FFCP PHASE1:Hg19::chr18:47808120..47808171,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4152 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6916 | |||
|TSSclassifier=strong | |||
|UniProt=Q9UIS9,A8K654,B4DXJ5,B4DI41,B4DUR3 | |||
|association_with_transcript=0bp_to_ENST00000269468,ENST00000269471,ENST00000339998,ENST00000347968,ENST00000349085,ENST00000382948,ENST00000436910,NM_001204136,NM_001204137,NM_001204138,NM_001204139,NM_001204140,NM_001204141,NM_001204142,NM_001204143,NM_002384,NM_015844,NM_015845,NM_015846,NM_015847,uc002leg.2,uc002leh.3,uc002lei.3,uc002lej.3,uc002lek.3,uc002lel.3,uc002lem.3,uc002len.2,uc002leo.2,uc010dow.1,uc010xdj.1,uc010xdk.1_5end | |||
|description=CAGE_peak_2_at_MBD1_5end | |||
|id=chr18:47808120..47808171,- | |||
|ontology_enrichment_celltype=CL:0000542!4.76e-14!53;CL:0000051!4.76e-14!53;CL:0000838!1.83e-13!52;CL:0000037!9.91e-11!172;CL:0000566!9.91e-11!172;CL:0000988!1.32e-10!182;CL:0000945!7.51e-10!24;CL:0000826!7.51e-10!24;CL:0002032!1.24e-09!165;CL:0000837!1.24e-09!165;CL:0002087!5.58e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0000945;3.87e-10;24!CL:0000542;8.24e-08;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,8.38e-14,53;CL:0000051,8.38e-14,53;CL:0000838,3.31e-13,52;CL:0000037,2.04e-10,168;CL:0000945,3.57e-10,24;CL:0000826,3.57e-10,24;CL:0000988,4.35e-10,177;CL:0002032,2.65e-09,161;CL:0000837,2.65e-09,161 | |||
|ontology_enrichment_development_v019=CL:0000051;8.24e-08;53 | |||
|ontology_enrichment_disease=DOID:2531!3.81e-10!51;DOID:0060083!3.81e-10!51;DOID:1240!1.13e-08!39;DOID:8692!6.22e-07!31 | |||
|ontology_enrichment_disease_v019=DOID:1240;3.33e-08;39!DOID:8692;1.12e-07;31!DOID:2531;2.73e-07;51!DOID:0060083;2.73e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,3.01e-10,51;DOID:0060083,3.01e-10,51;DOID:1240,3.38e-09,39;DOID:8692,1.64e-07,31 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| |||
|short_description=p2@MBD1 | |||
}} |
Revision as of 19:21, 20 January 2014
Short description: | p2@MBD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MBD1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000269468, ENST00000269471, ENST00000339998, ENST00000347968, ENST00000349085, ENST00000382948, ENST00000436910, NM_001204136, NM_001204137, NM_001204138, NM_001204139, NM_001204140, NM_001204141, NM_001204142, NM_001204143, NM_002384, NM_015844, NM_015845, NM_015846, NM_015847, uc002leg.2, uc002leh.3, uc002lei.3, uc002lej.3, uc002lek.3, uc002lel.3, uc002lem.3, uc002len.2, uc002leo.2, uc010dow.1, uc010xdj.1, uc010xdk.1_5end |
EntrezGene: | MBD1 |
HGNC: | 6916 |
UniProt: | Q9UIS9A8K654B4DXJ5B4DI41B4DUR3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 8.38e-14 | 53 |
common lymphoid progenitor | 8.38e-14 | 53 |
lymphoid lineage restricted progenitor cell | 3.31e-13 | 52 |
hematopoietic stem cell | 2.04e-10 | 168 |
lymphocyte of B lineage | 3.57e-10 | 24 |
pro-B cell | 3.57e-10 | 24 |
hematopoietic cell | 4.35e-10 | 177 |
hematopoietic oligopotent progenitor cell | 2.65e-09 | 161 |
hematopoietic multipotent progenitor cell | 2.65e-09 | 161 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 3.01e-10 | 51 |
immune system cancer | 3.01e-10 | 51 |
leukemia | 3.38e-09 | 39 |
myeloid leukemia | 1.64e-07 | 31 |