FFCP PHASE1:Hg19::chr4:57897281..57897294,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr4:57897281..57897294,- | |||
|id=chr4:57897281..57897294,- | |||
|ontology_enrichment_celltype=CL:0000359!1.96e-08!32;CL:0000055!2.80e-08!180;CL:0000680!2.05e-07!57;CL:0000056!2.05e-07!57;CL:0000355!2.05e-07!57;CL:0000192!2.85e-07!42;CL:0000514!2.85e-07!42;CL:0000187!6.02e-07!54 | |||
|ontology_enrichment_celltype_v019=CL:0000359;9.44e-11;32!CL:0002595;1.64e-09;5!CL:0002579;2.75e-08;3!CL:0000197;3.38e-08;6!CL:0000098;3.38e-08;6!CL:0002167;3.38e-08;6!CL:0000192;1.03e-07;43!CL:0002592;1.47e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,3.18e-11,32;CL:0002595,3.06e-09,5;CL:0002579,2.76e-08,3;CL:0000197,2.89e-08,6;CL:0000098,2.89e-08,6;CL:0002167,2.89e-08,6;CL:0000192,5.75e-08,43;CL:0000514,5.75e-08,43;CL:0002592,8.63e-08,3;CL:0002568,8.81e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000514;1.03e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!8.96e-10!79;UBERON:0007798!8.96e-10!79;UBERON:0001637!1.68e-08!42;UBERON:0003509!1.68e-08!42;UBERON:0004572!1.68e-08!42;UBERON:0004573!3.91e-08!33;UBERON:0004571!3.91e-08!33;UBERON:0000055!5.56e-08!69;UBERON:0002385!7.16e-08!63;UBERON:0001015!7.16e-08!63;UBERON:0000383!7.16e-08!63;UBERON:0001009!1.22e-07!113;UBERON:0001981!2.33e-07!60;UBERON:0007500!2.33e-07!60;UBERON:0004537!2.33e-07!60;UBERON:0006965!2.33e-07!60;UBERON:0004872!3.48e-07!84;UBERON:0001134!3.55e-07!61;UBERON:0002036!3.55e-07!61;UBERON:0003082!3.55e-07!61;UBERON:0004535!4.15e-07!110;UBERON:0007023!5.17e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0003834;1.64e-09;5!UBERON:0001533;1.64e-09;5!UBERON:0001637;7.64e-09;42!UBERON:0003509;7.64e-09;42!UBERON:0004572;7.64e-09;42!UBERON:0004573;8.55e-09;33!UBERON:0004571;8.55e-09;33!UBERON:0003688;9.83e-09;6!UBERON:0002358;9.83e-09;6!UBERON:0003684;9.83e-09;6!UBERON:0001178;9.83e-09;6!UBERON:0003498;1.47e-07;3!UBERON:0005985;1.47e-07;3!UBERON:0001621;1.47e-07;3!UBERON:0006947;1.47e-07;3!UBERON:0004054;1.47e-07;3!UBERON:0003513;6.45e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004573,8.45e-11,33;UBERON:0004571,8.45e-11,33;UBERON:0001637,4.93e-10,42;UBERON:0003509,4.93e-10,42;UBERON:0004572,4.93e-10,42;UBERON:0002049,1.16e-09,78;UBERON:0007798,1.16e-09,78;UBERON:0003498,1.56e-09,5;UBERON:0005985,1.56e-09,5;UBERON:0003834,3.06e-09,5;UBERON:0001533,3.06e-09,5;UBERON:0003688,9.75e-09,6;UBERON:0002358,9.75e-09,6;UBERON:0003684,9.75e-09,6;UBERON:0001178,9.75e-09,6;UBERON:0000055,3.57e-08,68;UBERON:0003104,3.64e-08,160;UBERON:0009142,3.64e-08,160;UBERON:0007500,3.79e-08,59;UBERON:0001981,3.79e-08,59;UBERON:0004537,3.79e-08,59;UBERON:0006965,3.79e-08,59;UBERON:0001621,8.63e-08,3;UBERON:0004145,1.38e-07,3;UBERON:0006947,1.48e-07,3;UBERON:0004054,1.48e-07,3;UBERON:0003513,9.96e-07,7 | |||
