FFCP PHASE1:Hg19::chr7:55640176..55640228,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=81552 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=34518 | |||
|TSSclassifier=strong | |||
|UniProt=Q96AW1 | |||
|association_with_transcript=0bp_to_ENST00000285279,NM_030796,uc003tqs.2_5end | |||
|description=CAGE_peak_1_at_VOPP1_5end | |||
|id=chr7:55640176..55640228,- | |||
|ontology_enrichment_celltype=CL:0000738!2.12e-13!140;CL:0002087!1.42e-12!119;CL:0002031!8.62e-10!124;CL:0000542!7.99e-08!53;CL:0000051!7.99e-08!53;CL:0000838!1.95e-07!52 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.33e-14,136;CL:0002087,1.34e-13,115;CL:0002031,1.28e-10,120;CL:0000542,7.99e-08,53;CL:0000051,7.99e-08,53;CL:0000838,1.95e-07,52;CL:0000115,5.99e-07,36 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!2.85e-09!216;UBERON:0002390!9.57e-08!102;UBERON:0003061!9.57e-08!102;UBERON:0002193!2.37e-07!112 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003081,1.17e-08,203;UBERON:0002390,1.54e-08,98;UBERON:0003061,1.54e-08,98;UBERON:0002193,4.54e-08,108;UBERON:0000926,4.37e-07,315;UBERON:0004120,4.37e-07,315;UBERON:0006603,4.37e-07,315;UBERON:0002405,7.49e-07,93 | |||
|phase1_expression=17.8044811685145,16.6998408634967,17.4783461079004,17.0124607200322,15.6436383049551,17.4467704820074,12.6649939084155,13.8978372153903,15.6711376919903,13.515366507583,26.5164443829522,5.46103430325431,7.64924236862515,9.65377553088364,12.5931002776608,4.03395087871065,9.64311244838363,5.11217063271161,14.6379839637152,10.8346531107573,15.0960511520747,13.7920077450359,7.15589967827642,12.0449494064138,11.1732949239374,15.8175749898259,17.7337273211883,13.6956759485802,10.2274711980715,10.747223146722,11.7660253720218,11.0330546937471,22.2892379895905,8.8740962440029,9.5284656713771,18.19766175839,2.93600439334847,14.9578760303607,14.6397446653203,19.5309783644267,25.0785331148715,21.7008756232716,21.8939232489059,17.0115939372091,14.3592858601748,21.8325655069035,14.1781712512468,14.8020439687857,16.1047312865454,12.9461576544968,10.246428261164,7.33094912654614,11.721353145045,8.39130088658974,14.8969135253776,18.07126459609,10.0975275521403,13.9328560355952,15.9163624032869,9.62787081228281,12.7867425159808,17.482118909896,10.3721101963249,18.3276642729058,19.4440189881151,18.1563271901165,18.0618452208717,11.5574386018102,10.429658368404,10.8594422352558,13.3187890579341,9.94349617166425,9.81033401066742,6.5489138756702,8.07896339867165,8.17668717482666,5.05478840159228,5.40636814229423,5.94684670779196,7.12531859353121,7.9566670879636,7.67189445811463,10.5597746676794,10.9227722252426,12.4531295540898,10.6682555641627,10.0098996759003,6.8970292794538,16.5261218196216,10.494591299889,13.0918982895173,9.98303221930596,11.0859236156316,0,6.72610275577843,4.74091352595139,22.424913792977,22.7946242394516,24.0553753829426,7.85776528336187,16.9479578649467,12.3096429491031,9.74133642039557,12.0323293435987,12.9626599288928,14.8427709371026,12.7277815969557,13.8338625303729,14.4365875791465,15.7860388419529,12.1594007825773,7.82468331484642,9.93519973185805,10.4340922954988,10.4535523804977,9.06474741580529,15.3288197440768,14.4323527102705,10.3738073727996,14.6540090589084,14.9749194386976,13.3063286222772,10.8414085735996,11.1348351704344,8.74515085866421,14.443412374685,18.8859439291841,13.5076517960571,16.0464117470104,14.7720891960455,2.43806866313962,6.70700859703636,2.9408389224012,7.59