FFCP PHASE1:Hg19::chr3:16025137..16025147,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C58 | |||
|description=CAGE_peak_at_chr3:16025137..16025147,+ | |||
|id=chr3:16025137..16025147,+ | |||
|ontology_enrichment_celltype=CL:0000148!4.00e-18!10;CL:0000541!4.00e-18!10;CL:0002620!2.40e-15!23;CL:0000710!6.97e-15!20;CL:0000147!9.29e-13!14;CL:0000075!1.10e-10!27;CL:0002077!1.24e-10!33;CL:0000055!6.12e-10!180;CL:0000333!1.09e-09!41;CL:0000057!1.73e-09!75;CL:0000133!3.96e-09!59;CL:0000221!1.50e-08!71;CL:0002567!6.53e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0000148;2.16e-63;10!CL:0002567;4.89e-53;3!CL:0000147;1.40e-45;14!CL:0002566;9.91e-41;1!CL:0000710;3.39e-32;20!CL:0000075;4.41e-24;27!CL:0002077;1.69e-17;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,1.84e-63,10;CL:0000541,1.84e-63,10;CL:0002567,3.75e-53,3;CL:0000147,1.25e-45,14;CL:0002566,9.91e-41,1;CL:0000710,3.13e-32,20;CL:0000075,4.16e-24,27;CL:0002077,2.57e-19,34;CL:0000333,1.94e-15,41;CL:0000133,4.30e-11,59;CL:0000221,2.94e-09,72 | |||
|ontology_enrichment_development_v019=CL:0000133;5.84e-08;59 | |||
|ontology_enrichment_disease=DOID:1909!3.68e-11!2 | |||
|ontology_enrichment_disease_v019=DOID:1909;5.69e-21;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,6.96e-21,2 | |||
|ontology_enrichment_uberon=UBERON:0002097!7.87e-15!40;UBERON:0002199!6.55e-13!45;UBERON:0002416!6.55e-13!45;UBERON:0003102!2.08e-09!95 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0.312160076830321,0,0.298897361103602,0,0,0,0.61246251376468,0,0.206651562351531,0,0,0,0,0.168336113954066,0,0.277064115484183,0,0,0,0,0,0,0,0.300091096084402,0.103052529238439,0,0.18611685633159,0.168776332241266,0.0974370051611986,0,0,0.323292113637624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.92090313743978,1.90994212779139,0,1.71072446022705,0.822619941626588,0.300343057843917,4.28739648945867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0.157702415033935,0,0,0,0,0,0,0.434418072340414,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20453736500431,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485560759068186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171986032471617,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303298235083296,1.42732666772484,0,0,0,0,0,0,0.189403005275089,0,0,0.457680136793847,0,0.15543720058278,0,0.159296767163702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303859956177382,0,0,0,0.163565394255844,0,0,0,0,0,0,0,0.552317850755522,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118920090777569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr3:16025137..16025147,+ | |||
}} |
Revision as of 17:41, 21 January 2014
Short description: | p@chr3:16025137..16025147, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:16025137..16025147, + |
Coexpression cluster: | C58_Melanocyte_melanoma_retina_Retinal_eye_migratory_H9 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 1.84e-63 | 10 |
melanoblast | 1.84e-63 | 10 |
light melanocyte | 3.75e-53 | 3 |
pigment cell | 1.25e-45 | 14 |
dark melanocyte | 9.91e-41 | 1 |
neurecto-epithelial cell | 3.13e-32 | 20 |
columnar/cuboidal epithelial cell | 4.16e-24 | 27 |
ecto-epithelial cell | 2.57e-19 | 34 |
migratory neural crest cell | 1.94e-15 | 41 |
neurectodermal cell | 4.30e-11 | 59 |
ectodermal cell | 2.94e-09 | 72 |
Ontology term | p-value | n |
---|---|---|
melanoma | 6.96e-21 | 2 |