto-epithelial cell | 3.24e-10 | 20 |
pigment cell | 3.83e-10 | 14 |
neural cell | 8.93e-10 | 25 |
melanocyte | 1.06e-09 | 10 |
melanoblast | 1.06e-09 | 10 |
ecto-epithelial cell | 1.18e-09 | 34 |
germ line cell | 4.80e-07 | 7 |
germ cell | 4.80e-07 | 7 |
neuron associated cell | 8.56e-07 | 17 |
neuron associated cell (sensu Vertebrata) | 8.56e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 4.18e-10 | 143 |
germ cell and embryonal cancer | 1.99e-09 | 22 |
germ cell cancer | 1.99e-09 | 22 |
cancer | 3.37e-08 | 235 |
disease of cellular proliferation | 3.69e-08 | 239 |
carcinoma | 4.63e-07 | 106 |