022220007589,11.0294340339896,5.64901423947212,3.1811437882044,8.75942766544745,11.6277825111803,11.9733874629785,12.8238787111964,6.94189100137877,22.5863078741376,8.89882662682631,29.5338128225762,28.2090174424813,30.3144149983013,7.63169997777094,5.71994910780128,5.20040501861391,11.1306948125355,6.02164216574287,11.4556365530506,17.5245461996443,14.2629808311368,20.358735103565,14.8386426241136,12.6624211992971,9.96145535522789,8.36801531911676,18.5301485870208,10.6438094800592,16.3521578557274,7.72092468726324,25.1144003843345,11.4303652203622,15.2679973385795,18.2430598382982,9.19899824795299,10.4419222552494,20.3353935762752,35.5807127077371,46.533631697799,18.752044242129,11.4303548889923,11.143485026483,4.76673050927588,7.17091551872034,17.0240823455211,7.28880880184999,17.0798393167528,16.7733932923669,5.60179863719579,8.89090435659941,7.5192475432191,7.11379909931178,6.33793516927999,13.3563216145264,15.608003841516,10.2684927878001,15.3932140968355,13.8572708399643,9.71237666208789,11.3765153428821,11.432633590274,10.563751288812,11.3658359293342,4.75201142912821,7.17074094907815,6.37112953356618,14.3723628363248,7.74346124188705,14.6388668250198,10.2513722729148,16.6811495934718,20.5346823185343,9.16452159330241,6.4656344401212,2.33206526395521,8.75585294156127,8.05341224406335,4.80145753735044,7.62588716364448,1.54584324027377,6.51408997160564,4.89451363499672,7.60008640257349,3.78650661366172,6.44349290496095,3.71785930683267,3.90510551768276,6.14587799188606,8.30846902321389,14.6878248404106,13.9100521501326,12.6194021971162,13.1731602619963,10.2047921607544,9.99267908677858,10.366105501537,11.3544382894033,3.6497735907583,9.38697193978896,9.64861407289328,6.90674606762403,10.2160944167035,17.3251075600701,8.87301000298829,8.59781919398319,8.43538604592187,7.279402200338,8.06153943141903,7.35538919244399,6.74156540800822,6.67152981426177,6.92544882503503,16.2394200017423,14.0241773803446,5.3504621473082,11.7606969108434,3.80265104465493,7.86261773342101,4.72631925345123,6.62194649121976,4.05861847192275,7.3774158428366,13.1700342490351,12.3641928583382,10.8571290204561,14.9067396705233,7.49359102213747,18.7188261350324,10.1031939417691,10.3178060427818,7.63156512532841,7.79578817909799,7.87075371380238,6.08813287150714,11.8530659693891,3.43394464837949,16.742756413943,28.548520346987,28.5371831594358,12.185398418281,6.88726725615324,3.82792762554443,5.1943943167652,11.3347236020445,12.2682457332868,6.40462209264727,12.6789744979045,3.10992173311158,5.04419836959365,6.312121671319,5.27032522625003,14.1335717456563,9.37739577680376,5.13217338068116,4.11309970813294,3.90445975197093,4.85904935471983,8.63409349459278,7.41132117016576,7.4805051537369,6.46358578788889,7.15312891703765,5.071816515336,12.7650295960738,11.4408180602503,18.5189309468742,22.6958611237245,13.0546867717889,4.71827379071887,1.62786481617433,11.5253647149308,2.28015329005615,5.68627117988073,6.33561498346743,14.4690900988601,13.0730018790044,15.4958136332188,13.378615870531,17.0767411086923,10.5416969741516,8.14724508671381,2.29723871668228,9.98458335285029,7.38384664004654,8.83548186966649,10.5645968311538,7.50970464756633,17.1416761375677,19.6221093122161,19.1231124056825,6.35236560556159,11.712586847186,6.18631050222156,13.5688174920822,12.1208362814101,25.4662388142042,8.97484377612075,36.0541496689351,6.13457458595699,10.5035809422532,10.30807090059,7.27898015357825,7.67244651827796