FFCP PHASE1:Hg19::chr5:154135029..154135044,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23367 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29531 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-90bp_to_ENST00000518297_5end | |||
|description=CAGE_peak_17_at_LARP1_5end | |||
|id=chr5:154135029..154135044,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002322;3.09e-07;5!CL:0002144;5.83e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,8.38e-08,5;CL:0002144,4.49e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0010523;5.83e-07;3!UBERON:0001915;5.83e-07;3!UBERON:0001982;5.83e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010523,4.49e-07,3;UBERON:0001915,4.49e-07,3;UBERON:0001982,4.49e-07,3 | |||
|phase1_expression=0.181678379270557,0.642301571672949,0.563817616383885,2.00146596706261,1.34088328328186,0,0,1.26343974685366,0,0.737201809504527,1.39560233594486,0.436882744260345,0.791300934685361,0.123766352960047,0.331397375727916,0,0,0,0,0.492484232307152,0.612002073732759,0.940364164434263,0,0.547497700291537,0.376627918784408,0.458480434487708,0.328402357799783,0.314843125254717,0,0,0.619264493264304,0,0.30120591877825,0,0.154934401160603,0.142169232487422,0,1.10799081706375,0,0,0.447830948479849,0.32389366601898,0,0.145398238779565,0,0.242584061187816,0.464858073811369,0,0.309706370895104,0,0,0,0,0,0,0.188242339542605,0,0,0.306083892370903,0,0.639337125799041,0,0,0,0,0.56738522469114,0,0,0,0.217188844705117,0,0,0,0.422510572623884,0,0,0,0.300353785683013,0,0.285012743741249,0,0,0,0,0,0.426730222566507,0,0,0,0.954053754535364,0,0,0.382273228125229,0,1.12101712596307,0,0,0,0.205601498999509,0,0,0,1.94826728407911,0,0,0,0,0,0,0.328875809207352,0,0,0.444859689486181,0,0,0,0.383220493601921,0.34362744548263,0,0,0,0,0.301150238155546,0.255973222308837,0,0,0,0.201606743224732,0.267440195783507,0.289648807765598,0,0.670700859703636,0.255725123687061,0.361439152384566,0.50133791063589,0.144846518960824,0,0,0.567208902984407,0.221729397462564,0.702678285545008,0.785874452986276,0.364295288292542,1.11235332835329,0.324547393654683,0.870648686496336,0.398873881556595,0.238490624305342,0,0,1.59009925893364,0,0.347140501607594,0,1.25849830862972,1.6507082516404,1.8809546988313,0.516833518338658,1.06729878806013,0.66944122552934,1.20848795132744,1.52054421143703,2.19655851793353,0,0.81014194788176,0.357198913136319,0,0.563057402416611,3.06633274931766,0,0.732806975721629,0,0,0.872188104285069,0,0.25326102332916,0.529636723252875,0.286836620748814,0.709336764396714,0.560677600142307,2.1349799145941,0.74000264525148,0.311211035399766,1.48181739276657,0.490385709340376,0.756787138224657,0,0.468642863667593,0.936480230490962,0.570471821544449,0.896692083310806,0.939475989150119,0.809364721840658,0.561803226808994,0.61246251376468,0.245668634623536,0.309977343527296,1.18800285728205,0.494533858557114,0,0,0.168336113954066,0.625592599359821,0.831192346452549,0,0,0.300476117813194,0.794025282120147,0.358779271377724,0.213557388818567,0.635795703478686,0.600182192168805,0.721367704669072,0.515281080091258,0,0.506328996723799,0.0974370051611986,0.252433774244115,0.0920498986422993,0.161646056818812,0.710019185033229,0.503760491138201,0.339121184620975,0,0.272746120590835,0.860413786167011,3.17131635936948,0.662648841607426,1.74290914304278,1.86589899027667,2.77552935963191,0.72995471815166,0,0.643240938192885,0,0,0.721879481669586,0.354920400119532,0.674338760312407,1.20505514941741,0.772057809126758,0.871517776369625,0.237270619111097,0.134831308160164,0.392442930250692,0.38474715694639,0.738155454624648,0,0.8231480226628,1.47008711385542,0,0,0.590789906681404,0,0.737930631258681,0.514703430895577,0.219500570817251,0,0.201057944823262,0,0.977424915930974,1.03993478527958,0,0.34779121492523,0.70445216541493,0.721832238805369,0.925971025153221,0.951270761172991,0,0,0.738651018262192,0.468008530278475,0.148631162288728,0,0.16798212819886,0.425325291727159,0,0,0.383382679165211,0,0.264145302039678,1.24396869324463,0.864719720501769,1.76739406796932,0.761974731506028,1.52795370223311,1.17217447210047,0,0.308482478109971,0.300343057843917,0,1.12131084345361,0.87192013766656,0.36669142910475,0.775630294546667,3.57656445851882,0,0.797814349754612,1.04007436911366,1.02882949704857,1.41849132023278,0.266422179016099,0.285955987316295,0,1.64648067356154,0.65147236858747,1.06617584622764,0.791951872933429,0.602878754119172,0,0.599837947092342,0,0,0,1.19812427745791,0,1.42636905040718,0,0.205476322550383,0.716243852959582,0.112085143993527,0,0,0.128343036279748,0.76228387266739,0,0,0,0,0,0,0,0.24538298343828,0.500170521059677,0.813795071099207,0,0.356857977594324,0.157702415033935,0.234282829985426,2.40756879782175,0,0,0,1.29058417979192,0.868836144680828,1.95801157462741,0.686286847621712,0,0,0,0,0,0.604780586659361,0,0.153461973288062,0.561320188866147,0.384417447767103,0.511707249066704,0.64341568457443,0,0.925258162815933,1.24293207719189,1.14978018419333,0.519254429183621,1.04589340613963,1.81289174387433,0.200506470303285,0.368323955743585,0.68888668898764,0.364182336013434,1.44236856455367,0.902399225814824,0.0770153371044148,0.784349769176855,1.46139224653261,0.211103257785751,0,0.680374821106063,0.431831832204279,0,0.812839312631559,0.501689773854853,0.509752546090077,0.831076008928724,0.895499018888713,0,0,0,0,0,0.103041011647722,0.183138929636687,0.082509499920588,0,0.650060246036521,1.6068392984416,0.676695028044854,0.770243085573222,0.307007349452259,0.275673144969061,0.322260734604821,0.580066775656914,0.767039646744908,0.979352392114111,0.330569830721956,0.384380134730212,0.127612712494584,0.10115778085555,0,0.31481234683064,0.6970372701606,0.924100740528266,1.59691809095107,0,0.55597265731176,0.143124886741991,0.3721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| |||
|short_description=p17@LARP1 | |||
}} |
Revision as of 08:37, 22 January 2014
Short description: | p17@LARP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_LARP1_5end |
Coexpression cluster: | NA |
Association with transcript: | -90bp_to_ENST00000518297_5end |
EntrezGene: | LARP1 |
HGNC: | 29531 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 8.38e-08 | 5 |
capillary endothelial cell | 4.49e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
microcirculatory vessel | 4.49e-07 | 3 |
endothelium of capillary | 4.49e-07 | 3 |
capillary | 4.49e-07 | 3 |