FFCP PHASE1:Hg19::chr4:132300946..132300963,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=weak | |||
|UniProt= | |||
|association_with_transcript=-204bp_to_ENST00000500169_5end | |||
|description=CAGE_peak_2_at_ENST00000500169_5end | |||
|id=chr4:132300946..132300963,+ | |||
|ontology_enrichment_celltype=CL:0002092!7.25e-11!10;CL:0000062!2.13e-10!11;CL:0000375!2.13e-10!11;CL:0000335!2.13e-10!11;CL:0002564!7.82e-10!3;CL:0002540!2.69e-08!6;CL:0000054!7.26e-08!2;CL:0000137!7.26e-08!2;CL:0000092!7.26e-08!2 | |||
|ontology_enrichment_celltype_v019=CL:0000319;5.07e-10;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000319,4.44e-10,1;CL:0000062,1.37e-07,11;CL:0000375,1.37e-07,11;CL:0000335,1.37e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000335;1.25e-07;11 | |||
|ontology_enrichment_disease=DOID:8692!7.58e-18!31;DOID:1240!1.36e-15!39;DOID:1036!7.14e-15!8;DOID:0050686!1.02e-14!137;DOID:2531!1.13e-14!51;DOID:0060083!1.13e-14!51;DOID:162!2.06e-14!235;DOID:14566!6.65e-14!239;DOID:305!1.84e-08!106;DOID:200!7.26e-08!2;DOID:4305!7.26e-08!2 | |||
|ontology_enrichment_disease_v019=DOID:0060085;1.98e-10;1!DOID:3165;1.98e-10;1!DOID:0060121;1.98e-10;1!DOID:2438;1.98e-10;1!DOID:4418;1.98e-10;1!DOID:1749;3.65e-10;14!DOID:3030;5.07e-10;1!DOID:3908;6.42e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:0060085,2.16e-10,1;DOID:3165,2.16e-10,1;DOID:0060121,2.16e-10,1;DOID:2438,2.16e-10,1;DOID:4418,2.16e-10,1;DOID:1749,3.65e-10,14;DOID:3030,4.44e-10,1;DOID:162,5.73e-09,235;DOID:14566,1.02e-08,239;DOID:305,3.87e-08,106;DOID:3908,6.31e-08,5;DOID:8692,5.19e-07,31 | |||
|ontology_enrichment_uberon=UBERON:0002242!7.82e-10!3;UBERON:0003068!7.82e-10!3;UBERON:0002328!7.82e-10!3;UBERON:0004880!7.82e-10!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001282;3.71e-10;1!UBERON:0009842;3.71e-10;1!UBERON:0003704;3.71e-10;1!UBERON:0001171;3.71e-10;1!UBERON:0001172;3.71e-10;1!UBERON:0007195;8.61e-10;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001282,4.06e-10,1;UBERON:0009842,4.06e-10,1;UBERON:0003704,4.06e-10,1;UBERON:0001171,4.06e-10,1;UBERON:0001172,4.06e-10,1;UBERON:0007195,1.17e-09,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257207374262142,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0.500170521059677,0.271265023699736,0,0,0,0,0.300946099727719,0,0,1.32845119707087,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19040304263846,0.495056999523528,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.6557641036396,0,0,0,0,0,0.191505370132367,0,0,0,1.82587743226554,0,0,0,0.321176150207399,0,0,5.49608551609224,0,0.671028323677248,0.500547425135725,0,0.278406173895242,0,2.70455678475983,0,0,0,0,1.57768678274367,0.334330152832435,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11136990144637,0,0,0,0.260427761085233,0,0,0,3.55955110409873,0,0,0,0,0,0,0,0,0,0,0,0,0,3.19037756371603,0,0,0,0,0,0,0,0.627921025580099,0,0.451191321234361,0,0.335643173951685,6.64138064534648,6.19852658023477,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.16015296279268,0,0,7.6150879238957,0,1.19885765749278,0,0,0,0,0.621262677827163,0,0,0,0,1.73370353940911,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21760706690754,0,0,0,0,0,0,0,0,0,0.985110248992068,0,0,0,0,0,0,0.171086837884329,0,0,0,0,0,4.54506753365272,0,3.19170628885091,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0.285465333544967,0,0,0,0,0,0,0.189403005275089,0.251567901752575,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.94927490504463,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.12345502025933,0,0,0.381382095467167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.62041277132864,0.955538938977433,0,0.098150233615243,0,0,0,0,0,0,0,0.594600453887843,0,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,1.41157948686277,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.909344378618873,0.803892390468535,0,0,0,0,0,0,4.37314264064392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@ENST00000500169 | |||
}} |
Revision as of 03:05, 22 January 2014
Short description: | p2@ENST00000500169 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ENST00000500169_5end |
Coexpression cluster: | NA |
Association with transcript: | -204bp_to_ENST00000500169_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mucus secreting cell | 4.44e-10 | 1 |
osteoblast | 1.37e-07 | 11 |
osteoprogenitor cell | 1.37e-07 | 11 |
mesenchyme condensation cell | 1.37e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
intralobular bile duct | 4.06e-10 | 1 |
acinus | 4.06e-10 | 1 |
intrahepatic bile duct | 4.06e-10 | 1 |
portal lobule | 4.06e-10 | 1 |
hepatic acinus | 4.06e-10 | 1 |
stroma of bone marrow | 1.17e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
organ system benign neoplasm | 2.16e-10 | 1 |
skin benign neoplasm | 2.16e-10 | 1 |
integumentary system benign neoplasm | 2.16e-10 | 1 |
dermis tumor | 2.16e-10 | 1 |
cutaneous fibrous histiocytoma | 2.16e-10 | 1 |
squamous cell carcinoma | 3.65e-10 | 14 |
mucinous adenocarcinoma | 4.44e-10 | 1 |
cancer | 5.73e-09 | 235 |
disease of cellular proliferation | 1.02e-08 | 239 |
carcinoma | 3.87e-08 | 106 |
non-small cell lung carcinoma | 6.31e-08 | 5 |
myeloid leukemia | 5.19e-07 | 31 |