FFCP PHASE1:Hg19::chr7:151038850..151038915,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51667 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17623 | |||
|TSSclassifier=strong | |||
|UniProt=Q9Y5A7,F8WDB6,C9J7X7,B7Z1C8 | |||
|association_with_transcript=0bp_to_ENST00000355851,ENST00000468404,ENST00000470229,ENST00000490215,uc003wjv.2,uc003wjw.2,uc003wjx.2,uc011kvi.1_5end | |||
|coexpression_cluster_id=C61 | |||
|description=CAGE_peak_1_at_NUB1_5end | |||
|id=chr7:151038850..151038915,+ | |||
|ontology_enrichment_celltype=CL:0000738!1.57e-15!140;CL:0000037!8.94e-12!172;CL:0000566!8.94e-12!172;CL:0002032!8.94e-11!165;CL:0000837!8.94e-11!165;CL:0002031!1.36e-10!124;CL:0000988!2.35e-10!182;CL:0002087!2.12e-08!119;CL:0000791!4.79e-08!18;CL:0000789!4.79e-08!18;CL:0002420!4.79e-08!18;CL:0002419!4.79e-08!18;CL:0000790!4.79e-08!18;CL:0000766!7.82e-07!76 | |||
|ontology_enrichment_celltype_v019=CL:0000791;4.41e-08;18!CL:0000789;4.41e-08;18!CL:0002419;4.41e-08;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,6.64e-16,136;CL:0000037,5.42e-12,168;CL:0002032,5.54e-11,161;CL:0000837,5.54e-11,161;CL:0000988,6.02e-11,177;CL:0002031,7.07e-11,120;CL:0002087,1.24e-08,115;CL:0000791,4.79e-08,18;CL:0000789,4.79e-08,18;CL:0002420,4.79e-08,18;CL:0002419,4.79e-08,18;CL:0000790,4.79e-08,18;CL:0000766,3.94e-07,72 | |||
|ontology_enrichment_development_v019=CL:0000790;4.41e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!9.27e-19!115;UBERON:0002390!1.71e-07!102;UBERON:0003061!1.71e-07!102;UBERON:0002193!2.56e-07!112 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.29e-18,114;UBERON:0002390,9.82e-08,98;UBERON:0003061,9.82e-08,98;UBERON:0002193,1.57e-07,108 | |||
|phase1_expression=25.9800082356896,24.1933591996811,29.0366072437701,11.0080628188443,21.9010936269371,29.6595098194125,40.5279805069297,22.7419154433659,22.9843352815858,15.7269719360966,2.09340350391728,18.5675166310646,15.8260186937072,34.2832797699329,18.8896504164912,44.3734596658172,23.5050865929351,25.5608531635581,25.8604383358969,16.1288586080592,10.6080359447012,9.71709636582072,30.054778648761,20.3942893358597,21.4677913707113,20.4787927404509,22.0029579725855,16.8441072011274,62.9382842958246,73.3114150365676,50.4700562010408,14.7107395916628,12.6506485886865,10.7228662948368,62.4385636677231,36.2531542842925,36.4064544775211,35.4557061460402,28.6778559882303,33.636684960957,43.4396020025453,37.8955589242206,43.5302709301775,39.6937191868212,37.7875943688809,46.3335556868729,19.7564681369832,27.9594163854842,19.8212077372866,26.4677000936378,32.5324097291958,41.620872460391,25.1664346937732,29.692295444856,21.6682378550947,22.40083840557,26.7448027056689,33.0343522134274,34.2813959455411,28.8836124368484,30.688182038354,65.9702600373432,61.4348065474626,69.0484095862965,20.6048559426295,17.0215567407342,21.1759564658495,29.396093835039,47.4549455762383,49.0846789033564,35.1131711527354,32.4084319669057,45.8870461789282,80.6995193711618,62.9308727896529,68.7680357267473,42.4602225733751,49.5583746376971,80.8449701086313,46.7420899735648,67.4327535704915,77.6322653499694,38.719173781491,52.9754452924268,45.3649719470413,40.9661013663847,52.8522702887536,58.0499964354028,42.967916731016,50.5648489903743,54.0752320653976,39.3448916878529,48.9309732000293,43.6165384310785,49.3247535423752,37.1371559532859,63.3405459766542,42.0521516141606,49.9611642568807,52.1621865618916,61.9252306603822,56.813736688168,42.8618802497405,47.0152128055432,51.8506397155713,48.7374568083967,73.1170432165542,27.4115424212945,30.5639466765714,35.3541494897904,21.5553013872962,48.1073122320187,52.9383030488556,71.1658602718637,56.4491828546875,42.6043128542849,57.4830740402882,53.2622