FFCP PHASE1:Hg19::chr5:146263947..146263959,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C515 | |||
|description=CAGE_peak_at_chr5:146263947..146263959,- | |||
|id=chr5:146263947..146263959,- | |||
|ontology_enrichment_celltype=CL:0002076!9.54e-23!43;CL:0002368!5.15e-21!13;CL:0000244!5.23e-19!4;CL:0000731!5.23e-19!4;CL:0000066!5.24e-18!254;CL:0000223!1.17e-17!59;CL:0002166!4.31e-14!3;CL:0002328!9.47e-14!3;CL:0002621!1.34e-13!3;CL:0002159!5.58e-12!13;CL:0000317!3.03e-10!2;CL:1000448!3.03e-10!2;CL:0002308!3.03e-10!2;CL:0002140!3.03e-10!2;CL:0002202!7.11e-08!9;CL:0002632!7.11e-08!9;CL:0002251!5.95e-07!21;CL:0002231!6.74e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000244;7.37e-41;4!CL:0000731;7.37e-41;4!CL:0002166;7.10e-30;3!CL:0002159;6.76e-25;14!CL:0000317;4.70e-21;2!CL:1000448;4.70e-21;2!CL:0002308;4.70e-21;2!CL:0002140;4.70e-21;2!CL:0002368;2.06e-19;13!CL:0002076;1.42e-15;42!CL:0000362;1.60e-10;9!CL:0000622;5.49e-09;5!CL:0002077;6.43e-09;34!CL:0000154;1.25e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000244,7.76e-41,4;CL:0000731,7.76e-41,4;CL:0002166,1.01e-29,3;CL:0002159,7.36e-25,14;CL:0000317,4.70e-21,2;CL:1000448,4.70e-21,2;CL:0002308,4.70e-21,2;CL:0002140,4.70e-21,2;CL:0002368,2.02e-19,13;CL:0002076,4.05e-18,42;CL:0000066,3.85e-13,253;CL:0000223,8.49e-13,58;CL:0000362,1.53e-10,9;CL:0002077,4.99e-10,34;CL:0000622,5.49e-09,5;CL:0000154,1.25e-07,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1749!1.60e-10!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000365!1.45e-22!5;UBERON:0005910!9.18e-19!6;UBERON:0001004!3.38e-17!72;UBERON:0000065!5.83e-15!53;UBERON:0004119!9.57e-15!169;UBERON:0000925!9.57e-15!169;UBERON:0006595!9.57e-15!169;UBERON:0004815!9.47e-14!3;UBERON:0002031!9.47e-14!3;UBERON:0001949!1.34e-13!3;UBERON:0001708!1.10e-10!4;UBERON:0001704!1.10e-10!4;UBERON:0002185!1.98e-10!4;UBERON:0002419!3.03e-10!2;UBERON:0007771!3.03e-10!2;UBERON:0003297!3.03e-10!2;UBERON:0001821!3.03e-10!2;UBERON:0003487!3.03e-10!2;UBERON:0001820!3.03e-10!2;UBERON:0005089!3.03e-10!2;UBERON:0005088!3.03e-10!2;UBERON:0000072!6.75e-09!46;UBERON:0000161!2.14e-08!35;UBERON:0001737!1.69e-07!9;UBERON:0008947!1.95e-07!38;UBERON:0003258!1.95e-07!38;UBERON:0005911!2.04e-07!82;UBERON:0001557!2.53e-07!19;UBERON:0002090!2.95e-07!6;UBERON:0000166!7.77e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0000365;9.02e-33;5!UBERON:0005910;2.26e-27;6!UBERON:0001708;1.37e-22;4!UBERON:0008895;1.37e-22;4!UBERON:0002419;4.70e-21;2!UBERON:0007771;4.70e-21;2!UBERON:0003297;4.70e-21;2!UBERON:0001821;4.70e-21;2!UBERON:0003487;4.70e-21;2!UBERON:0001820;4.70e-21;2!UBERON:0000486;6.48e-21;12!UBERON:0011159;3.30e-18;5!UBERON:0003343;9.42e-11;4!UBERON:0004785;9.42e-11;4!UBERON:0011137;1.38e-08;11!UBERON:0010323;1.38e-08;11!UBERON:0005911;1.14e-07;36!UBERON:0000974;1.86e-07;6!UBERON:0003729;2.53e-07;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,9.40e-33,5;UBERON:0005910,2.34e-27,6;UBERON:0001708,1.78e-22,4;UBERON:0008895,1.78e-22,4;UBERON:0002419,4.70e-21,2;UBERON:0007771,4.70e-21,2;UBERON:0003297,4.70e-21,2;UBERON:0001821,4.70e-21,2;UBERON:0003487,4.70e-21,2;UBERON:0001820,4.70e-21,2;UBERON:0005089,4.70e-21,2;UBERON:0005088,4.70e-21,2;UBERON:0011159,4.07e-18,5;UBERON:0010188,3.33e-15,6;UBERON:0002539,3.33e-15,6;UBERON:0008816,3.33e-15,6;UBERON:0003343,8.53e-11,4;UBERON:0004785,8.53e-11,4;UBERON:0008814,6.57e-09,18;UBERON:0010323,1.51e-08,11;UBERON:0004119,1.55e-08,160;UBERON:0000925,1.55e-08,160;UBERON:0006595,1.55e-08,160;UBERON:0003102,1.58e-08,99;UBERON:0001004,1.07e-07,74;UBERON:0003729,2.45e-07,13;UBERON:0011137,8.06e-07,14 