,8.51593041183247,12.0655657442495,9.32932909155929,18.1926003244788,10.3473071292505,5.97803038681893,15.3026409889614,7.29822361531896,10.9648648179135,9.60801586670397,14.2669938024792,15.5314224589404,17.8235021531752,6.97193414326397,8.32177197552485,6.04780586659361,16.1270075082205,3.99001130548962,15.7169652882521,12.5576366270587,12.2809739776009,21.715279354387,20.7785293022987,17.7341147873054,18.9991046085046,10.1837673457123,13.5006151587741,14.0614557936551,4.23008073570678,15.8400111539595,16.2983350416537,4.70739237474888,9.46874073634929,9.04758463220026,14.4383876130372,8.70273309279887,14.1182958451834,18.9980992049239,12.1384373226807,20.4720091327614,15.9888082959925,11.2276276373112,20.0495428497376,17.0696255652627,21.0709705019038,12.998689925297,15.7904441696458,17.0144813588856,1.53481913652154,2.61435451024901,7.1806035032589,9.18441007959176,2.60302715731442,6.59462474545423,5.40259842428226,4.70304149547352,14.9309039879005,14.3013254128035,11.2478750890912,7.25030387190915,10.4753059637958,9.3637241582939,12.4052915236078,7.41199689591088,8.84601832876794,12.698767484999,4.36256974669013,5.45440220691228,11.5314040419064,7.14631189969671,16.2864027177435,18.5938219718914,6.61105928344344,25.7903789959422,6.46870518369786,10.6461206063404,23.488190786027,14.4552890901058,15.600612654877,8.93180086463202,9.17500331684305,9.15024930834359,20.4718233049067,7.70290178461057,9.22789418985217,10.9892809627892,6.29553601541602,7.68703683260953,8.48249296888942,15.972416044292,23.7765481759512,15.1653044246033,11.2155759990606,12.9168149504581,20.0735278837835,5.32349654491144,6.36324443791707,20.3414609916437,12.1300375580147,19.2397302819954,10.5228212460903,10.9967351510671,5.24715801637306,12.7833537486504,12.39293992399,18.0285185620635,7.17056761020257,8.74416465016778,11.4134736474,8.51426553769435,9.71095122369255,7.90307743103764,17.0762928194572,13.2975193693094,10.0070997234533,15.4169523373231,7.62236894029258,4.23647103495506,14.6371826708218,13.47771805341,18.6240664485404,10.1078296091062,14.7159806677329,9.1756464857085,22.7858874869665,13.579211201094,9.87269455406866,8.43015304550532,11.3406601820004,21.4143797599453,5.23437948524618,9.62479855263359,3.92064345569651,20.0667429135776,4.03953796334046,7.11418433484141,6.37705090915289,3.39284931435788,5.1706449935739,7.19690181261202,1.94773164164733,1.96558024679421,3.65175486453108,5.48379635205581,0,3.89371088943688,1.92705690124439,1.41259795033733,3.40676990152261,9.27464430840565,4.60861146462687,3.80249383417107,3.67068111766199,3.71237381263877,4.73290495621912,2.46174797895425,1.89318974933188,0,2.81974010175699,12.9126972881672,7.61842532213849,13.3496573924465,8.46969720508836,13.9226711935142,5.01363417949149,6.83018765915069,3.68592842519078,6.95903353436409,14.9109581395144,14.4701316529778,4.28490072989575,17.5234088746235,12.7518712480685,13.2616279454951,10.5811754098796,13.0903913602758,19.6935688737711,9.64222721751603,6.47052128260753,5.19161406559267,6.65044081294933,4.24166644238815,7.18449277040819,23.3387679303737,14.5399911914283,11.6887803683933,59.8841394003583,1.82299432759663,1.92411999991631,7.97499532978273,16.7276368979684,8.64462410995405,7.09163045303809,20.6846023944879,4.08246458736556,4.16699987839901,5.31444831488303,12.7832224942932,1.52581736317083,6.08185929621735,11.2308095202348,12.0661968434685,2.61452312445576,9.75966209950223,8.61842895