FFCP PHASE1:Hg19::chr5:141249185..141249210,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5097 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8655 | |||
|TSSclassifier=strong | |||
|UniProt=F5H3L5 | |||
|association_with_transcript=-31bp_to_ENST00000357517,ENST00000536585,uc011dbf.1_5end | |||
|coexpression_cluster_id=C3813 | |||
|description=CAGE_peak_4_at_PCDH1_5end | |||
|id=chr5:141249185..141249210,- | |||
|ontology_enrichment_celltype=CL:0002076!5.93e-17!43;CL:0000066!2.73e-14!254;CL:0000223!1.97e-11!59;CL:0002251!2.28e-10!21;CL:0000244!5.83e-08!4;CL:0000731!5.83e-08!4;CL:0002159!1.04e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:0000244;1.40e-09;4!CL:0000731;1.40e-09;4!CL:0000575;6.54e-09;2!CL:0002537;3.62e-08;5!CL:0000622;9.57e-08;5!CL:0002159;6.63e-07;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0000244,1.22e-09,4;CL:0000731,1.22e-09,4;CL:0000575,5.05e-09,2;CL:0002537,4.29e-08,5;CL:0000622,5.45e-08,5;CL:0000066,9.67e-08,253;CL:0002159,5.35e-07,14 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000166!1.36e-13!21;UBERON:0004119!3.04e-12!169;UBERON:0000925!3.04e-12!169;UBERON:0006595!3.04e-12!169;UBERON:0000161!1.27e-11!35;UBERON:0001044!1.26e-10!6;UBERON:0003293!1.26e-10!6;UBERON:0003294!1.26e-10!6;UBERON:0010047!1.26e-10!6;UBERON:0000167!1.26e-10!6;UBERON:0000165!1.36e-10!28;UBERON:0000930!1.36e-10!28;UBERON:0001004!1.99e-10!72;UBERON:0003408!1.03e-09!10;UBERON:0000062!1.31e-09!511;UBERON:0000365!5.03e-09!5;UBERON:0001007!9.77e-09!155;UBERON:0001555!9.77e-09!155;UBERON:0007026!9.77e-09!155;UBERON:0000464!1.70e-08!104;UBERON:0000078!2.44e-08!18;UBERON:0000064!6.80e-08!219;UBERON:0004921!1.55e-07!129;UBERON:0004185!1.55e-07!129;UBERON:0005910!2.01e-07!6;UBERON:0000922!3.54e-07!612;UBERON:0000466!8.22e-07!126 | |||
|ontology_enrichment_uberon_v019=UBERON:0001044;9.60e-11;6!UBERON:0003293;9.60e-11;6!UBERON:0003294;9.60e-11;6!UBERON:0010047;9.60e-11;6!UBERON:0003408;9.60e-11;6!UBERON:0000167;9.60e-11;6!UBERON:0001041;1.09e-09;14!UBERON:0004921;9.70e-09;33!UBERON:0002108;8.92e-08;4!UBERON:0000365;9.57e-08;5!UBERON:0005631;9.87e-07;10!UBERON:0000158;9.87e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001044,9.88e-11,6;UBERON:0003293,9.88e-11,6;UBERON:0003294,9.88e-11,6;UBERON:0010047,9.88e-11,6;UBERON:0000167,9.88e-11,6;UBERON:0000166,3.39e-08,22;UBERON:0000365,8.54e-08,5;UBERON:0002108,1.27e-07,4;UBERON:0000161,1.58e-07,36;UBERON:0003102,8.14e-07,99 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0.436882744260345,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.204823675113,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.91436230634034,1.48313777113772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3082821564276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.966304265816484,0.272746120590835,0.573609190778008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,2.52425656439839,2.24803506515239,0.402115889646523,0.185176890317059,0,0,0,0,0,0,0,0,1.58040879591855,0,0,0,0,0.93733833986777,0.16798212819886,0,0.0895585227028483,0.290633938513962,1.91691339582606,0,0,0.207328115540772,0.144119953416961,0.12624243342638,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00253235151642,5.15653538041019,0,0,0,3.15839729035188,1.15523005656622,0,1.46139224653261,0.422206515571503,0,0,0,0,0,0,0.254876273045038,1.66215201785745,0,0,0,0,0,0,0,0,0,0,1.95018073810956,