FFCP PHASE1:Hg19::chr19:571720..571739,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr19:571720..571739,- | |||
|id=chr19:571720..571739,- | |||
|ontology_enrichment_celltype=CL:0000066!1.32e-09!254;CL:0002319!3.61e-08!25 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.06e-07,253 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!6.50e-26!235;DOID:14566!4.41e-25!239;DOID:0050686!5.46e-17!137;DOID:0050687!5.02e-16!143;DOID:305!7.47e-15!106;DOID:8692!1.55e-13!31;DOID:2531!2.33e-13!51;DOID:0060083!2.33e-13!51;DOID:1240!1.57e-12!39 | |||
|ontology_enrichment_disease_v019=DOID:8692;1.41e-18;31!DOID:1240;5.38e-12;39!DOID:2531;1.41e-08;51!DOID:0060083;1.41e-08;51 | |||
|ontology_enrichment_disease_v019_2=DOID:162,2.77e-26,235;DOID:14566,2.84e-25,239;DOID:8692,3.37e-19,31;DOID:1240,1.30e-15,39;DOID:0050687,1.46e-15,143;DOID:2531,1.94e-14,51;DOID:0060083,1.94e-14,51;DOID:305,7.38e-14,106;DOID:0050686,9.64e-13,137 | |||
|ontology_enrichment_uberon=UBERON:0001737!8.77e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.70e-13;9!UBERON:0001557;1.70e-13;9!UBERON:0007625;4.41e-09;11!UBERON:0000019;1.87e-08;19!UBERON:0000047;1.87e-08;19!UBERON:0004088;1.87e-08;19!UBERON:0010230;1.87e-08;19!UBERON:0000970;6.63e-08;20!UBERON:0002104;2.07e-07;21!UBERON:0001456;2.07e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,8.09e-14,9;UBERON:0007625,2.75e-09,11;UBERON:0000019,5.56e-08,20;UBERON:0000047,5.56e-08,20;UBERON:0010312,5.56e-08,20;UBERON:0004088,5.56e-08,20;UBERON:0010230,5.56e-08,20;UBERON:0003072,5.56e-08,20;UBERON:0004128,5.56e-08,20;UBERON:0003071,5.56e-08,20;UBERON:0000970,1.75e-07,21;UBERON:0002104,1.75e-07,21;UBERON:0001456,4.96e-07,22 | |||
|phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0,0.737201809504527,2.79120467188971,0,0.263766978228454,0.123766352960047,0,0,0,0,0,1.10808952269109,0.816002764977012,0.313454721478088,4.86601178122796,3.83248390204076,3.51519390865448,0.305653622991805,0.328402357799783,0.550975469195755,0,0,0,0,0.30120591877825,0,0.697204805222715,1.84820002233648,3.22960483268332,0,0,0,0.223915474239924,0.32389366601898,0.257575567634187,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0.605399502633369,0,0.316462387440884,0.211255286311942,0,0.209658645508376,0.112328631146495,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,2.10707267820062,0,0,0,0,0,0,0,0,0,0,0,0.384273959177026,0,0,0,0,0,0,1.04535523804977,0.226618685395132,0,0,0,0,0,0.950452044448374,0.150575119077773,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,1.79616152611729,3.1042115644759,2.19586964232815,0.130979075497713,0,0.741568885568859,0,0,0.398873881556595,0.238490624305342,0,1.85728750664782,0.198762407366705,0.860234595106124,0.347140501607594,0,0.419499436209906,0.275118041940067,0,0.516833518338658,0.35576626268671,0.66944122552934,0,0,0.24406205754817,0.735326160691737,0,0.982297011124877,0.673588117878509,0.563057402416611,0,0,0.549605231791222,0,0,0,0,0.12663051166458,0,0,0,0,0,0.24666754841716,0.311211035399766,0,0.326923806226917,0.302714855289863,0,0.234321431833797,0,0,0,0.587172493218824,0.323745888736263,0.561803226808994,0,0.859840221182376,0,0,0,0,0,0.168336113954066,0.500474079487857,0.277064115484183,0,0.30648779579902,0.150238058906597,0.226864366320042,0.358779271377724,0,0,0,0.309157587715317,0,0.18611685633159,0,0,0.252433774244115,0,0,0,0,0.169560592310488,0,0,0,0.121973706129595,0.530119073285941,0.580969714347592,1.14027160516907,0.756962552626885,0,0,0,0,0,0,2.48444280083672,1.18009283054671,1.68707720918437,2.75734931830985,2.17879444092406,1.42362371466658,2.42696354688296,2.74710051175484,1.92373578473195,0,0,0.8231480226628,0,0,0,0,4.41463099414651,0.860919069801795,0.171567810298526,0.109750285408626,0,0.201057944823262,0.555530670951178,0,1.03993478527958,1.44331342025273,3.59384255422738,0.352226082707465,0.577465791044295,0.462985512576611,0.380