FFCP PHASE1:Hg19::chr5:82824439..82824445,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr5:82824439..82824445,+ | |||
|id=chr5:82824439..82824445,+ | |||
|ontology_enrichment_celltype=CL:0002057!3.15e-09!42;CL:0000860!4.09e-08!45 | |||
|ontology_enrichment_celltype_v019=CL:0000313;7.95e-10;1!CL:0002570;1.62e-09;8!CL:1000306;6.72e-09;4!CL:0002547;6.72e-09;4!CL:0000576;1.76e-07;48!CL:0000860;2.33e-07;33!CL:0002057;2.33e-07;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.81e-11,42;CL:0002057,2.81e-11,42;CL:0000313,7.98e-10,1;CL:0000473,9.82e-10,48;CL:0000234,9.82e-10,48;CL:0002570,2.08e-09,8;CL:1000306,3.68e-09,4;CL:0002547,3.68e-09,4;CL:0002194,1.42e-07,59;CL:0000576,1.42e-07,59;CL:0000040,1.42e-07,59;CL:0000559,1.42e-07,59;CL:0002009,2.71e-07,61 | |||
|ontology_enrichment_development_v019=CL:0002057;1.53e-07;42 | |||
|ontology_enrichment_disease=DOID:2394!1.17e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:2152;7.95e-10;1!DOID:2394;1.96e-09;14!DOID:4235;2.65e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,7.98e-10,1;DOID:2394,2.48e-09,14;DOID:4235,3.25e-09,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0004911;7.95e-10;1!UBERON:0004797;6.72e-09;4!UBERON:0000415;6.72e-09;4!UBERON:0007240;6.72e-09;4!UBERON:0005742;6.72e-09;4!UBERON:0005734;6.72e-09;4!UBERON:0004664;6.72e-09;4!UBERON:0004663;6.72e-09;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004911,7.98e-10,1;UBERON:0000415,3.68e-09,4;UBERON:0007240,3.68e-09,4;UBERON:0005742,3.68e-09,4;UBERON:0005734,3.68e-09,4;UBERON:0004664,3.68e-09,4;UBERON:0004663,3.68e-09,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0.547497700291537,0.251085279189606,0,0,0,0.393364276848904,0,0,0,0,0,0,0,0,0,3.20871115952227,1.51907609501096,0,0,0,0.726991193897824,0.377875943688809,0,0.464858073811369,0.411167888021826,0,0.863077176966451,0.768482119587302,0.236482229888585,0,0,0,0.564727018627814,0,0.224723484445085,1.22433556948361,0,0,0,0.199463657621632,0,1.45104619314292,0.56738522469114,0,0.502497330513487,1.0429658368404,0.217188844705117,0,0,0,0.633765858935825,0,0.209658645508376,1.68492946719743,2.25265339262259,1.28580469357664,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0,0.87834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0.379891534993739,1.45650098894541,1.72101972449288,0.709336764396714,0,0,0.49333509683432,0.311211035399766,0.269421344139376,0.163461903113459,0,0,0,0,0,0,0.117434498643765,0,0,0,0.122834317311768,0,0,0,0,0,0.168336113954066,0.125118519871964,0,0,0,0,0,0.358779271377724,0.640672166455702,0,0,0.103052529238439,0.257640540045629,0,0,0.0974370051611986,0,0.368199594569197,0,0.355009592516614,0,0,0,0,0,0.243947412259191,0.132529768321485,0.116193942869518,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0.335032530668698,0,0,0,0,0,0,0,0.207970861530807,0,0.157702415033935,0.234282829985426,0,0,0,0,0,0.0868836144680828,0,0,0.620304078368662,0.647142602455851,0.74709290462411,0,0,0,0,1.2276957863045,0.561320188866147,0,0,0.321707842287215,0,0.308419387605311,0.177561725313127,0.0821271560138091,0,0.116210378459959,0.241718899183244,0,0.184161977871793,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0.328014645699706,0,0.103041011647722,0,0,0,0,0,0,0,0.15350367472613,0,0.537101224341368,0.290033387828457,0.0852266274161009,0.445160178233687,0,0,0.255225424989168,0,0,1.25924938732256,0,0,0,0.869932992075073,0,0,0.372158369359667,0.316379424718726,0,0,0,0,0,0.359744915166629,0,0.589062011728432,0,0,0,0,0.243713489631284,0,0,0.141405431953713,0,0,0,0,0,0,0,0.30982349809975,0.281695602532241,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0,0.540031437238115,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0.1605880751037,0,0.425846237690326,0,0,0.223676107892416,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0