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.83884244895785,0.6024118375565,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773043412653187,1.63647672354501,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241011029883482,0.110293972732394,0,0,0.134831308160164,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0,1.86575485194663,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.74935335947108,1.34385702559088,1.27597587518148,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.82228469334453,0.460404944679482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.89118645595407,3.25030123018261,0,0,0,0,0,0,0,0,0,11.9005139059904,12.684544446097,14.1650110868988,5.36136238534415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384888450902048,0,0,0,4.73555909938353,6.73885902670502,7.09488245658681,19.0670422171776,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.26739473068848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.697118721393016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.942776138467182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0.383830394638891,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.20114318226015,1.96393632455575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336283722218824,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705789743431384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr5:146263947..146263959,- | |||
}} |
Revision as of 08:06, 22 January 2014
Short description: | p@chr5:146263947..146263959, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:146263947..146263959, - |
Coexpression cluster: | C515_Small_Urothelial_Sebocyte_Prostate_Bronchial_Mallassezderived_Esophageal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
transitional epithelial cell | 7.76e-41 | 4 |
urothelial cell | 7.76e-41 | 4 |
epithelial cell of Malassez | 1.01e-29 | 3 |
general ecto-epithelial cell | 7.36e-25 | 14 |
sebum secreting cell | 4.70e-21 | 2 |
epithelial cell of sweat gland | 4.70e-21 | 2 |
epithelial cell of skin gland | 4.70e-21 | 2 |
acinar cell of sebaceous gland | 4.70e-21 | 2 |
respiratory epithelial cell | 2.02e-19 | 13 |
endo-epithelial cell | 4.05e-18 | 42 |
epithelial cell | 3.85e-13 | 253 |
endodermal cell | 8.49e-13 | 58 |
epidermal cell | 1.53e-10 | 9 |
ecto-epithelial cell | 4.99e-10 | 34 |
acinar cell | 5.49e-09 | 5 |
protein secreting cell | 1.25e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
urothelium | 9.40e-33 | 5 |
transitional epithelium | 2.34e-27 | 6 |
jaw skeleton | 1.78e-22 | 4 |
splanchnocranium | 1.78e-22 | 4 |
skin gland | 4.70e-21 | 2 |
epidermis gland | 4.70e-21 | 2 |
gland of integumental system | 4.70e-21 | 2 |
sebaceous gland | 4.70e-21 | 2 |
skin sebaceous gland | 4.70e-21 | 2 |
sweat gland | 4.70e-21 | 2 |
sweat gland placode | 4.70e-21 | 2 |
sebaceous gland placode | 4.70e-21 | 2 |
primary subdivision of cranial skeletal system | 4.07e-18 | 5 |
protuberance | 3.33e-15 | 6 |
pharyngeal arch | 3.33e-15 | 6 |
embryonic head | 3.33e-15 | 6 |
mucosa of oral region | 8.53e-11 | 4 |
respiratory system mucosa | 8.53e-11 | 4 |
pharyngeal arch system | 6.57e-09 | 18 |
cranial skeletal system | 1.51e-08 | 11 |
endoderm-derived structure | 1.55e-08 | 160 |
endoderm | 1.55e-08 | 160 |
presumptive endoderm | 1.55e-08 | 160 |
surface structure | 1.58e-08 | 99 |
respiratory system | 1.07e-07 | 74 |
mouth mucosa | 2.45e-07 | 13 |
axial skeletal system | 8.06e-07 | 14 |