FFCP PHASE1:Hg19::chr2:234826016..234826024,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=79054 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17961 | |||
|TSSclassifier=not | |||
|UniProt=Q7Z2W7,Q3YFM7 | |||
|association_with_transcript=-18bp_to_ENST00000324695,NM_024080,uc002vvh.2,uc010fyj.2_5end | |||
|coexpression_cluster_id=C191 | |||
|description=CAGE_peak_1_at_TRPM8_5end | |||
|id=chr2:234826016..234826024,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000047;1.29e-36;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,6.06e-10,8 | |||
|ontology_enrichment_development_v019=UBERON:0009847;1.93e-07;3!UBERON:0003353;1.93e-07;3 | |||
|ontology_enrichment_disease=DOID:171!8.72e-08!10 | |||
|ontology_enrichment_disease_v019=DOID:171;8.12e-17;10!DOID:3193;1.98e-10;2!DOID:1909;1.98e-10;2!DOID:962;1.98e-10;2!DOID:3095;5.52e-08;22!DOID:2994;5.52e-08;22!DOID:1192;2.25e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:171,8.12e-17,10;DOID:3193,1.89e-10,2;DOID:962,1.89e-10,2;DOID:1909,2.07e-10,2;DOID:3095,5.52e-08,22;DOID:2994,5.52e-08,22;DOID:1192,2.19e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0001017!1.09e-11!82;UBERON:0000073!4.68e-11!94;UBERON:0001016!4.68e-11!94;UBERON:0005743!5.47e-11!86;UBERON:0001894!6.69e-11!7;UBERON:0006222!6.69e-11!7;UBERON:0000924!1.57e-10!173;UBERON:0006601!1.57e-10!173;UBERON:0000955!6.42e-08!69;UBERON:0006238!6.42e-08!69;UBERON:0004121!7.90e-08!169;UBERON:0001049!2.81e-07!57;UBERON:0005068!2.81e-07!57;UBERON:0006241!2.81e-07!57;UBERON:0007135!2.81e-07!57;UBERON:0002780!3.34e-07!41;UBERON:0001890!3.34e-07!41;UBERON:0006240!3.34e-07!41;UBERON:0003080!5.31e-07!42;UBERON:0005383!5.96e-07!3;UBERON:0005382!5.96e-07!3;UBERON:0002346!8.60e-07!90 | |||
|ontology_enrichment_uberon_v019=UBERON:0002346;7.75e-19;4!UBERON:0000923;7.75e-19;4!UBERON:0010316;7.75e-19;4!UBERON:0005291;7.75e-19;4!UBERON:0002050;2.80e-15;5!UBERON:0005423;2.80e-15;5!UBERON:0003714;1.98e-10;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003714,1.89e-10,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0.207322110030741,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.11464947822898,2.60279707715243,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.78494864019923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.06846023944879,0.291604613383254,0,0,0.241192877250816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.416024019039416,0,0,0,0,0,0,0,0,0,0,0,0.137041924646751,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0.271808412147228,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182248669974074,0,0,0,0,0,0,0,0,72.212264693949,0,0,0,0,0,0.170388021785422,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,8.34070146479063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.68633261622231,0,0.219284049578707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.56438312903453,0,0.123935764259002,8.9383186875719,0,0,0,0,0,0,0,0,0,0,0.138314504928436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.992422356778588,2.28632617667507,0,0,0.336283722218824,0,0.455324382702595,0,0,0.342976018874837,0,0,0,0,15.0706738272987,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.4443490908158,0.150962843566674,0,0,0,0,0,0,0.297046400327086,0,0,0,0,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413731983447581,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@TRPM8 | |||
}} |
Revision as of 09:18, 21 January 2014
Short description: | p1@TRPM8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_TRPM8_5end |
Coexpression cluster: | C191_leiomyoblastoma_Mast_parietal_acute_bone_neuroepithelioma_embryonic |
Association with transcript: | -18bp_to_ENST00000324695, NM_024080, uc002vvh.2, uc010fyj.2_5end |
EntrezGene: | TRPM8 |
HGNC: | 17961 |
UniProt: | Q7Z2W7Q3YFM7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 6.06e-10 | 8 |
Ontology term | p-value | n |
---|---|---|
neural tissue | 1.89e-10 | 2 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 8.12e-17 | 10 |
peripheral nerve sheath neoplasm | 1.89e-10 | 2 |
neurofibroma | 1.89e-10 | 2 |
melanoma | 2.07e-10 | 2 |
germ cell and embryonal cancer | 5.52e-08 | 22 |
germ cell cancer | 5.52e-08 | 22 |
peripheral nervous system neoplasm | 2.19e-07 | 3 |