FFCP PHASE1:Hg19::chr3:69591862..69591871,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23150 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24886 | |||
|TSSclassifier=strong | |||
|UniProt=C9JA15 | |||
|association_with_transcript=-128bp_to_ENST00000459638_5end | |||
|description=CAGE_peak_23_at_FRMD4B_5end | |||
|id=chr3:69591862..69591871,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000047;1.25e-08;2 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.19e-14!115;UBERON:0002020!2.93e-13!34;UBERON:0003528!2.93e-13!34;UBERON:0002791!3.55e-12!33;UBERON:0001893!1.20e-11!34;UBERON:0001049!2.14e-11!57;UBERON:0005068!2.14e-11!57;UBERON:0006241!2.14e-11!57;UBERON:0007135!2.14e-11!57;UBERON:0000073!1.60e-10!94;UBERON:0001016!1.60e-10!94;UBERON:0001017!2.56e-10!82;UBERON:0005743!4.50e-10!86;UBERON:0001869!4.80e-10!32;UBERON:0002780!1.10e-09!41;UBERON:0001890!1.10e-09!41;UBERON:0006240!1.10e-09!41;UBERON:0003075!1.35e-09!86;UBERON:0007284!1.35e-09!86;UBERON:0002308!1.91e-09!9;UBERON:0000125!1.91e-09!9;UBERON:0003080!2.58e-09!42;UBERON:0002616!9.17e-09!59;UBERON:0002346!9.54e-09!90;UBERON:0000955!2.23e-08!69;UBERON:0006238!2.23e-08!69;UBERON:0002619!3.13e-08!22;UBERON:0001950!8.40e-08!20;UBERON:0004121!2.85e-07!169;UBERON:0009663!4.41e-07!7;UBERON:0000956!7.42e-07!25;UBERON:0000203!7.42e-07!25;UBERON:0000924!8.03e-07!173;UBERON:0006601!8.03e-07!173 | |||
|ontology_enrichment_uberon_v019=UBERON:0002134;2.56e-15;1!UBERON:0005208;2.56e-15;1!UBERON:0004145;2.56e-15;1!UBERON:0005946;2.56e-15;1!UBERON:0005965;2.56e-15;1!UBERON:0002078;2.56e-15;1!UBERON:0002148;2.57e-08;2!UBERON:0002081;2.57e-08;2!UBERON:0002133;2.57e-08;2!UBERON:0006331;2.57e-08;2!UBERON:0009662;2.57e-08;2!UBERON:0000922;3.87e-07;49!UBERON:0001950;9.68e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002134,2.06e-15,1;UBERON:0005208,2.06e-15,1;UBERON:0005946,2.06e-15,1;UBERON:0005965,2.06e-15,1;UBERON:0002078,2.06e-15,1;UBERON:0002081,2.31e-08,2;UBERON:0002133,2.31e-08,2;UBERON:0010227,2.31e-08,2;UBERON:0002148,2.87e-08,2;UBERON:0006331,2.87e-08,2;UBERON:0009662,2.87e-08,2;UBERON:0003528,8.94e-07,34;UBERON:0002020,8.94e-07,34;UBERON:0001950,9.87e-07,20 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0.919421224478927,0.30120591877825,0,0,0,0,0.553995408531877,0.200544447470142,0.217010870715852,0.223915474239924,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0.209658645508376,0.22465726229299,0,0.48217676009124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0,0,0.130979075497713,0,0.370784442784429,0,0.174129737299267,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211931901159562,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265059536642971,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0.234004265139238,0.297262324577456,0,0,0,0.0895585227028483,0,0,0,0.088048434013226,0.414656231081544,0.288239906833923,0.12624243342638,0,0.763976851116555,0,0,0.102827492703324,0.300343057843917,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.20559415430487,0.773288812777695,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,1.38121483403844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0.27470839445503,0.247528499761764,0.574265537996172,0,0,0,0,0,0,0.107420244868274,0,0,0,0,0.384380134730212,1.14851441245126,0.4046311234222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,0.670302275535787,2.17781969722645,0.0941438007767792,