FFCP PHASE1:Hg19::chr7:34797868..34797879,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=404744 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=4bp_to_ENST00000358772,ENST00000439852,ENST00000537560,ENST00000544556,NR_033664,NR_033665,uc003teb.1,uc010kwo.1,uc010kwp.1_5end | |||
|coexpression_cluster_id=C1140 | |||
|description=CAGE_peak_4_at_AAA1_5end | |||
|id=chr7:34797868..34797879,- | |||
|ontology_enrichment_celltype=CL:0000181!3.60e-12!12;CL:0000417!3.60e-12!12;CL:0000668!3.60e-12!12;CL:0000414!3.60e-12!12;CL:0000412!3.60e-12!12;CL:0000182!3.60e-12!12;CL:0002535!6.94e-09!2 | |||
|ontology_enrichment_celltype_v019=CL:0000945;3.20e-13;24!CL:0000182;5.99e-12;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,3.20e-13,24;CL:0000826,3.20e-13,24;CL:0000182,5.67e-12,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.84e-27;11!UBERON:0009497;2.21e-23;13!UBERON:0001041;1.33e-10;30!UBERON:0003104;4.48e-10;31 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!2.88e-13!19;UBERON:0006925!2.88e-13!19;UBERON:0008836!2.88e-13!19;UBERON:0008835!1.68e-11!22;UBERON:0003894!1.68e-11!22;UBERON:0009854!5.17e-11!23;UBERON:0007499!3.73e-10!25;UBERON:0009497!3.73e-10!25;UBERON:0000015!3.73e-10!25;UBERON:0002423!3.73e-10!25;UBERON:0006235!3.73e-10!25;UBERON:0004161!3.73e-10!25;UBERON:0005172!8.82e-10!55;UBERON:0005173!8.82e-10!55;UBERON:0005057!8.96e-10!26;UBERON:0009856!8.96e-10!26;UBERON:0006955!6.94e-09!2;UBERON:0004801!6.94e-09!2;UBERON:0002417!8.58e-09!61;UBERON:0000916!8.58e-09!61;UBERON:0002365!3.08e-08!31;UBERON:0002330!3.08e-08!31;UBERON:0002368!2.54e-07!35;UBERON:0003929!4.31e-07!54 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.80e-16;19!UBERON:0006925;2.80e-16;19!UBERON:0002423;1.44e-12;25!UBERON:0002365;4.48e-10;31!UBERON:0002330;4.48e-10;31!UBERON:0002368;5.08e-09;33!UBERON:0000949;8.30e-07;43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.80e-16,19;UBERON:0006925,2.80e-16,19;UBERON:0008836,2.80e-16,19;UBERON:0008835,3.58e-14,22;UBERON:0003894,3.58e-14,22;UBERON:0009854,1.36e-13,23;UBERON:0007499,1.44e-12,25;UBERON:0009497,1.44e-12,25;UBERON:0000015,1.44e-12,25;UBERON:0002423,1.44e-12,25;UBERON:0006235,1.44e-12,25;UBERON:0004161,1.44e-12,25;UBERON:0009856,4.09e-12,26;UBERON:0002365,2.77e-10,31;UBERON:0002330,2.77e-10,31;UBERON:0002368,3.43e-09,35;UBERON:0000949,2.66e-07,45 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.67446920117829,2.29881650459848,2.20390187678302,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41809728153003,0.824158583811665,1.81989568406299,0,0,0,0,0,0,0,0,0,0,0,0.157611414598396,0.472091293214983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32506888912221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.874238242015829,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p4@AAA1 | |||
}} |
Revision as of 16:28, 22 January 2014
Short description: | p4@AAA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_AAA1_5end |
Coexpression cluster: | C1140_hepatocellular_B_small_gastrointestinal_argyrophil_liver_temporal |
Association with transcript: | 4bp_to_ENST00000358772, ENST00000439852, ENST00000537560, ENST00000544556, NR_033664, NR_033665, uc003teb.1, uc010kwo.1, uc010kwp.1_5end |
EntrezGene: | AAA1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 3.20e-13 | 24 |
pro-B cell | 3.20e-13 | 24 |
hepatocyte | 5.67e-12 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 2.80e-16 | 19 |
digestive gland | 2.80e-16 | 19 |
liver bud | 2.80e-16 | 19 |
hepatic diverticulum | 3.58e-14 | 22 |
liver primordium | 3.58e-14 | 22 |
digestive tract diverticulum | 1.36e-13 | 23 |
epithelial sac | 1.44e-12 | 25 |
epithelium of foregut-midgut junction | 1.44e-12 | 25 |
anatomical boundary | 1.44e-12 | 25 |
hepatobiliary system | 1.44e-12 | 25 |
foregut-midgut junction | 1.44e-12 | 25 |
septum transversum | 1.44e-12 | 25 |
sac | 4.09e-12 | 26 |
exocrine gland | 2.77e-10 | 31 |
exocrine system | 2.77e-10 | 31 |
endocrine gland | 3.43e-09 | 35 |
endocrine system | 2.66e-07 | 45 |