FFCP PHASE1:Hg19::chr20:49364047..49364052,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr20:49364047..49364052,+ | |||
|id=chr20:49364047..49364052,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.58e-11!254 | |||
|ontology_enrichment_celltype_v019=CL:0000313;5.06e-13;1!CL:0000159;3.81e-07;2!CL:1000415;3.81e-07;2!CL:0002535;3.81e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000313,8.64e-13,1;CL:1000415,3.70e-07,2;CL:0000159,4.98e-07,2;CL:0002535,5.28e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0008814;3.81e-07;2!UBERON:0010056;3.81e-07;2 | |||
|ontology_enrichment_disease=DOID:305!5.37e-31!106;DOID:0050687!8.48e-31!143;DOID:14566!3.40e-24!239;DOID:162!3.46e-24!235;DOID:299!1.49e-12!25;DOID:1749!3.04e-08!14;DOID:0050686!6.90e-08!137;DOID:7!7.99e-08!39 | |||
|ontology_enrichment_disease_v019=DOID:4468;2.96e-24;2!DOID:2152;5.06e-13;1!DOID:7;1.30e-10;39!DOID:299;9.00e-08;25!DOID:120;3.76e-07;27 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,1.02e-24,2;DOID:7,3.63e-14,39;DOID:2152,8.64e-13,1;DOID:305,6.80e-12,106;DOID:0050687,3.39e-10,143;DOID:299,8.23e-08,25;DOID:120,3.82e-07,27 | |||
|ontology_enrichment_uberon=UBERON:0002294!1.17e-07!7;UBERON:0001173!1.17e-07!7;UBERON:0004912!1.17e-07!7;UBERON:0005911!2.19e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0004911;5.06e-13;1!UBERON:0002294;1.33e-07;7!UBERON:0001173;1.33e-07;7!UBERON:0006562;3.81e-07;2!UBERON:0006955;3.81e-07;2!UBERON:0004909;3.81e-07;2!UBERON:0004801;3.81e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004911,8.64e-13,1;UBERON:0004909,4.98e-07,2;UBERON:0006955,5.28e-07,2;UBERON:0004801,5.28e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0.684372125364421,0,0.229240217243854,0,0.0787107813136792,0,0,0,0,0,0,0.154934401160603,0.568676929949686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393419540227666,0,0,0,0,0,0,0.111410456885174,0,0,0,0.128091319725675,0,0,0.276350017785848,0,0.14828656316206,0,0,0.113309342697566,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0.724122019413995,0,0,0,0,0,0,0,0,0.0945348171640679,0.221729397462564,0.087834785693126,0.392937226493138,0,0,0,0,0,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0.348581828608555,0.207322110030741,0.252320850875628,0.36497735907583,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35287282397425,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0.790204397959275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0.336255431980582,0.591092280605782,0.215627574859517,0.256686072559497,0,0,0.773288812777695,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.604297247958111,0.40101294060657,0.276242966807689,0,0,0,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,0,0.509752546090077,0,0.447749509444357,0.219259876645935,0,0.256450125116389,0,0,0.824328093181778,0.0915694648183434,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.847294206991012,0,0,0,0,0,0,0,0,0,0,0,0,0.961416640147258,0,0.980160863924127,0,0,0.142283686696828,0.159426272728822,0,0,0,0,0,0.228234679033192,0,0,0,0.1605880751037,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0,0.242721043499027,0,0.284136146806413,0.47748896947538,0.593929361665277,0,0,0.281338832821026,0.222617410045812,0.16480387422676,0.422250816255987,0.398495976502139,0.552567831062295,0.251932747854276,0.102268682502155,0.246169610922139,0,0.988551862620595,1.25314822272926,0,0.0986434056369336,0,0,0,0.0927680981618513,0,2.86470537193757,0.262379999988587,0,0.341380344856499,0.254253650292766,0.236387681767936,0.689486746482929,0.583209226766509,0,0,0.120