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0.127612712494584,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288666338176536,0.670302275535787,0,0,1.29151611801369,1.68471475667626,6.20802214951346,0.918893600827838,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0,0,0,0,20.2932812027036,1.18785872333055,22.1155705511447,0,0,0,0,0,0,0,0,0,0,0,0.269605053441981,0,0,0.0986434056369336,0,0,0,0.185536196323703,0,0,0,0,0,1.01701460117107,0.472775363535873,0,0,0,0,0,0,0,0,0.219385397153973,0,17.1491205462682,1.30815439456455,0,0,0,0,1.91400695839152,0,0,0,0,0,0,0,0,0,0,0,1.30586246527318,0,0,0.995261931078505,0.707660516026713,0,0,0,0,0,0.802577647298789,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0.138674673013139,0,1.86185555087318,0.0870592065804026,0,0,0,0,0,5.23740689037465,0,0.225980740780532,0,0,0.0633107959558787,2.93327074102205,0,2.77488893161158,0,0.144090417154106,0,0,0,0,2.82832841540154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449947783103001,3.0952078182318,0.0607495566580247,3.35434687599266,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27668251554036,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0.926404341482917,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,1.05656061679314,0,0,0,0,0,1.39879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192687675289379,0,0,0,0,0.138314504928436,0.161475645631851,0,0.785181748008205,0,0,0.231051332300676,0,0,0,0.0752103283492573,0,0,0,0,2.36569737947272,0.0675375846183947,0,0,0.19024743058172,0,1.09651553371436,0.496211178389294,0,0,0,0,0,0,0.266107110487916,0,0,0,0.263091094251396,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414432328326074,1.87790324803345,6.91259661814092,1.29068207646083,0,0,0,0.68732060563215,0,0,0.223710863595585,0.392600934460972,4.14520944939716,0,0,0,5.34282092365053,0,0,0,0,0,0,2.08370226891451,0,0,0,0,0,0,0,0,0,0,0,0,4.58763333230399,0,0.730336388246517,0.458729283404541,0,0,0,0,1.0580536810308,0,0,0,0,0,0,0.101988829741982,0,0,0,0,0,0,0,1.70587185520785,0.23806443146374,0.0645889098360061,0.124149428591716,0,0,0,8.05551967218757,4.10679961302337,6.12903682432747,0.502055437748735,0.332660356546013,0.162806537221949,0,0,0.0898252021065869,0,0.244482888365733,0.406896178315738,0,0.201273793591026,0 | |||
|short_description=p4@PCDH1 | |||
}} |
Revision as of 07:56, 22 January 2014
Short description: | p4@PCDH1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PCDH1_5end |
Coexpression cluster: | C3813_cervical_amniotic_gall_salivary_tongue_tonsil_skin |
Association with transcript: | -31bp_to_ENST00000357517, ENST00000536585, uc011dbf.1_5end |
EntrezGene: | PCDH1 |
HGNC: | 8655 |
UniProt: | F5H3L5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
transitional epithelial cell | 1.22e-09 | 4 |
urothelial cell | 1.22e-09 | 4 |
corneal epithelial cell | 5.05e-09 | 2 |
amnion mesenchymal stem cell | 4.29e-08 | 5 |
acinar cell | 5.45e-08 | 5 |
epithelial cell | 9.67e-08 | 253 |
general ecto-epithelial cell | 5.35e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
saliva-secreting gland | 9.88e-11 | 6 |
gland of oral region | 9.88e-11 | 6 |
gland of foregut | 9.88e-11 | 6 |
oral gland | 9.88e-11 | 6 |
oral cavity | 9.88e-11 | 6 |
oral opening | 3.39e-08 | 22 |
urothelium | 8.54e-08 | 5 |
small intestine | 1.27e-07 | 4 |
orifice | 1.58e-07 | 36 |
surface structure | 8.14e-07 | 99 |