FFCP PHASE1:Hg19::chr6:45352470..45352474,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C216 | |||
|description=CAGE_peak_at_chr6:45352470..45352474,+ | |||
|id=chr6:45352470..45352474,+ | |||
|ontology_enrichment_celltype=CL:0000128!2.74e-11!7;CL:0000126!2.74e-11!7;CL:0000127!2.74e-11!7;CL:0002453!2.74e-11!7;CL:0002605!5.14e-08!3;CL:0000064!1.19e-07!3;CL:0005012!1.19e-07!3;CL:0000067!1.19e-07!3;CL:0002304!1.19e-07!3;CL:0000594!3.05e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002605;3.19e-38;3!CL:0000128;1.23e-36;7!CL:0000126;1.23e-36;7!CL:0000127;1.23e-36;7!CL:0000062;3.84e-29;9!CL:0000243;1.33e-15;15!CL:0000125;1.33e-15;15!CL:0000095;4.84e-14;17!CL:0000064;1.04e-10;3!CL:0000067;1.04e-10;3!CL:0005012;1.04e-10;3!CL:0002304;1.04e-10;3!CL:0002603;1.04e-10;3!CL:0002319;4.25e-10;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,3.86e-38,3;CL:0000128,1.16e-36,7;CL:0000126,1.16e-36,7;CL:0000127,1.16e-36,7;CL:0002453,1.16e-36,7;CL:0000062,5.23e-24,11;CL:0000375,5.23e-24,11;CL:0000335,5.23e-24,11;CL:0000243,1.30e-15,15;CL:0000125,1.30e-15,15;CL:0000030,1.30e-15,15;CL:0000339,1.30e-15,15;CL:0000095,4.74e-14,17;CL:0000123,4.74e-14,17;CL:0002603,8.99e-11,3;CL:0000064,1.09e-10,3;CL:0000067,1.09e-10,3;CL:0005012,1.09e-10,3;CL:0002304,1.09e-10,3;CL:0002319,4.19e-10,25;CL:0000133,7.27e-08,59 | |||
|ontology_enrichment_development_v019=CL:0000335;5.23e-24;11!CL:0000339;1.33e-15;15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000488!2.87e-09!4;UBERON:0001778!1.19e-07!3;UBERON:0001775!1.19e-07!3;UBERON:0002346!1.73e-07!90;UBERON:0003075!3.12e-07!86;UBERON:0007284!3.12e-07!86;UBERON:0000153!4.94e-07!129;UBERON:0007811!4.94e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0001474;5.40e-15;18!UBERON:0001778;1.04e-10;3!UBERON:0001775;1.04e-10;3!UBERON:0004765;1.31e-10;26!UBERON:0000488;2.35e-08;4!UBERON:0001434;6.43e-08;36 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001778,1.09e-10,3;UBERON:0001775,1.09e-10,3;UBERON:0000488,2.43e-08,4 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0,1.56727360739044,0.572471974262113,1.09499540058307,1.25542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34362744548263,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,1.22895262313288,0.221729397462564,0.966182642624386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0.245668634623536,0.103325781175765,0,0.494533858557114,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0.0925884451585296,0,0,0,0.115930404975077,0,0,0,0,0,0,0.246217006087397,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0.791951872933429,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0.254094624222463,0,0,0,0.637938751653163,0,0,0,0,0,0,0.207970861530807,0,0.157702415033935,0,0,0,0,0,0,0,0,0.343143423810856,0.413536052245775,0,0,0,0,0,0,0.153461973288062,0,0,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.48690377609883,4.70304149547352,0,0,0,0,0,0,0,0.859361958946189,0.290033387828457,0.170453254832202,0.0890320356467374,0,0,0.127612712494584,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0.159426272728822,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0.19538809540204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.659215496907038,0.422250816255987,0,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0.341826167541004,0,0,0.217294743844016,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0.30607276163049,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821154570532092,0,0,0,0.274083849293502,0,0.0633107959558787,0,0,0,0,0,0,0,0,0.124252535565433,0,0,0,0.101998217636322,0,0,0,0,0,0.525774708558629,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.851940108927109,0,0,0,0,0,0,0,0.106787412567695,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0.250381861413,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464033759878494,0,0,0,0.336749488765919,0,0,0,0,0.226705925512272,0,0,0.179088841081487,0,0.219284049578707,0,0,0,0.256241518587947,0,0,0,0,0,0,0,0.737318726261158,0,0,0,0,0,0,0,0,0,0,0.314531883711793,0,0,0,0.495743057036009,0.558644917973244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.16640288560452,0,0.20170506870352,0,0,0,0.147856086217045,0,0,0.206686796501184,0,0,0,0,0,0,0.535701835878287,0.336283722218824,0,0,0,0,0,0,0,0,0,0,0.157115589916002,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436350690340377,0,0,0,0,0,0,0.380095503034311,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0.224263725161227,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr6:45352470..45352474,+ | |||
}} |
Revision as of 12:08, 22 January 2014
Short description: | p@chr6:45352470..45352474, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:45352470..45352474, + |
Coexpression cluster: | C216_osteosarcoma_Smooth_Mesenchymal_large_neuroectodermal_acute_CD34 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 3.86e-38 | 3 |
oligodendrocyte | 1.16e-36 | 7 |
macroglial cell | 1.16e-36 | 7 |
astrocyte | 1.16e-36 | 7 |
oligodendrocyte precursor cell | 1.16e-36 | 7 |
osteoblast | 5.23e-24 | 11 |
osteoprogenitor cell | 5.23e-24 | 11 |
mesenchyme condensation cell | 5.23e-24 | 11 |
glial cell (sensu Vertebrata) | 1.30e-15 | 15 |
glial cell | 1.30e-15 | 15 |
glioblast | 1.30e-15 | 15 |
glioblast (sensu Vertebrata) | 1.30e-15 | 15 |
neuron associated cell | 4.74e-14 | 17 |
neuron associated cell (sensu Vertebrata) | 4.74e-14 | 17 |
astrocyte of the cerebellum | 8.99e-11 | 3 |
ciliated cell | 1.09e-10 | 3 |
ciliated epithelial cell | 1.09e-10 | 3 |
multi-ciliated epithelial cell | 1.09e-10 | 3 |
non-pigmented ciliary epithelial cell | 1.09e-10 | 3 |
neural cell | 4.19e-10 | 25 |
neurectodermal cell | 7.27e-08 | 59 |
Ontology term | p-value | n |
---|---|---|
ciliary epithelium | 1.09e-10 | 3 |
ciliary body | 1.09e-10 | 3 |
atypical epithelium | 2.43e-08 | 4 |