FFCP PHASE1:Hg19::chr3:159570877..159570888,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=29970 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15678 | |||
|TSSclassifier=weak | |||
|UniProt= | |||
|association_with_transcript=96bp_to_ENST00000482885_5end | |||
|description=CAGE_peak_43_at_SCHIP1_5end | |||
|id=chr3:159570877..159570888,+ | |||
|ontology_enrichment_celltype=CL:0002139!2.70e-11!24;CL:0005020!6.00e-08!6;CL:0002138!6.00e-08!6;CL:0005022!6.00e-08!6;CL:0000115!1.16e-07!35 | |||
|ontology_enrichment_celltype_v019=CL:0002138;3.18e-44;6!CL:0002541;2.35e-23;3!CL:0002139;2.92e-17;24!CL:0000115;2.01e-09;36!CL:0002078;1.63e-07;45!CL:0002144;9.11e-07;3!CL:0002166;9.11e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0005020,3.19e-44,6;CL:0002138,3.19e-44,6;CL:0005022,3.19e-44,6;CL:0002541,2.35e-23,3;CL:0002139,2.92e-17,24;CL:0000115,1.55e-11,36;CL:0002078,3.10e-09,45;CL:0000213,3.67e-07,58;CL:0000215,3.67e-07,58;CL:0002144,9.12e-07,3 | |||
|ontology_enrichment_development_v019=CL:0005022;3.18e-44;6!UBERON:0004140;2.66e-18;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.99e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0001473;2.61e-33;8!UBERON:0004536;2.61e-33;8!UBERON:0006558;2.61e-33;8!UBERON:0002465;9.46e-27;10!UBERON:0003124;2.35e-23;3!UBERON:0000920;2.35e-23;3!UBERON:0002146;1.03e-17;1!UBERON:0005623;1.03e-17;1!UBERON:0002405;3.83e-10;27!UBERON:0005631;1.13e-07;10!UBERON:0000158;1.13e-07;10!UBERON:0003978;9.11e-07;3!UBERON:0010523;9.11e-07;3!UBERON:0000946;9.11e-07;3!UBERON:0001915;9.11e-07;3!UBERON:0001982;9.11e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001473,2.61e-33,8;UBERON:0004536,2.61e-33,8;UBERON:0006558,2.61e-33,8;UBERON:0002465,9.47e-27,10;UBERON:0000920,2.35e-23,3;UBERON:0002146,6.23e-18,1;UBERON:0005623,6.23e-18,1;UBERON:0003124,1.39e-10,7;UBERON:0000055,1.44e-08,68;UBERON:0002049,1.95e-07,78;UBERON:0007798,1.95e-07,78;UBERON:0004535,4.74e-07,109;UBERON:0001009,7.55e-07,112;UBERON:0003978,7.70e-07,3;UBERON:0009751,7.70e-07,3;UBERON:0000946,7.70e-07,3;UBERON:0002523,7.70e-07,3;UBERON:0005983,7.70e-07,3;UBERON:0002165,7.70e-07,3;UBERON:0002062,7.70e-07,3;UBERON:0007280,7.70e-07,3;UBERON:0010523,9.12e-07,3;UBERON:0001915,9.12e-07,3;UBERON:0001982,9.12e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0.37129905888014,0,0,0,0,0,0,0,0,0,0.273748850145768,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0.39752481473341,0,0,0.56530794192401,0,0.275118041940067,0.208994966536811,0.775250277507987,2.84613010149368,2.00832367658802,0,0,1.22031028774085,0,0.81014194788176,0.982297011124877,0.673588117878509,0.900891843866578,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0.134710672069688,0.163461903113459,0,0,0,0.312160076830321,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0.355009592516614,0,0,0,0.272746120590835,0.286804595389004,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0,0,0,0,0,0,0,0.185176890317059,0,0,0,0.231860809950154,0.352226082707465,1.01056513432752,0,1.33177906564219,0,0,0,0,0,0,1.00789276919316,0.283550194484773,0.447792613514241,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0.271265023699736,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0.105551628892876,0,0.340187410553031,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0.103041011647722,0.0915694648183434,0,0.574265537996172,0,0,0,0,0,0,0,0,0.0852266274161009,0,0.165284915360978,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0.438450885253763,0,0,0.202910376962704,0,0,0,0.294747123039363,0.35667105148125,0,0,0,0,0,0.192444225451024,0,0,0,0,0,