FFCP PHASE1:Hg19::chr19:51517928..51517936,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=-318bp_to_AK026045_5end | |||
|description=CAGE_peak_2_at_AK026045_5end | |||
|id=chr19:51517928..51517936,- | |||
|ontology_enrichment_celltype=CL:0002076!1.42e-13!43;CL:0002251!1.06e-12!21;CL:0000066!3.00e-12!254;CL:0000223!4.72e-09!59;CL:0000076!7.92e-09!62;CL:1000415!2.61e-08!2 | |||
|ontology_enrichment_celltype_v019=CL:0002097;5.96e-34;2!CL:0002231;2.62e-23;3!CL:0000174;3.66e-23;3!CL:0000150;1.16e-08;9!CL:0000163;1.16e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002097,7.05e-34,2;CL:0002231,2.62e-23,3;CL:0000174,4.09e-23,3;CL:0000150,1.21e-08,9;CL:0000163,1.21e-08,9 | |||
|ontology_enrichment_development_v019=UBERON:0004874;3.34e-66;1 | |||
|ontology_enrichment_disease=DOID:1749!2.68e-09!14;DOID:3493!3.38e-08!2;DOID:305!3.78e-08!106 | |||
|ontology_enrichment_disease_v019=DOID:170;2.59e-12;6 | |||
|ontology_enrichment_disease_v019_2=DOID:170,2.74e-12,6 | |||
|ontology_enrichment_uberon=UBERON:0002294!3.25e-13!7;UBERON:0001173!3.25e-13!7;UBERON:0004912!3.25e-13!7;UBERON:0000166!1.19e-12!21;UBERON:0003729!4.75e-12!5;UBERON:0002110!7.10e-12!3;UBERON:0006242!7.10e-12!3;UBERON:0001723!9.92e-12!3;UBERON:0001033!9.92e-12!3;UBERON:0010056!9.92e-12!3;UBERON:0000165!3.31e-11!28;UBERON:0000930!3.31e-11!28;UBERON:0000344!1.56e-10!12;UBERON:0003343!5.60e-09!4;UBERON:0004785!5.60e-09!4;UBERON:0000161!9.91e-09!35;UBERON:0004119!2.46e-08!169;UBERON:0000925!2.46e-08!169;UBERON:0006595!2.46e-08!169;UBERON:0001004!5.19e-08!72;UBERON:0001007!7.94e-08!155;UBERON:0001555!7.94e-08!155;UBERON:0007026!7.94e-08!155;UBERON:0001444!4.64e-07!48 | |||
|ontology_enrichment_uberon_v019=UBERON:0000989;3.34e-66;1!UBERON:0008811;3.34e-66;1!UBERON:0002369;3.66e-23;3!UBERON:0001235;3.66e-23;3!UBERON:0006858;3.66e-23;3!UBERON:0003101;3.89e-13;22!UBERON:0000079;3.89e-13;22!UBERON:0002530;9.78e-08;57!UBERON:0002367;2.32e-07;11!UBERON:0010147;2.32e-07;11!UBERON:0003135;2.55e-07;11!UBERON:0003937;7.48e-07;12!UBERON:0005399;7.48e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000989,2.39e-66,1;UBERON:0008811,2.39e-66,1;UBERON:0006258,2.39e-66,1;UBERON:0005876,2.39e-66,1;UBERON:0004874,2.39e-66,1;UBERON:0002369,4.09e-23,3;UBERON:0001235,4.09e-23,3;UBERON:0006858,4.09e-23,3;UBERON:0003064,3.57e-22,28;UBERON:0003101,3.77e-13,22;UBERON:0000079,3.77e-13,22;UBERON:0002367,2.32e-07,11;UBERON:0010147,2.32e-07,11;UBERON:0009846,2.32e-07,11;UBERON:0003353,2.32e-07,11;UBERON:0004902,2.32e-07,11;UBERON:0003820,2.32e-07,11;UBERON:0009847,2.32e-07,11;UBERON:0003135,2.47e-07,11;UBERON:0004876,2.47e-07,11;UBERON:0003937,7.48e-07,12;UBERON:0005399,7.48e-07,12 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0,0.286804595389004,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439001141634502,0,0.301586917234893,0.185176890317059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.20994373446151,0,0,0,0.451199612907412,0,0,0,0.211103257785751,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0.192190067365106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0.568967241427498,0,0,0,0,0,0,0,0,0,0,0,0,0.697118721393016,0.0769502585037971,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0.391969589657511,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0.586654148204409,0.0801588202515337,0.426905989478705,0.799238438328521,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670869375198532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0.828478110694391,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07220795687463,0,0,0,0,0,0.617602894321944,0,0,0.38582807654183,0.168942440653073,0,0,0,0,0,0,0,0,0,0.422624246717254,0,0,0,0,0,0.419638523158333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0.733714394086716,0.231051332300676,0,0,0,0,0,0,0,0,0.887136517302272,0,0,0,0,0,0,1.48863353516788,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0,0,0,0.913158720509496,0,0,0,0,0,0,0,0.207216164163037,0,0,0,0,0,0,0.22910686854405,0,0,0,0.098150233615243,0.365753774946808,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217716747896961,0.342233301085281,0.134704106029175,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@AK026045 | |||
}} |
Revision as of 00:45, 21 January 2014
Short description: | p2@AK026045 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_AK026045_5end |
Coexpression cluster: | NA |
Association with transcript: | -318bp_to_AK026045_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cortical cell of adrenal gland | 7.05e-34 | 2 |
epithelial cell of prostate | 2.62e-23 | 3 |
steroid hormone secreting cell | 4.09e-23 | 3 |
glandular epithelial cell | 1.21e-08 | 9 |
endocrine cell | 1.21e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
penis | 2.39e-66 | 1 |
intromittent organ | 2.39e-66 | 1 |
lateral plate mesenchyme | 2.39e-66 | 1 |
undifferentiated genital tubercle | 2.39e-66 | 1 |
somatopleure | 2.39e-66 | 1 |
adrenal gland | 4.09e-23 | 3 |
adrenal cortex | 4.09e-23 | 3 |
adrenal/interrenal gland | 4.09e-23 | 3 |
intermediate mesoderm | 3.57e-22 | 28 |
male organism | 3.77e-13 | 22 |
male reproductive system | 3.77e-13 | 22 |
prostate gland | 2.32e-07 | 11 |
male accessory sex gland | 2.32e-07 | 11 |
embryonic cloacal epithelium | 2.32e-07 | 11 |
epithelium of hindgut | 2.32e-07 | 11 |
urogenital sinus epithelium | 2.32e-07 | 11 |
prostate bud | 2.32e-07 | 11 |
prostate field | 2.32e-07 | 11 |
male reproductive organ | 2.47e-07 | 11 |
urogenital ridge | 2.47e-07 | 11 |
sex gland | 7.48e-07 | 12 |
male reproductive gland | 7.48e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
endocrine gland cancer | 2.74e-12 | 6 |