FFCP PHASE1:Hg19::chr4:71063751..71063766,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54959 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26043 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-72bp_to_ENST00000510847_5end | |||
|coexpression_cluster_id=C37 | |||
|description=CAGE_peak_4_at_ODAM_5end | |||
|id=chr4:71063751..71063766,+ | |||
|ontology_enrichment_celltype=CL:0002537!5.90e-08!5 | |||
|ontology_enrichment_celltype_v019=CL:0002537;7.27e-10;5!CL:0000182;4.63e-09;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002537,6.80e-10,5;CL:0000182,4.70e-09,12 | |||
|ontology_enrichment_development_v019=UBERON:0006298;7.88e-13;1!UBERON:0000358;2.20e-12;1!UBERON:0008801;3.64e-12;1!UBERON:0004161;7.74e-10;11!UBERON:0009497;2.11e-08;13!UBERON:0006965;6.99e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!1.09e-12!14;UBERON:0000158!1.09e-12!14;UBERON:0000478!1.89e-11!24;UBERON:0001829!2.49e-09!2;UBERON:0000077!3.90e-09!130;UBERON:0004119!4.13e-09!169;UBERON:0000925!4.13e-09!169;UBERON:0006595!4.13e-09!169;UBERON:0003127!4.72e-09!2;UBERON:0001987!6.43e-09!4;UBERON:0004340!6.43e-09!4;UBERON:0003124!1.07e-08!7;UBERON:0004921!3.46e-08!129;UBERON:0004185!3.46e-08!129;UBERON:0001007!1.12e-07!155;UBERON:0001555!1.12e-07!155;UBERON:0007026!1.12e-07!155;UBERON:0000078!1.75e-07!18;UBERON:0001044!7.89e-07!6;UBERON:0003293!7.89e-07!6;UBERON:0003294!7.89e-07!6;UBERON:0010047!7.89e-07!6;UBERON:0000167!7.89e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0001829;3.30e-23;2!UBERON:0001044;1.75e-17;6!UBERON:0003293;1.75e-17;6!UBERON:0003294;1.75e-17;6!UBERON:0010047;1.75e-17;6!UBERON:0003408;1.75e-17;6!UBERON:0000167;1.75e-17;6!UBERON:0001723;2.21e-15;3!UBERON:0001033;2.21e-15;3!UBERON:0001041;5.43e-13;14!UBERON:0001736;7.88e-13;1!UBERON:0001831;3.64e-12;1!UBERON:0001567;3.64e-12;1!UBERON:0002365;5.22e-12;31!UBERON:0002330;5.22e-12;31!UBERON:0000165;8.07e-10;28!UBERON:0000305;2.73e-07;7!UBERON:0003127;5.11e-07;2!UBERON:0000341;6.99e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001829,3.91e-23,2;UBERON:0001044,1.90e-17,6;UBERON:0003293,1.90e-17,6;UBERON:0003294,1.90e-17,6;UBERON:0010047,1.90e-17,6;UBERON:0000167,1.90e-17,6;UBERON:0001723,2.38e-15,3;UBERON:0001033,2.38e-15,3;UBERON:0010056,2.38e-15,3;UBERON:0001736,7.89e-13,1;UBERON:0006298,7.89e-13,1;UBERON:0002365,1.04e-12,31;UBERON:0002330,1.04e-12,31;UBERON:0000166,1.71e-12,22;UBERON:0001831,4.31e-12,1;UBERON:0001567,4.31e-12,1;UBERON:0008801,4.31e-12,1;UBERON:0001041,1.88e-11,87;UBERON:0003408,1.05e-10,10;UBERON:0000161,1.10e-10,36;UBERON:0004921,9.00e-10,118;UBERON:0000165,1.86e-09,29;UBERON:0000930,1.86e-09,29;UBERON:0002530,1.13e-08,59;UBERON:0001007,1.13e-07,145;UBERON:0001555,1.13e-07,145;UBERON:0007026,1.13e-07,145;UBERON:0000305,2.60e-07,7;UBERON:0003127,5.11e-07,2;UBERON:0000341,6.80e-07,2;UBERON:0004119,8.22e-07,160;UBERON:0000925,8.22e-07,160;UBERON:0006595,8.22e-07,160 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464775771478074,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0.983907508344908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335964256397719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,2.41718899183244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.95497793895076,6.83018765915069,2.45728561679386,0,0,0,0,0,3.58646378851925,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.46112780877612,0.0897576444097721,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0.989471500037586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0.698906672968121,0,0,0,0.0821154570532092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.599037001496973,0,0,0,0,0,8.82371641840905,6.01635766182515,7.61660045552289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.643324774124777,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261906694481422,0,0,0,0,0,0.0634158101939068,0,1.09651553371436,0,0,0,0,0,0,0,0.177404740325278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.97610423125813,0,0,0,0,0,17.6393217116314,0,0,0,0.22910686854405,0,0,0,1.27595303699816,0,0,0,0,0,0,0.596852325484105,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.3856906519226,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0,0,0,3.83821167421766,0,0,0,0,0.827413057616144,0.404234377916439,1.30630048738177,1.02669990325584,0.134704106029175,10.1128309603674,0.332660356546013,0,0,0,0,2.34640942403454,0,0,0,0,0 | |||
|short_description=p4@ODAM | |||
}} |
Revision as of 01:21, 22 January 2014
Short description: | p4@ODAM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ODAM_5end |
Coexpression cluster: | C37_salivary_submaxillary_parotid_seminal_tongue_ductus_trachea |
Association with transcript: | -72bp_to_ENST00000510847_5end |
EntrezGene: | ODAM |
HGNC: | 26043 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amnion mesenchymal stem cell | 6.80e-10 | 5 |
hepatocyte | 4.70e-09 | 12 |
Ontology term | p-value | n |
---|---|---|
major salivary gland | 3.91e-23 | 2 |
saliva-secreting gland | 1.90e-17 | 6 |
gland of oral region | 1.90e-17 | 6 |
gland of foregut | 1.90e-17 | 6 |
oral gland | 1.90e-17 | 6 |
oral cavity | 1.90e-17 | 6 |
tongue | 2.38e-15 | 3 |
gustatory system | 2.38e-15 | 3 |
future tongue | 2.38e-15 | 3 |
submandibular gland | 7.89e-13 | 1 |
submandibular gland primordium | 7.89e-13 | 1 |
exocrine gland | 1.04e-12 | 31 |
exocrine system | 1.04e-12 | 31 |
oral opening | 1.71e-12 | 22 |
parotid gland | 4.31e-12 | 1 |
cheek | 4.31e-12 | 1 |
parotid gland primordium | 4.31e-12 | 1 |
foregut | 1.88e-11 | 87 |
gland of gut | 1.05e-10 | 10 |
orifice | 1.10e-10 | 36 |
subdivision of digestive tract | 9.00e-10 | 118 |
mouth | 1.86e-09 | 29 |
stomodeum | 1.86e-09 | 29 |
gland | 1.13e-08 | 59 |
digestive system | 1.13e-07 | 145 |
digestive tract | 1.13e-07 | 145 |
primitive gut | 1.13e-07 | 145 |
amnion | 2.60e-07 | 7 |
open tracheal system trachea | 5.11e-07 | 2 |
throat | 6.80e-07 | 2 |
endoderm-derived structure | 8.22e-07 | 160 |
endoderm | 8.22e-07 | 160 |
presumptive endoderm | 8.22e-07 | 160 |