FFCP PHASE1:Hg19::chr19:19216514..19216543,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr19:19216514..19216543,- | |||
|id=chr19:19216514..19216543,- | |||
|ontology_enrichment_celltype=CL:0000055!1.67e-07!180 | |||
|ontology_enrichment_celltype_v019=CL:0000039;5.37e-13;7!CL:0000586;5.37e-13;7!CL:0002322;3.96e-09;5!CL:0000148;8.55e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,5.88e-13,7;CL:0000586,5.88e-13,7;CL:0002322,5.96e-09,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3095;7.03e-12;22!DOID:2994;7.03e-12;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,4.92e-12,22;DOID:2994,4.92e-12,22 | |||
|ontology_enrichment_uberon=UBERON:0000481!3.14e-08!347;UBERON:0000475!7.71e-08!365;UBERON:0000468!5.31e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0000922;3.61e-09;49!UBERON:0002050;2.19e-08;5!UBERON:0005423;2.19e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006555,4.77e-07,16;UBERON:0004819,4.77e-07,16 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0.491467873003018,0,0,0.263766978228454,0.495065411840187,0,0,0,0,0,0.246242116153576,0.612002073732759,0.626909442956176,0.572471974262113,0.958120975510189,0.502170558379211,1.14620108621927,0.738905305049512,0.865818594450472,0,0,0,0.919421224478927,0.6024118375565,0,0,0,0,0,0,0,0.223915474239924,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0.144846518960824,0,0,1.22895262313288,0.443458794925128,0.351339142772504,0.851363990735132,0.728590576585084,0,0,0,0,0,0,0,0.198762407366705,0.860234595106124,0,0,0,0,0,0,0.35576626268671,0,0,0,0.24406205754817,0.367663080345869,0,0.17859945656816,0.44905874525234,0.675668882899933,1.53316637465883,0,0,0,0,0,0,0,0.264818361626438,0.573673241497627,0,0,0,0,0.311211035399766,0.538842688278752,0.326923806226917,0.302714855289863,0,0.468642863667593,0,0,0,0.822041490506354,0.323745888736263,0.140450806702248,0.61246251376468,0.61417158655884,2.16984140469107,2.37600571456411,0.247266929278557,0,0,0.505008341862199,0.750711119231785,2.49357703935765,0,0.30648779579902,0.600952235626387,0,0.179389635688862,0.213557388818567,0.423863802319124,0.600182192168805,0.721367704669072,0.772921620136887,0.18611685633159,0.168776332241266,0.292311015483596,0.504867548488229,0.460249493211497,0.484938170456436,0.355009592516614,0,0.67824236924195,0.386521706326594,0,0,1.09776335516636,0.795178609928912,3.02104251460748,1.24393266018445,2.01856680700503,1.09493207722749,0,0,0,0.928735856063958,0.721879481669586,0.118306800039844,0.337169380156203,0.482022059766964,0.441175890929576,0.217879444092406,0,0.134831308160164,0,0.769494313892781,0,0,1.6462960453256,0,0,0,0,0,1.10689594688802,0.171567810298526,0.219500570817251,0,0.100528972411631,0.277765335475589,0.325808305310325,0,1.44331342025273,0.811512834825538,0,0.433099343283221,0,0,0,0,0,0,0,0,0,0.283550194484773,0,0.290633938513962,0,0,0,0,0,0,0.253991577168676,1.14596527667483,2.34434894420094,0,0.616964956219941,0,0.571652865261156,0.336393253036082,0,0,0,3.57656445851882,0,0,0,0.514414748524284,0,0.532844358032199,0.142977993658148,0.542621605391443,0,0,0.355391948742546,0,0.301439377059586,0,0.199945982364114,0,0.502257091432126,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0.76228387266739,0,0,0.502548796003046,0.637938751653163,0,0,0,0.24538298343828,0.500170521059677,0.271265023699736,0.415941723061614,0.178428988797162,0.157702415033935,0.35142424497814,0.300946099727719,0,0,0,0.368738337083406,1.21637060255316,1.76221041716467,1.02943027143257,0,0,0,1.5156378572313,0,0.30239029332968,0.248107807818777,0.153461973288062,0.561320188866147,0.128139149255701,0,0,0,0,0.532685175939381,0.164254312027618,1.03850885836724,0,0.725156697549733,0,0.460404944679482,0.229628896329213,1.0925470080403,0.786746489756545,1.35359883872224,0.308061348417659,0.784349769176855,1.46139224653261,0.211103257785751,1.13733384070897,0.170093705276516,0,1.54227252690289,0.541892875087706,1.00337954770971,0,2.49322802678617,0.447749509444357,0,0,0.256450125116389,0.984043937099117,0.976135183992909,0.309123034943167,0,0,1.14853107599234,1.30012049207304,0,0.48335359146061,0,1.07452572308291,0.275673144969061,0.966782203814463,1.45016693914229,1.10794615640931,0.356128142586949,0,0.576570202095319,1.27612712494584,0.4046311234222,0.929691098594572,0.62962469366128,1.3940745403212,0.924100740528266,0.532306030317022,0,0,0.143124886741991,0.744316738719335,0,0.190630193923825,0.511795582622668,0.42793898803392,0.318203247925937,1.56989728039846,0.539617372749944,0.274537029736055,0.589062011728