FFCP PHASE1:Hg19::chr5:149532703..149532711,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C368 | |||
|description=CAGE_peak_at_chr5:149532703..149532711,+ | |||
|id=chr5:149532703..149532711,+ | |||
|ontology_enrichment_celltype=CL:0002590!1.11e-20!3;CL:0000064!9.59e-20!3;CL:0005012!9.59e-20!3;CL:0000067!9.59e-20!3;CL:0002304!9.59e-20!3;CL:0002575!7.36e-15!2;CL:0002564!6.55e-10!3;CL:0000708!7.15e-10!3;CL:0002568!1.18e-07!1 | |||
|ontology_enrichment_celltype_v019=CL:0002575;7.41e-67;2!CL:0000669;4.28e-34;4!CL:0002549;1.07e-17;2!CL:0002590;2.31e-12;3!CL:0002564;3.24e-12;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002575,7.41e-67,2;CL:0000669,4.28e-34,4;CL:0002549,1.07e-17,2;CL:0002590,2.31e-12,3;CL:0002564,3.24e-12,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002200!2.10e-28!11;UBERON:0006876!2.10e-28!11;UBERON:0005284!9.79e-22!5;UBERON:0001778!9.59e-20!3;UBERON:0001775!9.59e-20!3;UBERON:0000488!5.87e-15!4;UBERON:0002203!3.78e-10!6;UBERON:0001768!3.78e-10!6;UBERON:0002242!6.55e-10!3;UBERON:0003068!6.55e-10!3;UBERON:0002328!6.55e-10!3;UBERON:0004880!6.55e-10!3;UBERON:0003210!7.15e-10!3;UBERON:0002372!7.97e-08!1;UBERON:0001961!7.97e-08!1;UBERON:0001744!7.97e-08!1;UBERON:0001735!7.97e-08!1;UBERON:0007190!1.87e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0005284;3.11e-27;5!UBERON:0005629;1.07e-17;2!UBERON:0005358;1.07e-17;2!UBERON:0001886;1.07e-17;2!UBERON:0004086;1.07e-17;2!UBERON:0005282;1.07e-17;2!UBERON:0005281;1.07e-17;2!UBERON:0006876;5.42e-13;11!UBERON:0002242;3.24e-12;3!UBERON:0011135;7.49e-08;5!UBERON:0002216;7.49e-08;5!UBERON:0011134;7.49e-08;5!UBERON:0002209;7.49e-08;5!UBERON:0002213;7.49e-08;5!UBERON:0007844;7.49e-08;5!UBERON:0011138;7.49e-08;5!UBERON:0001130;7.49e-08;5!UBERON:0001066;7.49e-08;5!UBERON:0001468;7.49e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005284,3.11e-27,5;UBERON:0005629,1.07e-17,2;UBERON:0005358,1.07e-17,2;UBERON:0001886,1.07e-17,2;UBERON:0004086,1.07e-17,2;UBERON:0005282,1.07e-17,2;UBERON:0005281,1.07e-17,2;UBERON:0006876,5.42e-13,11;UBERON:0002242,3.24e-12,3;UBERON:0003068,3.24e-12,3;UBERON:0002328,3.24e-12,3;UBERON:0004880,3.24e-12,3;UBERON:0011135,7.49e-08,5;UBERON:0002216,7.49e-08,5;UBERON:0011134,7.49e-08,5;UBERON:0002209,7.49e-08,5;UBERON:0002213,7.49e-08,5;UBERON:0005856,7.49e-08,5;UBERON:0005866,7.49e-08,5;UBERON:0005863,7.49e-08,5;UBERON:0007844,7.49e-08,5;UBERON:0011138,7.49e-08,5;UBERON:0001130,7.49e-08,5;UBERON:0001066,7.49e-08,5;UBERON:0001468,7.49e-08,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0.221729397462564,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.27036141467397,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211931901159562,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.448524337381443,0,0.2933531432838,0.129271715757778,3.57656445851882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00034104211935,0.271265023699736,0.207970861530807,0,0,0,0,0,0,0,0,0,59.5235518686731,7.20601190002797,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.09374206295634,0.632758849437452,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521745061811734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0.202056159043763,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p@chr5:149532703..149532711,+ | |||
}} |
Revision as of 08:16, 22 January 2014
Short description: | p@chr5:149532703..149532711, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:149532703..149532711, + |
Coexpression cluster: | C368_Pericytes_Fibroblast_Nucleus_Anulus_Meningeal_Mesenchymal_Smooth |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system pericyte | 7.41e-67 | 2 |
pericyte cell | 4.28e-34 | 4 |
fibroblast of choroid plexus | 1.07e-17 | 2 |
smooth muscle cell of the brain vasculature | 2.31e-12 | 3 |
nucleus pulposus cell of intervertebral disc | 3.24e-12 | 3 |
Ontology term | p-value | n |
---|---|---|
brain vasculature | 3.11e-27 | 5 |
vascular plexus | 1.07e-17 | 2 |
ventricle of nervous system | 1.07e-17 | 2 |
choroid plexus | 1.07e-17 | 2 |
brain ventricle | 1.07e-17 | 2 |
ventricular system of brain | 1.07e-17 | 2 |
ventricular system of central nervous system | 1.07e-17 | 2 |
vasculature of organ | 5.42e-13 | 11 |
nucleus pulposus | 3.24e-12 | 3 |
axial mesoderm | 3.24e-12 | 3 |
notochord | 3.24e-12 | 3 |
chordamesoderm | 3.24e-12 | 3 |
intervertebral cartilage | 7.49e-08 | 5 |
symphysis | 7.49e-08 | 5 |
nonsynovial joint | 7.49e-08 | 5 |
fibrous joint | 7.49e-08 | 5 |
cartilaginous joint | 7.49e-08 | 5 |
developing mesenchymal condensation | 7.49e-08 | 5 |
pre-cartilage condensation | 7.49e-08 | 5 |
cartilaginous condensation | 7.49e-08 | 5 |
cartilage element | 7.49e-08 | 5 |
post-cranial axial skeletal system | 7.49e-08 | 5 |
vertebral column | 7.49e-08 | 5 |
intervertebral disk | 7.49e-08 | 5 |
intervertebral joint | 7.49e-08 | 5 |