.422008249231538,0.222617410045812,0.329607748453519,0,0.19924798825107,0,0,0,0,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0.344743373241465,0,0.520874984799877,0,0,0,0.221158519862449,0.295547618953547,0,0,0,0,0.227884111694002,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0.611030144933625,0,0,0,0.134802265961354,0,0,0,0,0,0,0,0,0.758238955541855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189932387867636,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0.288950589901519,0,0.136905378891993,0,0,0.262887354279314,0.837847203816763,0.458320848023367,0,0,0,0,0.268733889946905,0.720599767084807,0,0,0,0,0,0,0,1.0896272488926,0.160753148465019,0.137539436597234,0.415440338029185,0,0,0,0,0.0788057072991982,0.104909176269996,0,0,0,0.714695326373367,0,0,0,0,0.653174720218818,0,0,0.340776043570843,0,0,0,0.129282956361551,0.13223260174269,0.171086837884329,0,0.106787412567695,0.157204305099666,0,0.992332043623902,0,0,0,0,0,0,0,0,0,0.122026264901963,0.500763722825999,0,0.554645257684261,0,0,0.249960815924213,0,0,0,0,0,1.34329322598187,0.233713309847224,1.10961172300523,0,0,0,0,0.453692771289717,0.621748802331122,0.443565449968902,0.477890301491107,0,0.621051827505038,1.24411862352257,1.06336685823198,0,0.601030435988874,0.761610424337591,0,1.09109195521536,0.322231671127465,0.464033759878494,0.398095888698616,0,1.03018711554838,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168942440653073,1.53744911152768,0,0,0.691292180758654,0,0,0,0,0,0,0,0,0,0,0.736423801007363,0,0,0.127894371303652,0,0,0.54604819096007,0,0,0,0,0,0,0,0,0.3062454773532,0.128458450192919,2.8339315265117,0.798169295285756,0.205116364240755,0,0,0.161475645631851,0,0,0,0,0.115525666150338,0,0,0,0,0,0,0,0.163771917510097,0,0.0675375846183947,0,0.620060389503552,0.19024743058172,0,0,0.496211178389294,0.175871244359621,0,0,0,0,0.227662191351298,0.0887023701626388,0,0.171488009437418,0.0679697329768317,0,0,0,0,0,0,0,0,0.47775168788705,0,0.316027223465453,0,0,0,0.207216164163037,0,0,0,0,0,0,0,0,0,4.25050640831611,0,0.121917924982269,0,0,0,0.485710993059139,0,0,0,0.33883824611688,0.109940516745429,0,0,0.655678681511872,0,0.245148321753905,0,0.196308467114945,0.297046400327086,0,1.18948980281472,0.0939839179798536,0,0,0,0,0,0,0,0.716697915757256,0,0,0,0,0.371995018166751,0,0.432626562123789,0,0.218531143927391,0.253397002022874,0,0.26721740526556,0,0,0,0,0,0.413731983447581,0,0.476128862927481,0,0.0620747142958579,1.00918676322552,0,0.606351566874658,0.217716747896961,0,0,0.143444410785353,0.332660356546013,0,0,0,2.24563005266467,0,0,0.813792356631477,0,0,0 | |||
|short_description=p@chr5:82824439..82824445,+ | |||
}} |
Revision as of 06:17, 22 January 2014
Short description: | p@chr5:82824439..82824445, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:82824439..82824445, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.81e-11 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.81e-11 | 42 |
serous secreting cell | 7.98e-10 | 1 |
defensive cell | 9.82e-10 | 48 |
phagocyte | 9.82e-10 | 48 |
mesenchymal stem cell of adipose | 2.08e-09 | 8 |
fibroblast of tunica adventitia of artery | 3.68e-09 | 4 |
fibroblast of the aortic adventitia | 3.68e-09 | 4 |
monopoietic cell | 1.42e-07 | 59 |
monocyte | 1.42e-07 | 59 |
monoblast | 1.42e-07 | 59 |
promonocyte | 1.42e-07 | 59 |
macrophage dendritic cell progenitor | 2.71e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
epithelium of female gonad | 7.98e-10 | 1 |
artery wall | 3.68e-09 | 4 |
tunica adventitia of artery | 3.68e-09 | 4 |
adventitia | 3.68e-09 | 4 |
tunica adventitia of blood vessel | 3.68e-09 | 4 |
aorta tunica adventitia | 3.68e-09 | 4 |
aorta wall | 3.68e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 7.98e-10 | 1 |
ovarian cancer | 2.48e-09 | 14 |
spindle cell sarcoma | 3.25e-09 | 1 |