FFCP PHASE1:Hg19::chr2:64054949..64054963,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51057 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28027 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=13bp_to_ENST00000467687,ENST00000490935_5end | |||
|coexpression_cluster_id=C29 | |||
|description=CAGE_peak_3_at_WDPCP_5end | |||
|id=chr2:64054949..64054963,- | |||
|ontology_enrichment_celltype=CL:0000136!1.13e-10!15;CL:0002615!4.11e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002253;1.05e-12;2!CL:0000136;4.02e-11;13!CL:0002166;2.60e-08;3!CL:0002563;9.26e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002253,1.05e-12,2;CL:0000136,1.47e-09,15;CL:0002166,2.42e-08,3;CL:0002563,9.26e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0000358;3.78e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;6.14e-12;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,6.14e-12,2 | |||
|ontology_enrichment_uberon=UBERON:0003688!1.54e-08!6;UBERON:0002358!1.54e-08!6;UBERON:0003684!1.54e-08!6;UBERON:0001178!1.54e-08!6;UBERON:0004923!7.20e-08!57;UBERON:0001723!7.01e-07!3;UBERON:0001033!7.01e-07!3;UBERON:0010056!7.01e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0000341;1.77e-12;2!UBERON:0003978;1.90e-08;3!UBERON:0000946;1.90e-08;3!UBERON:0001723;3.43e-08;3!UBERON:0001033;3.43e-08;3!UBERON:0007100;2.31e-07;25!UBERON:0002426;2.82e-07;1!UBERON:0003831;2.82e-07;1!UBERON:0003898;2.82e-07;1!UBERON:0004830;2.82e-07;1!UBERON:0003830;2.82e-07;1!UBERON:0005175;2.82e-07;1!UBERON:0001774;2.82e-07;1!UBERON:0001103;2.82e-07;1!UBERON:0002146;2.99e-07;1!UBERON:0005623;2.99e-07;1!UBERON:0001052;9.26e-07;4!UBERON:0001242;9.26e-07;4!UBERON:0001262;9.26e-07;4!UBERON:0004786;9.26e-07;4!UBERON:0004808;9.26e-07;4!UBERON:0001277;9.26e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000341,1.77e-12,2;UBERON:0003978,1.54e-08,3;UBERON:0009751,1.54e-08,3;UBERON:0000946,1.54e-08,3;UBERON:0002523,1.54e-08,3;UBERON:0005983,1.54e-08,3;UBERON:0002165,1.54e-08,3;UBERON:0002062,1.54e-08,3;UBERON:0007280,1.54e-08,3;UBERON:0001723,3.25e-08,3;UBERON:0001033,3.25e-08,3;UBERON:0010056,3.25e-08,3;UBERON:0002426,2.82e-07,1;UBERON:0003831,2.82e-07,1;UBERON:0003898,2.82e-07,1;UBERON:0004830,2.82e-07,1;UBERON:0003830,2.82e-07,1;UBERON:0005175,2.82e-07,1;UBERON:0001774,2.82e-07,1;UBERON:0001103,2.82e-07,1;UBERON:0010084,2.82e-07,1;UBERON:0002146,2.99e-07,1;UBERON:0005623,2.99e-07,1;UBERON:0002135,8.49e-07,1;UBERON:0007100,8.60e-07,27;UBERON:0001052,9.26e-07,4;UBERON:0001242,9.26e-07,4;UBERON:0001262,9.26e-07,4;UBERON:0004786,9.26e-07,4;UBERON:0004808,9.26e-07,4;UBERON:0001277,9.26e-07,4 | |||
|phase1_expression=0.908391896352783,0.642301571672949,0.986680828671798,1.0007329835313,0.893922188854576,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.545492241181669,0,0,0,0,0,0,0.36497735907583,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.82827216677626,0.590789906681404,0,0.368965315629341,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87467667973554,5.20744597416465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,0.434343920002738,0,0.895304816199478,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0.128139149255701,1.02341449813341,0,0,0,0,0,0,0,1.93375119346596,0.802025881213139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.84292754744295,5.58573735391895,6.43574099380586,0.574265537996172,0,0,0,0,0,0,0,0,0,0,0.495854746082934,0.192190067365106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0.608731130888112,0,0,0,0,0,0,0,0,0,0,0,0,0,5.