242527,2.84855139617503,10.1448117930746,4.39812457607883,4.12860013303631,8.29403015302991,12.0908823290458,9.06159119231679,4.08773192782946,5.02336820464079,2.99181027420282,1.35357396370308,1.76456280885966,3.02078856556517,2.65655225813859,0.953619473882272,8.22892451659305,4.57051862845614,3.39247371441458,6.05888191277855,16.9194528283346,9.46495940185729,7.33236173920351,8.00607047437679,9.39085935993422,10.0245071525237,8.15553709066192,2.40773294189637,8.43352004611221,15.5086570833316,6.84826166262314,2.42780379534093,5.91876604274086,9.67925728389311,22.9554571222868,14.9752193719516,1.20258735531594,2.59220478493118,11.2991158360221,7.61281498513647,6.90652420495896,5.97362148864794,12.5228200253109,15.6702380504847,5.72747136505932,26.6539320967107,16.8894860765981,7.33852006616527,12.7269664028996,5.2248418896106,3.80064448848165,5.3375047084586,5.04342885739781,11.5615525965865,12.4289407429293,8.90772510203881,4.17300684576278,13.4851995386022,5.47543871657448,11.863505397227,10.6726497369676,5.59466906829965,10.8067812865579,5.8413664044617,4.80465994013501,3.45731515171559,8.07641481175311,7.30651507312066,10.8723364858891,11.0879017091073,6.52788592872459,5.49006120812886,3.60252173225874,7.39289046016762,12.7746588066972,12.0334323597588,23.9227492394176,3.6306712165393,6.18733144831546,5.0251111720377,4.5926170114768,3.43380838509257,10.2658870423261,3.76227445925667,17.2943944100354,1.16495949527454,5.43603957919843,5.10978321963232,5.52709059604316,5.21665652028169,14.3097931191176,3.97614844904652,10.896272488926,11.0919672440863,11.1406943643759,9.55512777467126,22.047441372047,20.8926527730646,12.392909558237,5.70238968918752,7.25012507152623,7.50100610330473,6.23041985464498,2.33073541132698,11.1310814445278,4.2881719582402,7.94510364438518,8.64513028026149,9.77399283156683,9.50643640321395,9.79762080328227,8.38111340937412,3.85834847521893,10.5640573506961,13.3708267993748,5.71553711344522,6.62534444561107,9.43765581439319,7.9339561045614,4.79043146076122,41.5840863166836,10.0380167813633,4.08731193259131,9.1132592176383,12.4041505452988,35.9653170054259,13.6407710186603,9.57511886655273,12.5124094774979,11.5317351250442,6.73960268879615,5.57383472206668,17.2759505875258,3.54427271986794,7.93170721862761,10.265656317933,2.86704597845036,6.65574309221114,9.56284605297305,2.62862406378839,13.6228644678696,1.36484205787483,3.99651466962954,5.17584803335978,6.55668868129634,13.0428925749743,10.1493265963074,7.24511260526396,6.10286447652875,14.0158223903566,7.79860495432983,3.55924488638614,9.38244280427387,11.0398574347165,10.2588552384635,11.6805568491811,12.5844446059325,5.84744045812686,9.31577741257556,10.3676551960214,6.11435943483388,7.30443086536427,9.91700219381642,8.75851987988229,4.47557806525128,9.45613027853309,8.48543400635659,6.03243887842042,9.55430132876678,7.60052752859992,6.18112269329027,7.40848875285022,7.57109389371906,9.82361135077247,4.93215660162329,3.91491437947817,10.2017666480523,7.87176412701035,6.11841761266169,10.9244193059707,7.41123473186333,10.9642024789354,5.30067437837643,8.10238960737842,4.73038833828603,3.58738126023125,8.63575854327997,2.12701969324168,8.9867983498625,8.96357420661187,26.3072383820459,37.7836060731,5.56936743038901,8.35627889762646,6.55067582411744,25.1984118777212,2.24052632357696,32.720846135555,15.3229307463046,11.0463570151104,9.93144504808056,4.97661808026378,5.62735233736067,4.42081726