FFCP PHASE1:Hg19::chr7:28610099..28610113,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9586 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16844 | |||
|TSSclassifier=weak | |||
|UniProt= | |||
|association_with_transcript=43bp_to_ENST00000461921_5end | |||
|coexpression_cluster_id=C36 | |||
|description=CAGE_peak_5_at_CREB5_5end | |||
|id=chr7:28610099..28610113,+ | |||
|ontology_enrichment_celltype=CL:0000945!8.05e-20!24;CL:0000826!8.05e-20!24;CL:0000817!1.05e-11!3;CL:1000497!9.80e-11!18;CL:0002518!9.80e-11!18;CL:0000542!7.16e-09!53;CL:0000051!7.16e-09!53;CL:0000785!2.63e-08!2;CL:0000955!2.63e-08!2;CL:0000818!2.63e-08!2;CL:0000954!2.63e-08!2;CL:0000816!2.63e-08!2;CL:0000159!6.77e-08!2;CL:0000838!1.19e-07!52;CL:1000449!6.48e-07!16;CL:1000507!9.23e-07!12;CL:1000494!9.23e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0000945;1.03e-50;24!CL:0000542;2.21e-13;53!CL:0000817;3.71e-10;1!CL:0000946;4.06e-10;1!CL:0000786;4.06e-10;1!CL:0000785;9.40e-10;1!CL:0000819;9.40e-10;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,8.85e-51,24;CL:0000826,8.85e-51,24;CL:0000817,1.59e-26,3;CL:0000542,7.32e-26,53;CL:0000051,7.32e-26,53;CL:0000838,2.07e-22,52;CL:0000785,3.77e-18,2;CL:0000955,3.77e-18,2;CL:0000818,3.77e-18,2;CL:0000954,3.77e-18,2;CL:0000816,3.77e-18,2;CL:0002087,1.27e-10,115;CL:0000946,4.06e-10,1;CL:0000786,4.06e-10,1;CL:0000980,4.06e-10,1;CL:0000819,8.99e-10,1;CL:0000738,1.19e-08,136;CL:0002031,1.72e-08,120;CL:0002032,5.65e-07,161;CL:0000837,5.65e-07,161 | |||
|ontology_enrichment_development_v019=CL:0000954;3.93e-18;2!CL:0000051;2.21e-13;53 | |||
|ontology_enrichment_disease=DOID:0060058!5.92e-13!10;DOID:4468!2.63e-08!2 | |||
|ontology_enrichment_disease_v019=DOID:0060058;3.51e-31;10!DOID:4468;3.45e-18;2!DOID:2355;1.89e-10;1!DOID:12603;4.64e-10;1!DOID:630;6.33e-10;1!DOID:0050177;6.33e-10;1!DOID:0050427;6.33e-10;1!DOID:0060073;9.40e-10;1!DOID:8675;9.40e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,2.85e-31,10;DOID:4468,3.77e-18,2;DOID:2355,1.80e-10,1;DOID:12603,4.44e-10,1;DOID:2531,5.14e-10,51;DOID:0060083,5.14e-10,51;DOID:630,5.79e-10,1;DOID:0050177,5.79e-10,1;DOID:0050427,5.79e-10,1;DOID:0060073,8.99e-10,1;DOID:8675,8.99e-10,1;DOID:0050686,4.20e-07,137 | |||
|ontology_enrichment_uberon=UBERON:0002113!1.70e-10!27;UBERON:0003918!1.70e-10!27;UBERON:0005095!1.70e-10!27;UBERON:0007687!1.70e-10!27;UBERON:0000489!1.49e-08!32;UBERON:0003887!5.69e-07!21;UBERON:0004211!6.48e-07!16;UBERON:0001285!6.48e-07!16;UBERON:0007684!6.48e-07!16;UBERON:0003220!6.48e-07!16;UBERON:0004208!6.48e-07!16;UBERON:0009773!9.23e-07!12;UBERON:0001231!9.23e-07!12;UBERON:0004810!9.23e-07!12 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,47.5291383752257,40.7218923671731,45.5735423806203,0,0,0,0,0,0,68.4035381124063,28.2916772649969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451199612907412,0.385076685522074,0,0,0.105551628892876,0,0,0.215915916102139,0,0,0,1.01950509218015,0,0.223874754722178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.9895365304059,10.8201909732334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.445234820091624,0,0,0,0.828851746593443,0,0,16.2471943208612,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,2.3209787098083,4.08082020397869,0,0,0,0,0,0.296521128680622,0,0,0,0.802577647298789,0,1.45963831372533,0,0,0,0,0,0,0,0,0,0,0,0,14.2304773014896,0,0,0,0,0,0,0,0,0,0,0,0,0.137041924646751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,47.8404326171682,0,0,0,0,0,0,0,0.0607495566580247,0,0.0788057072991982,1.04909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70509637733254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429642228169954,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28120759293973,0,0,0,0,0,0,0,0.491545817507439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23658523500376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.40341013740704,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,9.21871900446234,0,0.0679697329768317,0,0,0,0,0,0,0,0.431855182437243,2.38875843943525,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,1.5510319283216,0,0.447421727191169,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0,0,16.2904084157634,0,7.76368717774522,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0.213233981900981,0,0,0,0.33639558774184,0,0,0,0,0.336760265072938,0,0,0,0.106727345877715,0,0,0,0,0,0,0,2.56454793842586 | |||
|short_description=p5@CREB5 | |||
}} |
Revision as of 16:16, 22 January 2014
Short description: | p5@CREB5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_CREB5_5end |
Coexpression cluster: | C36_B_b_splenic_plasma_xeroderma_adrenal_Burkitt |
Association with transcript: | 43bp_to_ENST00000461921_5end |
EntrezGene: | CREB5 |
HGNC: | 16844 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 8.85e-51 | 24 |
pro-B cell | 8.85e-51 | 24 |
precursor B cell | 1.59e-26 | 3 |
lymphocyte | 7.32e-26 | 53 |
common lymphoid progenitor | 7.32e-26 | 53 |
lymphoid lineage restricted progenitor cell | 2.07e-22 | 52 |
mature B cell | 3.77e-18 | 2 |
pre-B-II cell | 3.77e-18 | 2 |
transitional stage B cell | 3.77e-18 | 2 |
small pre-B-II cell | 3.77e-18 | 2 |
immature B cell | 3.77e-18 | 2 |
nongranular leukocyte | 1.27e-10 | 115 |
antibody secreting cell | 4.06e-10 | 1 |
plasma cell | 4.06e-10 | 1 |
plasmablast | 4.06e-10 | 1 |
B-1 B cell | 8.99e-10 | 1 |
leukocyte | 1.19e-08 | 136 |
hematopoietic lineage restricted progenitor cell | 1.72e-08 | 120 |
hematopoietic oligopotent progenitor cell | 5.65e-07 | 161 |
hematopoietic multipotent progenitor cell | 5.65e-07 | 161 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 2.85e-31 | 10 |
clear cell adenocarcinoma | 3.77e-18 | 2 |
anemia | 1.80e-10 | 1 |
acute leukemia | 4.44e-10 | 1 |
hematologic cancer | 5.14e-10 | 51 |
immune system cancer | 5.14e-10 | 51 |
genetic disease | 5.79e-10 | 1 |
monogenic disease | 5.79e-10 | 1 |
xeroderma pigmentosum | 5.79e-10 | 1 |
lymphatic system cancer | 8.99e-10 | 1 |
lymphosarcoma | 8.99e-10 | 1 |
organ system cancer | 4.20e-07 | 137 |