64862804660675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,30.3271931092821,0,0,0,0.23874448473769,0,0,0,0,0.111308705022906,0,0,2.98871982376605,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0.179515288819544,0,0,4.94627004370057,0.533034776018635,0,0,0,0,0,0,0,0,0,0,8.62253735747039,8.87193422942574,0.995261931078505,0,0,0,0,0,0,14.4463976513782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0,0,2.93774963014692,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0,0,0,0,0,0,0,0,1.95497680890578,11.9163420486076,0,1.59743200399193,4.29226048136571,1.56220020209311,1.20930250476107,0,1.16495949527454,0,0,0,0,0,0,0,1.44677833618517,0,0.415440338029185,0,0,0,0,0,0.0524545881349981,0,0,0.383830394638891,0.714695326373367,0.662091970365432,0,0,0,0,0,0,0,0,0.439656701034247,0,0,0,0,0,0,0,0,0,0,0,0,213.798996724203,365.75655537912,617.592682755139,98.6896618436511,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0.400027764663154,0,0,0,0,1.28664954824955,0,0.226705925512272,0,0,0,0,0.877136198314828,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0.115525666150338,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0.992422356778588,0,0,0,0,0,0,0.177404740325278,0,0,0,0,0,0,0,0,0.280272163313789,0,0,0,0,0,0.23248285073625,0,0,0,0.17071847709395,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0.647428837187895,0.307988420568741,0,0.971421986118279,0,0,0,0,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253397002022874,0,0,0.0918948995348449,0,0.0757786982182394,0,0,0,6.61025343893041,5.23741749220229,0,0.869046000142011,0,0,0.808468755832877,1.74173398317569,2.39563310759697,0.404112318087525,0.0717222053926763,4.9899053481902,0,0,0,0,7.03922827210363,0.366724332548599,0,0,0,0 | |||
|short_description=p3@WDPCP | |||
}} |
Revision as of 03:28, 21 January 2014
Short description: | p3@WDPCP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_WDPCP_5end |
Coexpression cluster: | C29_mature_adipose_Adipocyte_breast_Lymphatic_vein_heart |
Association with transcript: | 13bp_to_ENST00000467687, ENST00000490935_5end |
EntrezGene: | WDPCP |
HGNC: | 28027 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of large intestine | 1.05e-12 | 2 |
fat cell | 1.47e-09 | 15 |
epithelial cell of Malassez | 2.42e-08 | 3 |
intestinal epithelial cell | 9.26e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
throat | 1.77e-12 | 2 |
valve | 1.54e-08 | 3 |
cardiac mesenchyme | 1.54e-08 | 3 |
cardial valve | 1.54e-08 | 3 |
tunica intima | 1.54e-08 | 3 |
heart layer | 1.54e-08 | 3 |
endocardium | 1.54e-08 | 3 |
endocardial cushion | 1.54e-08 | 3 |
presumptive endocardium | 1.54e-08 | 3 |
tongue | 3.25e-08 | 3 |
gustatory system | 3.25e-08 | 3 |
future tongue | 3.25e-08 | 3 |
chest muscle | 2.82e-07 | 1 |
respiratory system muscle | 2.82e-07 | 1 |
skeletal muscle of trunk | 2.82e-07 | 1 |
respiratory system skeletal muscle | 2.82e-07 | 1 |
thoracic segment muscle | 2.82e-07 | 1 |
chest organ | 2.82e-07 | 1 |
muscle of trunk | 2.82e-07 | 1 |
diaphragm | 2.82e-07 | 1 |
future diaphragm | 2.82e-07 | 1 |
pulmonary valve | 2.99e-07 | 1 |
semi-lunar valve | 2.99e-07 | 1 |
mitral valve | 8.49e-07 | 1 |
primary circulatory organ | 8.60e-07 | 27 |
rectum | 9.26e-07 | 4 |
intestinal mucosa | 9.26e-07 | 4 |
wall of intestine | 9.26e-07 | 4 |
gastrointestinal system mucosa | 9.26e-07 | 4 |
gastrointestinal system epithelium | 9.26e-07 | 4 |
intestinal epithelium | 9.26e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
heart disease | 6.14e-12 | 2 |