0,0,0.507447609232169,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0.423347165447766,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0.284136146806413,0.47748896947538,0,0,0,0.140669416410513,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0.438770794307945,0,0,0.153900517007594,0,0,0,0,2.55200927785536,0.183195186803725,3.19820865611181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22206028986725,0,0,0,0.067401132980677,0,0,0,0,0,0,1.20990716048664,0,0.063186579628488,0,0.103688191397247,0,0,0,0,0,0,0,0.0979923974143777,0,0,0.687944129886466,0,0,0,0.290967049465258,0,0,0.274083849293502,0,0.0633107959558787,0,0,0.213452994739353,0,0,0,0,0,0,0,0.135904206073614,0,0,0,0,0,0,0,0,0,1.3749625440701,0.717873024576814,0,0.429226048136571,0.669514372325618,4.36692571163721,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.262272940674991,0.105600336519406,0,0.191915197319445,0,0.662091970365432,0,0,0.864221491201268,0,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0.78602152549833,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468334905806882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0.463044948647668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0.567515953566836,0,0,0,0.255788742607303,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0.496211178389294,0,0,0,0.336283722218824,0,0,0.532214220975833,0,0,0,0.131545547125698,0,0,0.313972371402056,0,0,0,0.215927591218621,0,0,0,0,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0.718639647993729,0,0,0,0,0,0,0,0,0.154348316215889,0.437119121007915,0,0,0,0,0,0,0,0.469919589899268,0.193373663920732,0,0,0,0,0.730336388246517,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0.203977659483963,0,0.0918948995348449,0,0.0757786982182394,0,0,0,0,0.476128862927481,0,0.124149428591716,0,0.0636471582781649,0,0.217716747896961,0.684466602170562,0,0.0717222053926763,0,0,0.106727345877715,0,0,0,0.244482888365733,0,0,0,0 | |||
|short_description=p43@SCHIP1 | |||
}} |
Revision as of 22:20, 21 January 2014
Short description: | p43@SCHIP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_43_at_SCHIP1_5end |
Coexpression cluster: | NA |
Association with transcript: | 96bp_to_ENST00000482885_5end |
EntrezGene: | SCHIP1 |
HGNC: | 15678 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphangioblast | 3.19e-44 | 6 |
endothelial cell of lymphatic vessel | 3.19e-44 | 6 |
vascular lymphangioblast | 3.19e-44 | 6 |
chorionic membrane mesenchymal stem cell | 2.35e-23 | 3 |
endothelial cell of vascular tree | 2.92e-17 | 24 |
endothelial cell | 1.55e-11 | 36 |
meso-epithelial cell | 3.10e-09 | 45 |
lining cell | 3.67e-07 | 58 |
barrier cell | 3.67e-07 | 58 |
capillary endothelial cell | 9.12e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
lymphatic vessel | 2.61e-33 | 8 |
lymph vasculature | 2.61e-33 | 8 |
lymphatic part of lymphoid system | 2.61e-33 | 8 |
lymphoid system | 9.47e-27 | 10 |
egg chorion | 2.35e-23 | 3 |
pulmonary valve | 6.23e-18 | 1 |
semi-lunar valve | 6.23e-18 | 1 |
chorion | 1.39e-10 | 7 |
vessel | 1.44e-08 | 68 |
vasculature | 1.95e-07 | 78 |
vascular system | 1.95e-07 | 78 |
cardiovascular system | 4.74e-07 | 109 |
circulatory system | 7.55e-07 | 112 |
valve | 7.70e-07 | 3 |
cardiac mesenchyme | 7.70e-07 | 3 |
cardial valve | 7.70e-07 | 3 |
tunica intima | 7.70e-07 | 3 |
heart layer | 7.70e-07 | 3 |
endocardium | 7.70e-07 | 3 |
endocardial cushion | 7.70e-07 | 3 |
presumptive endocardium | 7.70e-07 | 3 |
microcirculatory vessel | 9.12e-07 | 3 |
endothelium of capillary | 9.12e-07 | 3 |
capillary | 9.12e-07 | 3 |