432,0.202182481573316,0,0.421258456238981,0.48763373908959,0.243713489631284,0,0.545999645631943,0.565621727814851,2.26016233240486,0.551365343546124,0,0,0.578775534266688,0,0,0.30982349809975,0.563391205064483,0.143411352204052,0.196498082026242,0,0,0,0.329294892959902,2.27683904259429,0.349934720244983,0.192444225451024,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0.223676107892416,0.166849141711909,0,0,0,0,0,0,0,0,1.57768678274367,0,0,0.23874448473769,0.296964680832639,0.307160702099232,0,0.281338832821026,0.222617410045812,0,0,0,0,1.0077309914171,0,0,0,0,0,0.511572370226872,0.295930216910801,0,0,0,0,0,0,0,0.724999575434793,0,0,0,1.03423011972439,0,0.173624994933292,0,0.241192877250816,0,0,0,0,0,0.278847488557207,1.76985594558733,0,0,1.52587995496613,1.52106320690811,0,0.0915975934018623,1.06606955203727,0,0,0,1.1279783030859,1.56850027454192,2.01385904371011,0.189753732724185,0.158936578980379,0,0,0,0,0,0.707660516026713,0.611030144933625,0,0,0,0.269604531922708,0,0,0,0,0,0.394584402849391,0,1.22429104652196,0.568679216656392,0.450970258243478,0.518440956986236,0,0,0,0,0.853828638089378,0,0,0,0,1.22308667769421,0,0.387025325156341,0.292357268344742,0.0821154570532092,0.775912131907355,3.17722056089401,0,0,0,0.0633107959558787,0.977756913674015,0,0.640358984218058,0,0,1.4889757501569,0.343189995723929,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0,0.229160424011684,0,0.399358000997982,0,0.223171457441873,0.201550417460179,0,0,0.393915911536118,0.0824158583811665,0.13480708770837,0,0,0,0.136203406111576,0.964518890790115,0.687697182986169,0.83088067605837,0,0,0.0607495566580247,0,0.315222829196793,1.78345599658994,0.105600336519406,0,0,0,0,0,1.08599920350743,0,0.326587360109409,0,0.492555124496034,0,0,0,1.32506888912221,0,0.39669780522807,0.171086837884329,0,0.106787412567695,0.314408610199332,0,0,0,0,0,0,0,0,0,0.628216385000937,0,0,0,0.573409195690071,0.443716206147409,0.310482014706917,0.138348634936231,0,0,0.285465333544967,0.235265819698172,2.34167452903441,1.1593682288866,0,0,0.554805861502613,0.189403005275089,0,0,0.457680136793847,0,0,0,0,0.899606224327209,0,0,0.265841714557995,0.521745061811734,0.150257608997218,0,0,0,0.214821114084977,0,0.398095888698616,0,0.343395705182793,0.336749488765919,0,0.192619830407303,0,0.260994291965212,0.680117776536817,0.231522474323834,0.734210113519403,0,0.617602894321944,0,1.41351316756705,0,0.168942440653073,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0.629063767423586,0,1.18812770967818,0,1.85903646388503,1.67593475391973,0,0,0,0,0.3062454773532,0.256916900385838,0,0,0,1.26035848110859,0,0,0,0,0,0,0,0,0,0.198916222116275,1.0529445968896,0,0,0.785720083444267,0,0,0.202612753855184,0,0,0,0,0,0,1.23109871051734,0,0.535701835878287,0,0.606965604236632,0.91064876540519,0.620916591138472,0,0,0.0679697329768317,0,0,0.333694205676207,0.470958557103084,0.314231179832004,0.280272163313789,0,0.215927591218621,0,1.00067161847319,0,0.348724276104376,0.173858272302579,0.801711364730253,0.207216164163037,0.17071847709395,0.691259661814092,0.430227358820278,0.118332000730565,0,0.846774100381858,0.68732060563215,0,0,0.223710863595585,0.294450700845729,0,0,0,0,0.485710993059139,1.16969731731053,3.58111395290463,0.713520544665411,0.11294608203896,0.109940516745429,0.754814217833368,0.617393264863557,0.874238242015829,0,0.490296643507811,0,0,0,0,0,0.187967835959707,0.193373663920732,0.299823467774787,0.178553938605658,0,0,0,0.458729283404541,0.143339583151451,0.315543124386369,0,2.61810414204226,0,0,0.462175628631418,0,0.883164973845552,1.09265571963696,0.126698501011437,1.01988829741982,1.06886962106224,2.75684698604535,1.25353769646188,0.454672189309436,0.267964130156178,0,0.103432995861895,0.852935927603924,0.476128862927481,0,0.124149428591716,0.672791175483681,2.92776928079559,1.0105859447911,0.217716747896961,0,0.606168477131288,0.286888821570705,0.665320713092027,0,0,0,0,0,1.95586310692586,1.22068853494722,1.33151354837103,0.402547587182052,0 | |||
|short_description=p@chr19:19216514..19216543,- | |||
}} |
Revision as of 22:19, 20 January 2014
Short description: | p@chr19:19216514..19216543, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:19216514..19216543, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 5.88e-13 | 7 |
germ cell | 5.88e-13 | 7 |
embryonic stem cell | 5.96e-09 | 5 |
Ontology term | p-value | n |
---|---|---|
excretory tube | 4.77e-07 | 16 |
kidney epithelium | 4.77e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 4.92e-12 | 22 |
germ cell cancer | 4.92e-12 | 22 |