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0.747768497892312,0,0.245040215981032,0,0,0,0,0,0,0,0,0.561594356226918,0,0,5.01268954180134,0,0,0,0.425846237690326,0,0.614481528616916,0.223676107892416,0.166849141711909,0,0,0,0.270455678475983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568967241427498,0,0,0,0,0,0.885741385813839,0.361789315876224,0,0,0,0,0,0.83654246567162,0.692552326534174,0,0.23056390438806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.269604531922708,0,0.234264445725339,0,0.782658475728359,0,0,0,2.14250933141343,0.252746318513952,0,0,0,0,0.313932918407225,0,0,0.138674673013139,0,0,0,0.52418000472609,0,0,0,0,0,0,0.451961481561065,0,0,0.0633107959558787,0,0,0,0,0,0,0.686379991447858,0,0,0.235694034616795,0,0,0.203996435272644,0,0,0.684526894459965,0,0,0,0.837847203816763,0.229160424011684,1.43574604915363,0,0.429226048136571,0.446342914883745,0.201550417460179,0,0,0,0,0,0.0984274815147488,0,0.795229689809303,0,0,0,0,0.2249738915515,0,0.121499113316049,0.670869375198532,0.0788057072991982,0.0524545881349981,0,0.179287339332845,0.959575986597226,0,0,0,0,0,0,0,0,0,0,0,0,0.387848869084652,1.19009341568421,0,0,0.320362237703084,0.943225830597996,0.828478110694391,0,0,0,0.638341257770182,0,0,0,0,0,0,0.122026264901963,0.1251909307065,0,0.221858103073705,0.248385611765534,0.691743174681154,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0.839277046316667,0,0.383683113910955,0.431299245586727,0,0.873677105536111,0,0,0,0,0,1.73495839002757,0,0,0,0.256916900385838,0,0.159633859057151,0.205116364240755,4.03314713954749,0.0691572524642179,0,0,0,0.471878893390961,0,0,0,0.690359926060101,0,0.300841313397029,0,0,0,0,0,0,0,0.206686796501184,0.443910671357348,4.92277328116398,0,0,0,0.255524855279191,0,0,0,0,0,0,0,0.203909198930495,0,0,0,0.156986185701028,0.628462359664008,0,0,0,0,0.142953088353313,0,0,0.173858272302579,0,0.207216164163037,0.6828739083758,4.14755797088455,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0.102662806856247,0,0.485710993059139,0.467878926924211,0,0,0.67767649223376,0,0,0,0.218559560503957,0,0.245148321753905,0,0.588925401344836,0.594092800654172,0,0,0.0939839179798536,0.709036767709349,0,0,0,0,0,0,0.430018749454354,0,0.0679914901909147,2.61810414204226,0,0,0,0,0,0.218531143927391,0.126698501011437,0.101988829741982,0,0,0,0.151557396436479,0.267964130156178,0,0,0.639701945702943,0.952257725854961,0,0.0620747142958579,0.112131862580613,0.636471582781649,1.41482032270754,0,0,0,0.286888821570705,0,0.162806537221949,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p23@FRMD4B | |||
}} |
Revision as of 19:43, 21 January 2014
Short description: | p23@FRMD4B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_23_at_FRMD4B_5end |
Coexpression cluster: | NA |
Association with transcript: | -128bp_to_ENST00000459638_5end |
EntrezGene: | FRMD4B |
HGNC: | 24886 |
UniProt: | C9JA15 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
tricuspid valve | 2.06e-15 | 1 |
right atrium valve | 2.06e-15 | 1 |
outflow tract of atrium | 2.06e-15 | 1 |
outflow part of right atrium | 2.06e-15 | 1 |
right cardiac atrium | 2.06e-15 | 1 |
cardiac atrium | 2.31e-08 | 2 |
atrioventricular valve | 2.31e-08 | 2 |
future cardiac atrium | 2.31e-08 | 2 |
locus ceruleus | 2.87e-08 | 2 |
brainstem nucleus | 2.87e-08 | 2 |
hindbrain nucleus | 2.87e-08 | 2 |
brain grey matter | 8.94e-07 | 34 |
gray matter | 8.94e-07 | 34 |
neocortex | 9.87e-07 | 20 |