508304469197,0.790204397959275,0.858486162094873,0.492434012174795,0.468008530278475,0.148631162288728,0,0,0,0.0895585227028483,0,0,0,0,0,0.144119953416961,0,0.126995788584338,0,0,0,0,0.300343057843917,0,0.224262168690721,0,0.4400297149257,0,0,0,0,0,0.257207374262142,0,0.266422179016099,0.142977993658148,0.542621605391443,0.823240336780769,0,0,0,0,0,0,0,1.00451418286425,0,0,0,0,0.144781306667579,0,0,0.448340575974109,0,0,0.128343036279748,3.30323011489202,3.90419561572865,2.31986643833309,1.34013012267479,1.91381625495949,0,0,0.414415513436035,0.12269149171914,0,0,0,0,0,0,0,0,0,0.664225598535437,0,0,0.783204629850962,0.686286847621712,0,0.215714200818617,0,0,0,0.30239029332968,0,0.153461973288062,0,0,0,0,0,0.462629081407967,0,0.164254312027618,0,0,1.0877350463246,0.40101294060657,0.0920809889358963,0.34444334449382,0.182091168006717,0,0.451199612907412,0.385076685522074,6.27479815341484,4.38417673959782,0.422206515571503,0,1.02056223165909,0.647747748306418,1.54227252690289,2.70946437543853,0.501689773854853,0.764628819135115,1.66215201785745,2.0148727924996,1.31555925987561,2.87578996127391,1.79515087581472,4.92021968549559,0,0.103041011647722,0.54941678891006,0.990113999047056,0,0,0,0.096670718292122,0,0.15350367472613,0.137836572484531,0.107420244868274,0,0.170453254832202,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0.949138274156178,0,0.255897791311334,0.42793898803392,0,0,0.179872457583315,0.274537029736055,0.235624804691373,0.202182481573316,0,0.421258456238981,0.48763373908959,0.243713489631284,0,0,0.565621727814851,0,0,0,0,0,0,0,0.30982349809975,0.845086807596724,0.143411352204052,0.196498082026242,0,0,0,0.329294892959902,0,1.74967360122491,0.192444225451024,0,0,0,0,0,0,0,0.507447609232169,0,0,0,0,0,0,0,12.9257126064243,0,3.18552280775341,0.371606350251437,0,0.497992903438899,2.39139409093234,0.59873811429845,2.48956981172077,2.54008299268659,3.24621940274555,2.52717460302113,1.36940807419915,2.35019843659535,10.0253790836027,2.20079311142084,3.05117342697029,3.43059502224781,1.27753871307098,0,4.91585222893533,4.92087437363315,5.00547425135725,0.586164286206121,0.556812347790485,1.23087398947712,1.08182271390393,0.99921590399346,1.4098700508785,0.748562161632879,0.439524537815682,8.00979443546789,0,0.568272293612826,0,0,0,0,0,0,0.988823245360557,1.90012867315194,0,0.276283915531148,0,1.1249555075237,0.369254416383208,0,0.808815160325942,0,1.53471711068062,0,0,0,0,0.0927680981618513,0,0.520855522170466,2.0990399999087,0,0,1.27126825146383,3.30942754475111,1.03423011972439,0.291604613383254,0.347249989866585,0,0,0,0,0.295547618953547,0,1.41620002574687,0,0.0769502585037971,0,0,0.628303510868405,0,0,0.0915975934018623,0,0,0,1.82832850090172,2.70714792740617,1.5685002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| |||
|short_description=p@chr19:571720..571739,- | |||
}} |
Revision as of 20:05, 20 January 2014
Short description: | p@chr19:571720..571739, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:571720..571739, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.06e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
larynx | 8.09e-14 | 9 |
pigment epithelium of eye | 2.75e-09 | 11 |
camera-type eye | 5.56e-08 | 20 |
simple eye | 5.56e-08 | 20 |
immature eye | 5.56e-08 | 20 |
ocular region | 5.56e-08 | 20 |
eyeball of camera-type eye | 5.56e-08 | 20 |
optic cup | 5.56e-08 | 20 |
optic vesicle | 5.56e-08 | 20 |
eye primordium | 5.56e-08 | 20 |
eye | 1.75e-07 | 21 |
visual system | 1.75e-07 | 21 |
face | 4.96e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
cancer | 2.77e-26 | 235 |
disease of cellular proliferation | 2.84e-25 | 239 |
myeloid leukemia | 3.37e-19 | 31 |
leukemia | 1.30e-15 | 39 |
cell type cancer | 1.46e-15 | 143 |
hematologic cancer | 1.94e-14 | 51 |
immune system cancer | 1.94e-14 | 51 |
carcinoma | 7.38e-14 | 106 |
organ system cancer | 9.64e-13 | 137 |