FFCP PHASE1:Hg19::chr3:12329358..12329393,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5468 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9236 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000309576_5end | |||
|description=CAGE_peak_3_at_PPARG_5end | |||
|id=chr3:12329358..12329393,+ | |||
|ontology_enrichment_celltype=CL:0000860!5.01e-08!45;CL:0002194!3.30e-07!63;CL:0000576!3.30e-07!63;CL:0000040!3.30e-07!63;CL:0000559!3.30e-07!63;CL:0002057!3.32e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.35e-11;33!CL:0002057;1.35e-11;33!CL:0000473;8.36e-11;39!CL:0000234;8.36e-11;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,3.78e-08,48;CL:0000234,3.78e-08,48;CL:0000860,8.77e-07,42;CL:0002057,8.77e-07,42 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000926!1.34e-17!448;UBERON:0004120!1.34e-17!448;UBERON:0006603!1.34e-17!448;UBERON:0000062!4.47e-16!511;UBERON:0000467!7.73e-15!625;UBERON:0000468!1.15e-14!659;UBERON:0000480!1.52e-14!626;UBERON:0002050!6.35e-14!605;UBERON:0005423!6.35e-14!605;UBERON:0000923!8.83e-14!604;UBERON:0005291!8.83e-14!604;UBERON:0006598!8.83e-14!604;UBERON:0002532!8.83e-14!604;UBERON:0000922!4.92e-13!612;UBERON:0000481!1.20e-12!347;UBERON:0003104!3.83e-12!238;UBERON:0009142!3.83e-12!238;UBERON:0004119!2.59e-11!169;UBERON:0000925!2.59e-11!169;UBERON:0006595!2.59e-11!169;UBERON:0001007!9.55e-10!155;UBERON:0001555!9.55e-10!155;UBERON:0007026!9.55e-10!155;UBERON:0002100!1.23e-09!216;UBERON:0005256!3.84e-09!143;UBERON:0000077!6.72e-09!130;UBERON:0004921!1.18e-08!129;UBERON:0004185!1.18e-08!129;UBERON:0005177!2.58e-07!107;UBERON:0001048!5.60e-07!168;UBERON:0003103!7.12e-07!69 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003104,6.85e-11,160;UBERON:0009142,6.85e-11,160;UBERON:0004119,6.92e-09,160;UBERON:0000925,6.92e-09,160;UBERON:0006595,6.92e-09,160;UBERON:0002100,2.45e-08,199;UBERON:0005256,1.75e-07,122;UBERON:0001007,2.61e-07,145;UBERON:0001555,2.61e-07,145;UBERON:0007026,2.61e-07,145;UBERON:0000922,3.89e-07,592;UBERON:0000926,5.67e-07,315;UBERON:0004120,5.67e-07,315;UBERON:0006603,5.67e-07,315 | |||
|phase1_expression=1.2717486548939,12.203729861786,3.38290569830331,3.00219895059391,5.81049422755474,1.74467704820074,20.2639902534648,10.1075179748293,43.8791855375729,1.47440361900905,2.79120467188971,8.30077214094655,6.06664049925443,10.8914390604841,16.5698687863958,1.34465029290355,0,2.19093027116212,0.487932798790507,3.20114750999649,9.58803248847989,1.88072832886853,0.572471974262113,0.410623275218653,1.75759695432724,0,0.0821005894499457,0.236132343941038,0,0.383829398097213,0.619264493264304,0,0.90361775633475,4.80680213216824,0,0,0,0,0.200544447470142,0.868043482863407,5.82180233023803,4.53451132426571,2.83333124397605,6.10672602874172,12.8477820854195,9.94594650870046,14.4106002881524,24.2589053932877,30.6609307186153,18.7000055009398,17.4189280439788,12.0605937243178,12.0660988257816,8.39130088658974,4.06279459783025,8.094420600332,14.191119803008,6.96642801779762,7.95818120164347,6.09765151444578,8.31138263538754,6.59702600373432,8.17800996248691,9.37694451171927,8.41606792022894,11.3477044938228,9.34233373493363,20.6023905510529,12.5155900420848,13.031330682307,6.65939452896706,5.89244217580104,6.96217252369946,0,0.212604299965044,0,0.673971786878971,0.150176892841506,0.64290234678832,0.570025487482497,0.19891667719909,0.365328307529268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411202997999018,0,0,0,0,1.22551502573691,0.294605907474837,0,0,1.0247305578054,1.1705341280389,0,0.552700035571697,0,0,0,0,0.113309342697566,0.766440987203842,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,43.8852359365131,6.03630773733273,1.79007586580942,0,0,0.869079113764942,0,0.973269740605272,4.34860158954712,6.87361132133948,5.53359149866694,1.96468613246569,0.364295288292542,1.48313777113772,1.62273696827342,2.78607579678828,2.6591592103773,0,0,0,0.596287222100115,6.02164216574287,1.73570250803797,1.13061588384802,1.25849830862972,0.550236083880135,1.25396979922086,3.6178346283706,3.5576626268671,4.35136796594071,3.22263453687318,6.0821768457481,26.3587