FFCP PHASE1:Hg19::chr4:140650307..140650311,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C15 | |||
|description=CAGE_peak_at_chr4:140650307..140650311,- | |||
|id=chr4:140650307..140650311,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000746;1.40e-14;3!CL:0000737;2.80e-11;4!CL:0002188;3.22e-09;5!CL:1000746;6.04e-07;7!CL:1000612;6.04e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000746,1.40e-14,3;CL:0000513,1.40e-14,3;CL:0000737,2.80e-11,4;CL:0002188,2.97e-09,5;CL:1000746,5.70e-07,7;CL:1000612,5.70e-07,7 | |||
|ontology_enrichment_development_v019=CL:0000513;1.40e-14;3!UBERON:0007123;3.22e-09;5 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002046;3.22e-09;5!UBERON:0000074;6.04e-07;7!UBERON:0001229;6.04e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002046,3.49e-09,5;UBERON:0004117,3.49e-09,5;UBERON:0007689,3.49e-09,5;UBERON:0007123,3.49e-09,5;UBERON:0003091,3.49e-09,5;UBERON:0010532,5.70e-07,7;UBERON:0000074,5.70e-07,7;UBERON:0001229,5.70e-07,7;UBERON:0001230,5.70e-07,7;UBERON:0003220,5.70e-07,7;UBERON:0005749,5.70e-07,7;UBERON:0004199,5.70e-07,7;UBERON:0004209,5.70e-07,7;UBERON:0004198,5.70e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0,0,0,0,0,0,0.587200878669695,0,0,0.217010870715852,0,0.32389366601898,0,0.145398238779565,0,0.242584061187816,0.232429036905685,0,0,0,0,0.236482229888585,0.689491361473237,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0.209658645508376,0,0,0,0.570025487482497,0.19891667719909,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,2.43806866313962,0,0,0,0,0,0,0,0,0,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13733384070897,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0.79312517629427,0,0,0,0,0,0.0711418433484141,0,0,0,0.635020748171649,0,0.280797178113459,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0,0,0,0,0,0.307160702099232,0,0,0,0,5.27813520319984,0,0.552567831062295,0.503865495708552,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0874599999961957,0,0,0,0,0.344743373241465,0,0.173624994933292,0,0,0,0.442317039724898,0.295547618953547,0,0,0,0.307801034015188,0,0,0.0897576444097721,0,0,0,0,1.02193298195737,0,0.166211681900156,0,0,0,0,0,0,0,0,0,0.995261931078505,0.0884575645033392,0.611030144933625,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0.30607276163049,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0.144090417154106,0,0.343189995723929,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0.262887354279314,0,0,0,0.399358000997982,0,0,0.0671834724867263,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0.104909176269996,0.105600336519406,0.35857467866569,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0.171086837884329,0.704815022316672,0.106787412567695,0,0,0,0,0,0,0,0,0,0.327872630709804,0,0,0,0,0,0.332787154610557,0,0,0,0,0,0,0.468334905806882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0.127894371303652,0.215649622793364,0.157265941855896,0,0,0,0.495743057036009,0,0,0,0,0,0,0,0,0,0,0.252071696221718,0.0691572524642179,0.161475645631851,0,0,0,0.183428598521679,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313972371402056,0,0,0.913158720509496,0,0,0.285906176706625,0,0.116241425368125,0,0,0,0,0,0,0.118332000730565,0,0.423387050190929,0,0,0,0,0.098150233615243,0,0,0,0,0,0,0,0,0.11294608203896,0.219881033490858,0.150962843566674,0,0.218559560503957,0,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0.0802413666891683,0,0.458729283404541,0,0,0,0,0,0,0,0,0.126166424835079,0,0,0,0,0,0.250707539292375,0,0,0,0,0,0.23806443146374,0,0.124149428591716,0,0.0636471582781649,1.0105859447911,0,0,0.134704106029175,0,0.332660356546013,0,0,0,0,0,0.244482888365733,0.813792356631477,0,0,0 | |||
|short_description=p@chr4:140650307..140650311,- | |||
}} |
Revision as of 03:12, 22 January 2014
Short description: | p@chr4:140650307..140650311, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:140650307..140650311, - |
Coexpression cluster: | C15_anaplastic_small_skeletal_neuroblastoma_parietal_temporal_tongue |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiac muscle cell | 1.40e-14 | 3 |
cardiac muscle myoblast | 1.40e-14 | 3 |
striated muscle cell | 2.80e-11 | 4 |
glomerular endothelial cell | 2.97e-09 | 5 |
glomerular cell | 5.70e-07 | 7 |
kidney corpuscule cell | 5.70e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
thyroid gland | 3.49e-09 | 5 |
pharyngeal pouch | 3.49e-09 | 5 |
thyroid diverticulum | 3.49e-09 | 5 |
pharyngeal pouch 2 | 3.49e-09 | 5 |
thyroid primordium | 3.49e-09 | 5 |
primitive nephron | 5.70e-07 | 7 |
renal glomerulus | 5.70e-07 | 7 |
renal corpuscle | 5.70e-07 | 7 |
glomerular capsule | 5.70e-07 | 7 |
metanephric mesenchyme | 5.70e-07 | 7 |
glomerular tuft | 5.70e-07 | 7 |
S-shaped body | 5.70e-07 | 7 |
renal vesicle | 5.70e-07 | 7 |
comma-shaped body | 5.70e-07 | 7 |