FFCP PHASE1:Hg19::chr19:17516909..17516922,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=93343 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25153 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000529490_5end | |||
|description=CAGE_peak_13_at_FAM125A_5end | |||
|id=chr19:17516909..17516922,+ | |||
|ontology_enrichment_celltype=CL:0000945!1.37e-09!24;CL:0000826!1.37e-09!24;CL:0002087!1.44e-09!119;CL:0002031!1.06e-08!124;CL:0000738!1.31e-08!140;CL:0000542!1.84e-08!53;CL:0000051!1.84e-08!53;CL:0000037!2.86e-08!172;CL:0000566!2.86e-08!172;CL:0000988!2.92e-08!182;CL:0000838!1.04e-07!52;CL:0002032!3.15e-07!165;CL:0000837!3.15e-07!165 | |||
|ontology_enrichment_celltype_v019=CL:1000415;1.64e-10;2!CL:0002097;2.60e-10;2!CL:0000077;3.88e-09;19!CL:0000174;2.71e-07;3!CL:0000784;2.71e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:1000415,1.72e-10,2;CL:0002097,3.27e-10,2;CL:0000077,4.41e-09,19;CL:0000784,2.19e-07,3;CL:0000174,3.16e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0060058!1.08e-12!10;DOID:162!1.19e-10!235;DOID:14566!4.18e-10!239;DOID:305!1.25e-08!106 | |||
|ontology_enrichment_disease_v019=DOID:0060058;2.57e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,2.53e-08,10;DOID:162,5.94e-07,235;DOID:14566,8.62e-07,239 | |||
|ontology_enrichment_uberon=UBERON:0001737!5.73e-16!9;UBERON:0001557!1.41e-12!19;UBERON:0004177!5.49e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;6.10e-09;9!UBERON:0001557;6.10e-09;9!UBERON:0002110;1.99e-07;3!UBERON:0002369;2.71e-07;3!UBERON:0001235;2.71e-07;3!UBERON:0006858;2.71e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,5.87e-09,9;UBERON:0002110,2.05e-07,3;UBERON:0006242,2.05e-07,3;UBERON:0002369,3.16e-07,3;UBERON:0001235,3.16e-07,3;UBERON:0006858,3.16e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.246301768349837,0.393553906568396,0,0,0,0,0,0,3.09868802321207,0.426507697462265,0.293600439334847,0,0,0,0,0,0,0,0.377875943688809,0,0,0,0,0.28769239232215,0,0.47296445977717,0,0,0,0,0.272906150057846,0,0.306083892370903,0,0,0.659702600373432,0,0.426224750532694,0.290209238628584,0,0,0.251248665256743,0,0.434377689410233,0,0.368277635987565,0.316462387440884,0,0,0.209658645508376,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0.128091319725675,0,0.328875809207352,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,1.71598473234038,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243947412259191,0.397589304964456,0.348581828608555,0.414644220061482,0,0.36497735907583,0,0,0,0,0,0.946454400318751,0.337169380156203,0.482022059766964,1.21323370005633,0.217879444092406,0.71181185733329,0.808987848960987,0.588664395376038,1.53898862778556,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224170287987055,0,0,0.256686072559497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.876901770507525,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371606350251437,0.144269212976445,0.142283686696828,0,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0.111443384277478,0.284136146806413,0,0,0,0,0,0.111308705022906,0.494411622680279,0,0,0.552567831062295,0,0,0.492339221844278,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0.0874599999961957,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30726156222788,0.139423744278603,0,0,0,0.718061155278177,0.108647371922008,0.957003479195758,0,0.533034776018635,0,0,0,0.225595660617181,0,0.167821586975843,0,0.158936578980379,0,0,0,0,0,0.0884575645033392,0,0,0.370691816839509,0.104421949505455,0,0,0,0.182454789215666,0.19566461893209,0,0,0,0,0.126373159256976,0.150323419414493,0,0,0,0,0,0.284609546029793,0,0,0,0,0,0,0.387025325156341,0.219267951258557,0.164230914106418,0,0,0,0,0,0,2.34661659281764,0,0,0.19980960958213,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0.858452096273142,0,0,0,0,0.393915911536118,0.412079291905832,0.404421263125109,0,0.423366660328922,0,0,0,0,0,0,0,0,0,0,0.157363764404994,0.105600336519406,0,0,0,0,0,0,0,0,0,0.246277562248017,0,0,0.146552233678082,0,0,0,0,0,0,0,0,0,0.197611631897944,2.9230223611415,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,1.07220795687463,1.04397716786085,0,0,1.46842022703881,0,0,0,0,0,0.168942440653073,0,0,0,0,0,0,0,0,0,0.211312123358627,0.19998739585493,0,0.688859918643263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0.0887023701626388,0.691403925334676,0,0,0,0,0,0,0,0,0,0,0.47775168788705,0,0,1.3948971044175,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0.187967835959707,0.0644578879735772,0.199882311849858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218531143927391,0,0.203977659483963,0,0.0918948995348449,0,0.0757786982182394,0,0,0,0.213233981900981,0,0.0645889098360061,0.186224142887574,0,0,0,0,0,0.0673520530145875,0.143444410785353,0,0,0,0,0,0,0,0,0,0,0.961705476909699 | |||
|short_description=p13@FAM125A | |||
}} |
Revision as of 22:02, 20 January 2014
Short description: | p13@FAM125A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_FAM125A_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000529490_5end |
EntrezGene: | FAM125A |
HGNC: | 25153 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of gall bladder | 1.72e-10 | 2 |
cortical cell of adrenal gland | 3.27e-10 | 2 |
mesothelial cell | 4.41e-09 | 19 |
plasmacytoid dendritic cell | 2.19e-07 | 3 |
steroid hormone secreting cell | 3.16e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
larynx | 5.87e-09 | 9 |
gallbladder | 2.05e-07 | 3 |
gall bladder primordium | 2.05e-07 | 3 |
adrenal gland | 3.16e-07 | 3 |
adrenal cortex | 3.16e-07 | 3 |
adrenal/interrenal gland | 3.16e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 2.53e-08 | 10 |
cancer | 5.94e-07 | 235 |
disease of cellular proliferation | 8.62e-07 | 239 |