|phase1_expression=1.45342703416445,0.214100523890983,2.25527046553554,0,0.446961094427288,0.872338524100369,0,0,0,0.245733936501509,0,0.218441372130172,0,0,0,0,0,0,0,0.246242116153576,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,3.2529523714611,0.50133791063589,0.434539556882471,0,0,0.0945348171640679,0,0.175669571386252,0.0654895377488563,0.728590576585084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,1.42306505074684,0,0.402829317109147,0,0,0,0,0.17859945656816,0,0,0,0,0,0,0,0,1.49091585508596,0.633152558322899,0.132409180813219,0.573673241497627,0.354668382198357,0,0,0.24666754841716,0.311211035399766,0.134710672069688,0.163461903113459,1.96764655938411,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0.150238058906597,1.02088964844019,0,0.85422955527427,0.211931901159562,0,0,0,0.930584281657949,0,0,0,0.460249493211497,0,0.355009592516614,0,0.339121184620975,0.966304265816484,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0.196221465125346,0,0,0,0.4115740113314,0,0,0,2.36315962672562,0,0,0,0.658501712451753,0,0,0.0925884451585296,0.325808305310325,0,0,0,0,0.577465791044295,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0.43596006883328,0.1466765716419,2.97324946242889,0,0,1.59562869950922,0,0.257207374262142,0,0,0.285955987316295,0,0,0,0,0,0,0,0.399891964728228,0,0,0,1.91699884393266,0,0,0.144781306667579,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66376689224646,0.892144943985809,2.05013139544115,1.52283839490527,0.601892199455438,0,0,0,0,0,1.37060810223918,0,0,0,0,0,0,0,0.496215615637554,0.306923946576125,0,7.04765320906355,4.09365799253363,0.482561763430822,0,0,0,0.0821271560138091,0.519254429183621,0,0,0,0,0,0,0,0,0.231046011313244,0,0,0.527758144464379,0,0,0,0,0,0,1.27438136522519,0,0,0,0,0,0.656029291399411,0,0.103041011647722,0,0.247528499761764,0,0,0,0,0,0.15350367472613,0,0.107420244868274,0,0.0852266274161009,0.0890320356467374,0.661139661443912,0.192190067365106,0,0,0,0.31481234683064,0,0,1.59691809095107,1.73986598415015,1.66791797193528,0.143124886741991,0,2.21465597303108,0.190630193923825,0,0,0.636406495851874,0,0.359744915166629,0,0,1.81964233415984,1.58510321173008,0.421258456238981,0,0.487426979262569,1.05650146756755,0.136499911407986,0,0,0.551365343546124,1.32687795048244,1.31535265576129,0,0,0.405820753925408,0.30982349809975,0,0,0,0.35667105148125,0.354761064070598,0,0.329294892959902,0,0,0.192444225451024,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324621940274555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0.140669416410513,0,0,0,1.79323189425963,0,0,0.102268682502155,0,2.17727711363265,0,0,0,1.08507746200627,0,1.11136990144637,0,0.185536196323703,0,0,0,0,0,0,0.472775363535873,0,0,0,0,0,0,0,0,0,0,0,0.769502585037971,0,0,0,0.108647371922008,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.619202951523374,0,0,0,0,0.134802265961354,0,0,0,0,0,1.18375320854817,0,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0.52418000472609,0,0,0,0,0.484945082442097,0,0,0.137041924646751,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0.104602846312333,0.203996435272644,0,0,0,0,0.429765441419957,0,0,0.916641696046735,2.15361907373044,0,0.429226048136571,0.223171457441873,0.0671834724867263,1.44119953416961,0,0,0,0,0.0984274815147488,0,0,0.136203406111576,0,0,0,0,0,0,0,1.02447419488958,0.104909176269