FFCP PHASE1:Hg19::chr21:40720974..40720994,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3150 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4984 | |||
|TSSclassifier=strong | |||
|UniProt=A6NL93,F2Z2W6 | |||
|association_with_transcript=0bp_to_ENST00000380748,ENST00000443046,ENST00000463631,ENST00000464078,ENST00000491183_5end | |||
|description=CAGE_peak_3_at_HMGN1_5end | |||
|id=chr21:40720974..40720994,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!2.49e-16!235;DOID:14566!5.16e-15!239;DOID:2531!7.80e-09!51;DOID:0060083!7.80e-09!51;DOID:0050687!1.74e-08!143;DOID:1240!4.43e-08!39;DOID:0050686!5.78e-07!137;DOID:8692!8.25e-07!31 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,2.82e-16,235;DOID:14566,5.54e-15,239;DOID:2531,7.76e-09,51;DOID:0060083,7.76e-09,51;DOID:0050687,1.86e-08,143;DOID:1240,4.41e-08,39;DOID:0050686,6.31e-07,137;DOID:8692,8.22e-07,31 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| |||
|short_description=p3@HMGN1 | |||
}} |
Revision as of 13:49, 21 January 2014
Short description: | p3@HMGN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_HMGN1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000380748, ENST00000443046, ENST00000463631, ENST00000464078, ENST00000491183_5end |
EntrezGene: | HMGN1 |
HGNC: | 4984 |
UniProt: | A6NL93F2Z2W6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cancer | 2.82e-16 | 235 |
disease of cellular proliferation | 5.54e-15 | 239 |
hematologic cancer | 7.76e-09 | 51 |
immune system cancer | 7.76e-09 | 51 |
cell type cancer | 1.86e-08 | 143 |
leukemia | 4.41e-08 | 39 |
organ system cancer | 6.31e-07 | 137 |
myeloid leukemia | 8.22e-07 | 31 |