FFCP PHASE1:Hg19::chr18:20122740..20122747,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C2454 | |||
|description=CAGE_peak_at_chr18:20122740..20122747,+ | |||
|id=chr18:20122740..20122747,+ | |||
|ontology_enrichment_celltype=CL:0002579!6.35e-25!3;CL:0002334!2.20e-23!12;CL:0002617!2.56e-16!2;CL:0000136!5.50e-13!15;CL:0002615!1.03e-11!3;CL:0002580!2.51e-11!3;CL:0002616!2.60e-09!1;CL:0000057!4.00e-07!75 | |||
|ontology_enrichment_celltype_v019=CL:0002579;5.20e-118;3!CL:0002615;3.75e-53;3!CL:0002334;2.22e-30;12!CL:0000136;3.43e-13;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0002579,3.48e-118,3;CL:0002615,4.89e-53,3;CL:0002334,2.01e-30,12;CL:0000136,1.50e-11,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3369!3.31e-09!1;DOID:4235!5.75e-09!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003688!1.68e-33!6;UBERON:0002358!1.68e-33!6;UBERON:0003684!1.68e-33!6;UBERON:0001178!1.68e-33!6;UBERON:0004457!1.38e-23!12;UBERON:0000042!1.38e-23!12;UBERON:0000310!1.45e-12!10;UBERON:0001443!1.94e-11!11;UBERON:0004458!4.02e-07!49 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;5.40e-163;6!UBERON:0002358;5.40e-163;6!UBERON:0003684;5.40e-163;6!UBERON:0001178;5.40e-163;6!UBERON:0004457;4.60e-109;9!UBERON:0000042;4.60e-109;9!UBERON:0002323;4.42e-16;45!UBERON:0004458;1.22e-14;48!UBERON:0002553;6.10e-12;52!UBERON:0004923;8.61e-11;55!UBERON:0002417;5.15e-10;58!UBERON:0000916;5.15e-10;58 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,5.41e-163,6;UBERON:0002358,5.41e-163,6;UBERON:0003684,5.41e-163,6;UBERON:0001178,5.41e-163,6;UBERON:0004457,4.43e-82,12;UBERON:0000042,4.43e-82,12;UBERON:0002323,4.33e-22,46;UBERON:0004458,8.73e-21,49;UBERON:0003886,6.22e-19,54;UBERON:0002417,4.10e-17,60;UBERON:0000916,4.10e-17,60;UBERON:0002553,7.61e-17,61;UBERON:0004923,1.27e-15,66;UBERON:0009569,1.80e-09,112 | |||
|phase1_expression=0.181678379270557,0.214100523890983,1.26858963686374,1.0007329835313,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0.529636723252875,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974370051611986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.992431231275107,0.153461973288062,0,4.48487022394953,1.02341449813341,1.44768529029247,0,0,0.532685175939381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318203247925937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.406896178315738,0,0,0 | |||
|short_description=p@chr18:20122740..20122747,+ | |||
}} |
Revision as of 18:44, 20 January 2014
Short description: | p@chr18:20122740..20122747, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:20122740..20122747, + |
Coexpression cluster: | C2454_Preadipocyte_Adipocyte_mesenchymal_Fibroblast_Ewing_Sertoli_Synoviocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
omentum preadipocyte | 3.48e-118 | 3 |
adipocyte of omentum tissue | 4.89e-53 | 3 |
preadipocyte | 2.01e-30 | 12 |
fat cell | 1.50e-11 | 15 |
Ontology term | p-value | n |
---|---|---|
omentum | 5.41e-163 | 6 |
peritoneum | 5.41e-163 | 6 |
abdominal cavity | 5.41e-163 | 6 |
visceral peritoneum | 5.41e-163 | 6 |
cavity lining | 4.43e-82 | 12 |
serous membrane | 4.43e-82 | 12 |
body cavity | 4.33e-22 | 46 |
body cavity or lining | 8.73e-21 | 49 |
body cavity precursor | 6.22e-19 | 54 |
abdominal segment of trunk | 4.10e-17 | 60 |
abdomen | 4.10e-17 | 60 |
anatomical cavity | 7.61e-17 | 61 |
organ component layer | 1.27e-15 | 66 |
subdivision of trunk | 1.80e-09 | 112 |