022152023,0.367663080345869,0.81014194788176,0.357198913136319,0,0.225222960966644,0,0,0.183201743930407,0,0,0.436094052142534,0,0.379891534993739,0.926864265692532,1.43418310374407,3.19201543978521,0.560677600142307,2.1349799145941,0.49333509683432,10.5811752035921,5.52313755485721,5.39424280274414,3.32986340818849,8.06646294271999,16.168178796532,15.608003841516,11.9799082524334,15.6921114579391,18.3197817884273,18.2916427135989,16.1518427707586,17.148950385411,10.4409169715003,29.1378702915659,2.37600571456411,1.23633464639278,4.55080680969013,5.03032699271367,9.76349460933584,11.0104297487328,8.31192346452549,0.438977620880838,0.612975591598039,5.25833206173089,2.38207584636044,0,0.85422955527427,0.847727604638247,0,0,0,0.37223371266318,0.168776332241266,0.292311015483596,0.252433774244115,0.644349290496095,1.61646056818812,0,0,0.339121184620975,0.193260853163297,0,0,0,0.265059536642971,0,0.207322110030741,0,0,0,0.643240938192885,2.76269842704961,4.17931135228781,8.66255378003503,2.48444280083672,3.03452442140583,2.89213235860178,3.52940712743661,3.7039505495709,2.84724742933316,1.8876383142423,3.13954344200554,3.46272441251751,5.90524363699719,0,2.057870056657,0,1.26755034821831,6.87979051674338,3.54473944008842,0,6.14942192715568,7.20584803253807,0.109750285408626,1.1240175325762,0.100528972411631,0.370353780634118,8.47101593806844,22.8785652761507,8.6598805215164,3.014190529352,2.23076519048061,6.92958949253154,11.5746378144153,9.89321591619911,1.58040879591855,0.858486162094873,2.70838706696137,2.34004265139238,3.86441021950693,0,0,0,1.79117045405697,0,0.383382679165211,0,0,0,0.144119953416961,0,0.952468414382536,2.29193055334967,1.17217447210047,6.84289784090821,0.822619941626588,0,0.285826432630578,5.38229204857731,1.74384027533312,5.2803565791084,0.129271715757778,10.7296933755565,9.298330278116,2.6593811658487,3.12022310734098,7.20180647933998,11.3479305618623,6.66055447540248,4.43231780340257,3.25572963234866,2.46972101034231,10.4235578973995,3.909311436168,0,2.41151501647669,2.61460037580088,2.19940580600526,13.378615870531,11.0496560115068,8.43335757932127,1.4377491329495,1.14861935834114,7.13184525203592,3.32997005335432,6.36976599906189,1.07436577943937,0,0.197030760201927,0,0,0,0,0,0,0,0,0,0,9.20186187893549,26.0088670951032,13.291986161287,3.95144636908534,1.96271887676878,2.99634588564476,2.10854546986884,3.00946099727719,2.27407504055985,17.5904221197258,0.664225598535437,1.10621501125022,6.16873662723388,1.95801157462741,2.74514739048685,0,0.215714200818617,0.320182673410333,0.606255142892519,3.32870879020994,3.0239029332968,0,0.306923946576125,0,0.640695746278505,0,1.44768529029247,0,4.78050050788232,3.01854933032316,6.24166385704949,4.15403543346897,9.18061989833678,1.32945394550784,2.40607764363942,11.3259616391152,6.54442354538258,10.925470080403,5.76947425821466,3.60959690325929,4.23584354074281,2.35304930753057,11.6911379722609,3.27210049567915,2.27466768141793,1.87103075804167,4.53423423814493,3.08454505380579,4.06419656315779,3.01013864312912,6.62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| |||
|short_description=p3@PPARG | |||
}} |
Revision as of 17:25, 21 January 2014
Short description: | p3@PPARG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PPARG_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000309576_5end |
EntrezGene: | PPARG |
HGNC: | 9236 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 3.78e-08 | 48 |
phagocyte | 3.78e-08 | 48 |
classical monocyte | 8.77e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.77e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
mesenchyme | 6.85e-11 | 160 |
entire embryonic mesenchyme | 6.85e-11 | 160 |
endoderm-derived structure | 6.92e-09 | 160 |
endoderm | 6.92e-09 | 160 |
presumptive endoderm | 6.92e-09 | 160 |
trunk | 2.45e-08 | 199 |
trunk mesenchyme | 1.75e-07 | 122 |
digestive system | 2.61e-07 | 145 |
digestive tract | 2.61e-07 | 145 |
primitive gut | 2.61e-07 | 145 |
embryo | 3.89e-07 | 592 |
mesoderm | 5.67e-07 | 315 |
mesoderm-derived structure | 5.67e-07 | 315 |
presumptive mesoderm | 5.67e-07 | 315 |