996,0,0,0,0,0,0,0.542999601753713,0.864221491201268,0,0,0,0.511164065356265,0,0.146552233678082,0,0,0,0,0,0.427149650270779,0,0.414239055347196,0.496166021811951,0,0,0,0,0.2506898940227,0,0,0,0,0,0.1251909307065,0.573409195690071,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0.251567901752575,0,0.228840068396924,0,0,0,0,0,0,0.414706207840855,0.265841714557995,0.521745061811734,0.300515217994437,0,0,0,0.107410557042488,0.928067519756987,0.796191777397232,0,0,0,1.26184898228651,0.192619830407303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0.6124909547064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0.206686796501184,0,0,0,1.48863353516788,0,0.255524855279191,0.535701835878287,0.672567444437648,0,0,0,0,0,0,0,0,0,0.313972371402056,0.157115589916002,0,0.913158720509496,0,2.38875843943525,0.571812353413251,0,0,0,0,0,0,0,0,0,0,1.69354820076372,0,0,0,0.111855431797792,0,0,0.647428837187895,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0.245148321753905,0,0,0.594092800654172,0.4226557275834,0,0.375935671919414,0.193373663920732,0,0,0,0,0,0,0.143339583151451,0,0.135982980381829,0.436350690340377,0,0,0,0.432626562123789,0,0,0,0,0,0,0,0.530450887527676,0,0.829169439458779,0.20686599172379,0,0,0,0,0,0.572824424503484,0.404234377916439,0.217716747896961,0,0,0.78894425931944,0,0,0,0,0.179650404213174,0,0.122241444182866,0.406896178315738,0,0,0 | |||
|short_description=p@chr4:57897281..57897294,- | |||
}} |
Revision as of 01:11, 22 January 2014
Short description: | p@chr4:57897281..57897294, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:57897281..57897294, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 3.18e-11 | 32 |
smooth muscle cell of the subclavian artery | 3.06e-09 | 5 |
omentum preadipocyte | 2.76e-08 | 3 |
receptor cell | 2.89e-08 | 6 |
sensory epithelial cell | 2.89e-08 | 6 |
olfactory epithelial cell | 2.89e-08 | 6 |
smooth muscle cell | 5.75e-08 | 43 |
smooth muscle myoblast | 5.75e-08 | 43 |
smooth muscle cell of the coronary artery | 8.63e-08 | 3 |
mesenchymal stem cell of Wharton's jelly | 8.81e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
systemic artery | 8.45e-11 | 33 |
systemic arterial system | 8.45e-11 | 33 |
artery | 4.93e-10 | 42 |
arterial blood vessel | 4.93e-10 | 42 |
arterial system | 4.93e-10 | 42 |
vasculature | 1.16e-09 | 78 |
vascular system | 1.16e-09 | 78 |
heart blood vessel | 1.56e-09 | 5 |
coronary vessel | 1.56e-09 | 5 |
thoracic segment blood vessel | 3.06e-09 | 5 |
subclavian artery | 3.06e-09 | 5 |
omentum | 9.75e-09 | 6 |
peritoneum | 9.75e-09 | 6 |
abdominal cavity | 9.75e-09 | 6 |
visceral peritoneum | 9.75e-09 | 6 |
vessel | 3.57e-08 | 68 |
mesenchyme | 3.64e-08 | 160 |
entire embryonic mesenchyme | 3.64e-08 | 160 |
epithelial tube open at both ends | 3.79e-08 | 59 |
blood vessel | 3.79e-08 | 59 |
blood vasculature | 3.79e-08 | 59 |
vascular cord | 3.79e-08 | 59 |
coronary artery | 8.63e-08 | 3 |
outflow tract | 1.38e-07 | 3 |
male genital duct | 1.48e-07 | 3 |
internal male genitalia | 1.48e-07 | 3 |
trunk blood vessel | 9.96e-07 | 7 |