FFCP PHASE1:Hg19::chr4:177809169..177809181,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr4:177809169..177809181,+ | |||
|id=chr4:177809169..177809181,+ | |||
|ontology_enrichment_celltype=CL:0002573!1.71e-30!2;CL:1001319!5.13e-23!1;CL:1000600!5.13e-23!1;CL:0000054!2.32e-12!2;CL:0000137!2.32e-12!2;CL:0000092!2.32e-12!2;CL:0000083!6.50e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0002573;3.96e-66;2!CL:0000083;8.82e-14;4!CL:0000243;1.06e-12;15!CL:0000125;1.06e-12;15!CL:0000095;1.77e-11;17!CL:0002319;2.18e-08;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002573,4.68e-66,2;CL:0000083,8.82e-14,4;CL:0000243,1.09e-12,15;CL:0000125,1.09e-12,15;CL:0000030,1.09e-12,15;CL:0000339,1.09e-12,15;CL:0000095,1.81e-11,17;CL:0000123,1.81e-11,17;CL:0002319,2.22e-08,25 | |||
|ontology_enrichment_development_v019=CL:0000339;1.06e-12;15 | |||
|ontology_enrichment_disease=DOID:0060085!2.62e-23!1;DOID:3165!2.62e-23!1;DOID:0060121!2.62e-23!1;DOID:2438!2.62e-23!1;DOID:4418!2.62e-23!1;DOID:5662!4.10e-23!1;DOID:4074!1.48e-12!2;DOID:4905!1.48e-12!2;DOID:3498!1.48e-12!2;DOID:200!2.32e-12!2;DOID:4305!2.32e-12!2;DOID:4556!9.66e-09!3;DOID:1793!6.50e-07!4;DOID:0060072!8.14e-07!4 | |||
|ontology_enrichment_disease_v019=DOID:4074;4.32e-26;2!DOID:4905;4.32e-26;2!DOID:3498;4.32e-26;2!DOID:4556;1.03e-17;3!DOID:1793;8.82e-14;4!DOID:3908;3.42e-11;5!DOID:170;1.22e-09;6!DOID:3905;8.61e-07;9 | |||
|ontology_enrichment_disease_v019_2=DOID:4074,4.32e-26,2;DOID:4905,4.32e-26,2;DOID:3498,4.32e-26,2;DOID:4556,9.46e-18,3;DOID:1793,8.82e-14,4;DOID:3908,3.26e-11,5;DOID:170,1.22e-09,6;DOID:3905,8.37e-07,9 | |||
|ontology_enrichment_uberon=UBERON:0004645!5.13e-23!1;UBERON:0001256!5.13e-23!1;UBERON:0001259!5.13e-23!1;UBERON:0001255!3.24e-12!2;UBERON:0001556!3.24e-12!2;UBERON:0000010!7.22e-11!8;UBERON:0000014!8.14e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0000010;6.07e-23;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000010,6.41e-23,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.25453290415915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.596143835108969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.9632158164121,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342976018874837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.85161202995318,5.36844449982693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325613074443898,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr4:177809169..177809181,+ | |||
}} |
Revision as of 04:07, 22 January 2014
Short description: | p@chr4:177809169..177809181, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:177809169..177809181, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Schwann cell | 4.68e-66 | 2 |
epithelial cell of pancreas | 8.82e-14 | 4 |
glial cell (sensu Vertebrata) | 1.09e-12 | 15 |
glial cell | 1.09e-12 | 15 |
glioblast | 1.09e-12 | 15 |
glioblast (sensu Vertebrata) | 1.09e-12 | 15 |
neuron associated cell | 1.81e-11 | 17 |
neuron associated cell (sensu Vertebrata) | 1.81e-11 | 17 |
neural cell | 2.22e-08 | 25 |
Ontology term | p-value | n |
---|---|---|
peripheral nervous system | 6.41e-23 | 8 |
Ontology term | p-value | n |
---|---|---|
pancreas adenocarcinoma | 4.32e-26 | 2 |
pancreatic carcinoma | 4.32e-26 | 2 |
pancreatic ductal adenocarcinoma | 4.32e-26 | 2 |
lung large cell carcinoma | 9.46e-18 | 3 |
pancreatic cancer | 8.82e-14 | 4 |
non-small cell lung carcinoma | 3.26e-11 | 5 |
endocrine gland cancer | 1.22e-09 | 6 |
lung carcinoma | 8.37e-07 | 9 |