596438625408,1.52581736317083,0.221158519862449,0.295547618953547,0,0.21787692703798,0.975966209950223,0,0.227884111694002,0.69169171316418,0.179515288819544,0.54323685961004,0,0,0,0,0,0,0.225595660617181,0,0.167821586975843,0,0.158936578980379,1.89898258075224,1.63232808159148,0.565412285735763,0,0,0.176915129006678,0,0,0,0,0,0,0,0.182454789215666,0.391329237864179,0.242780379534093,0.789168805698781,1.20990716048664,0.30607276163049,0,0,0,0,0,0,0,0,0,0.347119476670262,0.489961987071888,1.04471047896483,0.698906672968121,0.171986032471617,0.0967563312890851,0.365446585430928,0.0821154570532092,0.193978032976839,0,0.451961481561065,0,0,0.0633107959558787,1.36885967914362,0.561111741760736,0.426905989478705,0.599428828746391,0.432271251462318,0,0,0.14405479798815,0,0,0,0,0.203996435272644,0,0,0.410716136675979,0,0,0,0,0,0,0.199679000498991,0,0,0.0671834724867263,0,1.16495949527454,0,0,0.0674035438541849,0.196854963029498,0,0.795229689809303,0.136203406111576,0,0.137539436597234,0,0.2249738915515,0,0.0607495566580247,0,0.551639951094387,0.524545881349981,0.211200673038813,0.179287339332845,0.191915197319445,0,0,1.77987976358325,0,0,0,0,0.164185041498678,0,0,0,0,0,0.26446520348538,0.513260513652988,0,0,0.157204305099666,0,0,0,0.243585196761792,0.638341257770182,0,0.2506898940227,0,0,0,0,0,0.1251909307065,0,0.110929051536852,0,1.66018361923477,0,0,0,0,0,0,0,0,0,0,0,0.889811221596536,0,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0,0,0,0,0,0,0,0.192619830407303,0.857766365499703,0.260994291965212,0,0.463044948647668,0.489473409012935,0.179088841081487,0,0.219284049578707,0,0.38582807654183,0.337884881306145,0.512483037175893,0,0,0,0,0,0,0,0.245772908753719,0.211312123358627,0.19998739585493,0.213383459388282,0.172214979660816,0,0,0.279759015438889,0,0.127894371303652,0,0.943595651135378,0.655257829152084,0.33946505990805,0,4.58562327758308,0,0,0.23658523500376,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0.0981477185010256,0.11796972334774,0,1.73288499225507,0,0,0.198916222116275,0,0.20170506870352,0,0.261906694481422,0.163771917510097,0.739280431085226,0.0675375846183947,0,0.620060389503552,0.0634158101939068,0.546974809018219,0,0,0.175871244359621,1.02209942111676,0.535701835878287,0,0,0.455324382702595,0.620916591138472,0,0,0.203909198930495,0.0657727735628491,0.236387681767936,0.222462803784138,0.078493092850514,0.157115589916002,0,0,0.863710364874486,2.38875843943525,0.214429632529969,0.316027223465453,0.813689977576877,0,0,0,0.17071847709395,0.691259661814092,0,0.1183320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| |||
|short_description=p@chr20:49364047..49364052,+ | |||
}} |
Revision as of 12:05, 21 January 2014
Short description: | p@chr20:49364047..49364052, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | No |
Description: | CAGE_peak_at_chr20:49364047..49364052, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
serous secreting cell | 8.64e-13 | 1 |
epithelial cell of gall bladder | 3.70e-07 | 2 |
seromucus secreting cell | 4.98e-07 | 2 |
epithelial cell of cervix | 5.28e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
epithelium of female gonad | 8.64e-13 | 1 |
epithelium of gonad | 4.98e-07 | 2 |
uterine epithelium | 5.28e-07 | 2 |
cervix epithelium | 5.28e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 1.02e-24 | 2 |
disease of anatomical entity | 3.63e-14 | 39 |
ovary epithelial cancer | 8.64e-13 | 1 |
carcinoma | 6.80e-12 | 106 |
cell type cancer | 3.39e-10 | 143 |
adenocarcinoma | 8.23e-08 | 25 |
female reproductive organ cancer | 3.82e-07 | 27 |