726395,4.4034463719651,6.00653010056076,4.75251083871271,2.33832412111851,1.23935764259002,11.1728983594649,14.6282001300573,1.49837315502381,12.8091319725675,5.99549104274163,4.593682160298,10.2766760154335,5.6678630530234,9.09912996625762,12.9223309471676,20.1657356977374,14.9379665322711,10.4959169660703,5.71077681036618,29.1498723948046,12.740730121556,11.0057159113007,16.5201702594984,12.9669912458837,11.7361187430217,3.77940822020922,8.42355677511681,18.3551612520203,6.25211208986474,10.4762677792569,6.05956094787358,10.2020699489761,10.0631001081408,5.46754669029693,7.64741147054381,10.7172719227703,27.8957152599292,13.7064441714296,4.96211178389294,4.92439484206938,9.58218207296965,11.249738553444,9.07966049990825,4.85572483389305,9.3341498454032,3.99160665731875,9.4491869795739,10.4607685756825,7.40870089447466,13.088781939007,5.31872283977857,11.7905286005593,5.72999577808752,11.7836692437001,3.92381028639305,9.13158720509496,8.85303123996348,16.7213090760468,13.5090668493881,4.42438112851634,0,2.95559062914385,4.81026818838152,9.11751122317362,6.828739083758,6.91259661814092,9.89522925286638,8.16490805040901,9.03262090447071,3.81048345171836,6.4149923192334,6.82454048461504,5.7332336338646,9.95513343000352,5.10381214799263,12.4356283481915,3.88457302312737,5.74911718394983,2.3196288626764,5.34282092365053,25.9672804442937,14.5234065867799,4.75680363110274,9.48747089127264,6.48649048798032,12.9828045467339,11.4989495580838,5.68254857310289,24.4564994107992,3.67722482630858,26.8671263695854,8.63757255305759,5.64388160621463,13.1023275550854,12.7445336015863,14.6614912048572,9.41085164414227,20.3879958086855,9.2848048074942,11.2926358949021,6.01810250168762,10.9550458236978,12.3856906519226,4.87354582714934,9.15075060720471,18.6976598025015,25.3083400397419,5.81929524566941,15.2517957448368,8.31916131536553,12.9787968637137,11.6073110848273,5.24474745425739,2.28057301820587,20.0917994591704,14.6969572896058,7.90296135999666,7.77193371806363,6.36541065033211,2.67964130156179,7.46252495512901,8.06777367722783,6.18378547512845,5.95161078659351,18.8599616721138,15.8911268597396,3.58821960257963,6.81024593576364,7.27621880249589,6.53150243690884,9.24029912930259,11.5172010654945,9.03699787947722,3.65926392200615,13.4315393208108,3.30854772220918,7.7228912914776,7.81479258327306,2.34640942403454,4.52293343476606,5.2896503181046,8.65483806441166,14.6929869321449,16.9901300920713 | |||
|short_description=p1@VOPP1 | |||
}} |
Revision as of 17:07, 22 January 2014
Short description: | p1@VOPP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_VOPP1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000285279, NM_030796, uc003tqs.2_5end |
EntrezGene: | VOPP1 |
HGNC: | 34518 |
UniProt: | Q96AW1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 2.33e-14 | 136 |
nongranular leukocyte | 1.34e-13 | 115 |
hematopoietic lineage restricted progenitor cell | 1.28e-10 | 120 |
lymphocyte | 7.99e-08 | 53 |
common lymphoid progenitor | 7.99e-08 | 53 |
lymphoid lineage restricted progenitor cell | 1.95e-07 | 52 |
endothelial cell | 5.99e-07 | 36 |
Ontology term | p-value | n |
---|---|---|
lateral plate mesoderm | 1.17e-08 | 203 |
hematopoietic system | 1.54e-08 | 98 |
blood island | 1.54e-08 | 98 |
hemolymphoid system | 4.54e-08 | 108 |
mesoderm | 4.37e-07 | 315 |
mesoderm-derived structure | 4.37e-07 | 315 |
presumptive mesoderm | 4.37e-07 | 315 |
immune system | 7.49e-07 | 93 |