FFCP PHASE1:Hg19::chr20:45216879..45216896,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=64849 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14430 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-149bp_to_ENST00000464518_5end | |||
|coexpression_cluster_id=C36 | |||
|description=CAGE_peak_9_at_SLC13A3_5end | |||
|id=chr20:45216879..45216896,- | |||
|ontology_enrichment_celltype=CL:0002575!3.01e-12!2;CL:0000945!8.36e-08!24;CL:0000826!8.36e-08!24 | |||
|ontology_enrichment_celltype_v019=CL:0000945;2.00e-19;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.88e-19,24;CL:0000826,1.88e-19,24;CL:0000838,1.73e-09,52;CL:0000542,2.52e-09,53;CL:0000051,2.52e-09,53 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:630!5.13e-07!1;DOID:0050177!5.13e-07!1;DOID:0050427!5.13e-07!1;DOID:2355!8.03e-07!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.17e-14!57;UBERON:0005068!1.17e-14!57;UBERON:0006241!1.17e-14!57;UBERON:0007135!1.17e-14!57;UBERON:0002616!4.48e-14!59;UBERON:0000955!2.50e-13!69;UBERON:0006238!2.50e-13!69;UBERON:0002020!3.40e-13!34;UBERON:0003528!3.40e-13!34;UBERON:0001893!4.25e-13!34;UBERON:0002780!6.94e-13!41;UBERON:0001890!6.94e-13!41;UBERON:0006240!6.94e-13!41;UBERON:0003080!1.55e-12!42;UBERON:0007023!3.06e-12!115;UBERON:0002148!6.49e-12!2;UBERON:0009662!6.49e-12!2;UBERON:0001869!3.04e-11!32;UBERON:0001950!3.60e-11!20;UBERON:0002791!5.50e-11!33;UBERON:0001017!8.78e-11!82;UBERON:0005743!3.75e-10!86;UBERON:0002619!4.00e-10!22;UBERON:0000073!6.29e-09!94;UBERON:0001016!6.29e-09!94;UBERON:0000153!6.32e-09!129;UBERON:0007811!6.32e-09!129;UBERON:0000956!7.42e-09!25;UBERON:0000203!7.42e-09!25;UBERON:0003075!7.97e-09!86;UBERON:0007284!7.97e-09!86;UBERON:0002346!2.58e-08!90;UBERON:0000988!3.19e-08!3;UBERON:0006331!3.19e-08!3;UBERON:0003056!4.50e-08!61;UBERON:0000033!2.93e-07!123;UBERON:0004177!4.36e-07!7;UBERON:0000029!6.08e-07!1;UBERON:0002336!7.60e-07!1;UBERON:0001018!7.60e-07!1;UBERON:0002473!7.60e-07!1;UBERON:0005340!7.60e-07!1;UBERON:0002316!7.60e-07!1;UBERON:0003544!7.60e-07!1;UBERON:0001020!7.60e-07!1;UBERON:0005970!7.60e-07!1;UBERON:0002437!7.60e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0001875;7.14e-26;2!UBERON:0006514;7.14e-26;2!UBERON:0009663;2.18e-08;7!UBERON:0002420;8.37e-07;9!UBERON:0000125;8.37e-07;9!UBERON:0007245;8.37e-07;9!UBERON:0002308;8.37e-07;9!UBERON:0010009;8.37e-07;9!UBERON:0010011;8.37e-07;9!UBERON:0000454;8.37e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001875,9.18e-26,2;UBERON:0006514,9.18e-26,2;UBERON:0009663,2.35e-08,7;UBERON:0002420,8.85e-07,9;UBERON:0000125,8.85e-07,9;UBERON:0007245,8.85e-07,9;UBERON:0002308,8.85e-07,9;UBERON:0010009,8.85e-07,9;UBERON:0010011,8.85e-07,9;UBERON:0000454,8.85e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.83392173795083,2.54511827294832,1.81034797021462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587403472388222,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0.334330152832435,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269604531922708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20084057741958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254019996197353,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517131825446202,0.13223260174269,0,0,0,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205116364240755,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0.0675375846183947,0,0,0.126831620387814,0,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0,0,0,0.111231401892069,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0999411559249289,0,0,0,0,0,0,0,0.135982980381829,0,0,0,0,0,0.126166424835079,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0.129177819672012,0.0620747142958579,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0.961705476909699 | |||
|short_description=p9@SLC13A3 | |||
}} |
Revision as of 11:43, 21 January 2014
Short description: | p9@SLC13A3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_SLC13A3_5end |
Coexpression cluster: | C36_B_b_splenic_plasma_xeroderma_adrenal_Burkitt |
Association with transcript: | -149bp_to_ENST00000464518_5end |
EntrezGene: | SLC13A3 |
HGNC: | 14430 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 1.88e-19 | 24 |
pro-B cell | 1.88e-19 | 24 |
lymphoid lineage restricted progenitor cell | 1.73e-09 | 52 |
lymphocyte | 2.52e-09 | 53 |
common lymphoid progenitor | 2.52e-09 | 53 |
Ontology term | p-value | n |
---|---|---|
globus pallidus | 9.18e-26 | 2 |
pallidum | 9.18e-26 | 2 |
telencephalic nucleus | 2.35e-08 | 7 |
basal ganglion | 8.85e-07 | 9 |
neural nucleus | 8.85e-07 | 9 |
nuclear complex of neuraxis | 8.85e-07 | 9 |
nucleus of brain | 8.85e-07 | 9 |
aggregate regional part of brain | 8.85e-07 | 9 |
collection of basal ganglia | 8.85e-07 | 9 |
cerebral subcortex | 8.85e-07 | 9 |