FFCP PHASE1:Hg19::chr19:15590242..15590278,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=114770 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30013 | |||
|TSSclassifier=strong | |||
|UniProt=Q96PD5 | |||
|association_with_transcript=36bp_to_NM_052890,uc002nbf.3,uc002nbg.3_5end | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_1_at_PGLYRP2_5end | |||
|id=chr19:15590242..15590278,- | |||
|ontology_enrichment_celltype=CL:0000181!3.52e-23!12;CL:0000417!3.52e-23!12;CL:0000668!3.52e-23!12;CL:0000414!3.52e-23!12;CL:0000412!3.52e-23!12;CL:0000182!3.52e-23!12 | |||
|ontology_enrichment_celltype_v019=CL:0000182;2.51e-14;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.51e-14,12 | |||
|ontology_enrichment_development_v019=UBERON:0009117;4.50e-08;10!UBERON:0005564;4.50e-08;10!UBERON:0004161;1.62e-07;11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!3.67e-28!19;UBERON:0006925!3.67e-28!19;UBERON:0008836!3.67e-28!19;UBERON:0008835!2.99e-24!22;UBERON:0003894!2.99e-24!22;UBERON:0009854!3.58e-23!23;UBERON:0007499!2.83e-21!25;UBERON:0009497!2.83e-21!25;UBERON:0000015!2.83e-21!25;UBERON:0002423!2.83e-21!25;UBERON:0006235!2.83e-21!25;UBERON:0004161!2.83e-21!25;UBERON:0005057!1.95e-20!26;UBERON:0009856!1.95e-20!26;UBERON:0002365!4.79e-17!31;UBERON:0002330!4.79e-17!31;UBERON:0002368!4.97e-15!35;UBERON:0003929!2.68e-12!54;UBERON:0001301!2.75e-12!1;UBERON:0005172!4.31e-12!55;UBERON:0005173!4.31e-12!55;UBERON:0000949!1.50e-11!45;UBERON:0002417!8.16e-11!61;UBERON:0000916!8.16e-11!61;UBERON:0003135!1.27e-09!11;UBERON:0002530!1.19e-08!59;UBERON:0005911!8.67e-08!82;UBERON:0000466!1.70e-07!126 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;6.18e-24;19!UBERON:0006925;6.18e-24;19!UBERON:0002423;3.07e-18;25!UBERON:0002365;1.04e-14;31!UBERON:0002330;1.04e-14;31!UBERON:0002368;9.39e-13;33!UBERON:0000473;7.26e-10;8!UBERON:0000949;2.54e-09;43!UBERON:0003135;2.03e-07;11!UBERON:0005172;8.41e-07;52!UBERON:0005173;8.41e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,6.18e-24,19;UBERON:0006925,6.18e-24,19;UBERON:0008836,6.18e-24,19;UBERON:0008835,1.06e-20,22;UBERON:0003894,1.06e-20,22;UBERON:0009854,8.25e-20,23;UBERON:0007499,3.07e-18,25;UBERON:0009497,3.07e-18,25;UBERON:0000015,3.07e-18,25;UBERON:0002423,3.07e-18,25;UBERON:0006235,3.07e-18,25;UBERON:0004161,3.07e-18,25;UBERON:0009856,1.52e-17,26;UBERON:0002365,9.71e-15,31;UBERON:0002330,9.71e-15,31;UBERON:0002368,4.55e-13,35;UBERON:0000949,3.50e-10,45;UBERON:0000473,7.26e-10,8;UBERON:0003929,1.72e-08,54;UBERON:0005172,1.72e-08,54;UBERON:0005173,1.72e-08,54;UBERON:0002530,8.99e-08,59;UBERON:0002417,1.21e-07,60;UBERON:0000916,1.21e-07,60;UBERON:0003135,2.03e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0478326039817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,188.865001884528,93.3685855843745,60.2605704815032,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,104.071421764199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,101.298729635814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.84666373047609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307801034015188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.659326867049332,0.13480708770837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,91.8882505161577,39.7520666736664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.57647573942014,3.21556956187414,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@PGLYRP2 | |||
}} |
Revision as of 21:53, 20 January 2014
Short description: | p1@PGLYRP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PGLYRP2_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 36bp_to_NM_052890, uc002nbf.3, uc002nbg.3_5end |
EntrezGene: | PGLYRP2 |
HGNC: | 30013 |
UniProt: | Q96PD5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.51e-14 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 6.18e-24 | 19 |
digestive gland | 6.18e-24 | 19 |
liver bud | 6.18e-24 | 19 |
hepatic diverticulum | 1.06e-20 | 22 |
liver primordium | 1.06e-20 | 22 |
digestive tract diverticulum | 8.25e-20 | 23 |
epithelial sac | 3.07e-18 | 25 |
epithelium of foregut-midgut junction | 3.07e-18 | 25 |
anatomical boundary | 3.07e-18 | 25 |
hepatobiliary system | 3.07e-18 | 25 |
foregut-midgut junction | 3.07e-18 | 25 |
septum transversum | 3.07e-18 | 25 |
sac | 1.52e-17 | 26 |
exocrine gland | 9.71e-15 | 31 |
exocrine system | 9.71e-15 | 31 |
endocrine gland | 4.55e-13 | 35 |
endocrine system | 3.50e-10 | 45 |
testis | 7.26e-10 | 8 |
gut epithelium | 1.72e-08 | 54 |
abdomen element | 1.72e-08 | 54 |
abdominal segment element | 1.72e-08 | 54 |
gland | 8.99e-08 | 59 |
abdominal segment of trunk | 1.21e-07 | 60 |
abdomen | 1.21e-07 | 60 |
male reproductive organ | 2.03e-07 | 11 |