540498076,97.6656011195281,50.0147700488832,54.0399266700827,35.1667256445898,52.8518667962982,66.1690779668343,59.966748745126,57.0633177426081,59.9423437752364,64.3125510886896,51.8833979820004,55.9022198987604,48.7613732627923,24.1452309493309,31.1984650898214,49.5171638766856,29.0775988168816,43.5988022072079,53.2841584524236,38.9307896242109,36.8685786939865,23.2815867335692,26.3504357079378,30.3871455154693,6.19301990097322,7.41568885568859,48.6821090482025,52.9354401389772,58.3685446677818,52.2294467228699,65.2074198289346,40.8603251462521,28.2242618460721,12.9035189265919,21.5227110996708,15.2633144319483,20.5554723742854,17.0573186002842,23.6164312186596,33.8525954511821,33.086262429864,34.476223114761,30.212198783186,15.2054421143703,36.3652465746773,26.1040787045567,15.3926970097534,39.7383790864155,35.9246996201872,35.0221704303132,22.9974956198825,15.1882505530901,20.1521918323448,146.27626335403,158.989908300813,14.8271977728462,38.2668402805395,38.6223060576968,38.5310716166467,22.0864197976587,31.2108176334554,24.1091368061192,25.6197589751292,23.9267521964645,34.2332138939743,25.7297383653104,18.3077331487074,28.4551963972471,33.4182036198399,19.9173217058727,19.3539247634799,30.2350065418558,22.8656481244256,22.4299892409591,21.6909745453296,21.0676210053373,36.9519049971357,18.3023132794534,35.4407429432875,41.5801000048719,27.4466291499198,10.0117749813183,2.87447256726495,30.63717273964,23.3971632160573,36.8495273593963,30.2894558407778,22.3736090933284,29.7471356635062,32.441604383766,20.809197739908,40.1487890978907,30.3062618658173,18.6056479572329,46.0644805695822,40.4495647871638,40.5734746802866,29.8734108067041,35.3696328735151,32.3115231032467,34.7028117881469,48.3321709888248,25.2056810686796,31.8376630399343,31.8773913543717,29.1823888276578,23.1834202502209,37.5714019959595,26.4682942301222,25.8433048226896,26.2598310885112,22.8054321033815,21.4472723244284,15.3290490811849,39.112383082454,34.7350106624158,17.9575397758225,36.6850663145263,25.9876613401051,36.9117216124313,35.0656155362452,30.1263787354352,31.3234882559999,38.7825410484483,34.404239771109,40.98871768069,35.9085281179383,39.6289571654782,7.38155454624648,4.20725321410337,16.0513864419246,10.2906097969879,32.956309053676,22.6050259835854,39.5829237476541,20.7487656724886,45.9976760151245,32.0831805258243,20.4135530860044,16.8602629886429,19.603149620268,24.5359379670103,18.2452650973782,12.4792174233549,20.2063878835383,31.0693485333206,50.2509211329317,48.940225791004,33.334956905516,47.5635380586496,18.9649055510226,10.3018339451385,33.7317298339734,31.1225672635186,25.5645599136613,17.8094284574876,34.7723005371639,34.4513486298999,35.8234090811393,31.3884653595079,14.9519244874432,69.958179781224,61.0175647711657,67.7962937818325,74.798255823403,70.9482475856255,27.050102968464,14.1335717456563,9.37739577680376,18.8179690624976,20.668326033368,16.5188681814155,26.5818582346438,28.2570332550309,29.645284680663,30.4353886156943,24.6908977097356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| |||
|short_description=p1@NUB1 | |||
}} |
Revision as of 20:09, 22 January 2014
Short description: | p1@NUB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NUB1_5end |
Coexpression cluster: | C61_migratory_Dendritic_immature_Macrophage_xeroderma_cord_b |
Association with transcript: | 0bp_to_ENST00000355851, ENST00000468404, ENST00000470229, ENST00000490215, uc003wjv.2, uc003wjw.2, uc003wjx.2, uc011kvi.1_5end |
EntrezGene: | NUB1 |
HGNC: | 17623 |
UniProt: | Q9Y5A7F8WDB6C9J7X7B7Z1C8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 6.64e-16 | 136 |
hematopoietic stem cell | 5.42e-12 | 168 |
hematopoietic oligopotent progenitor cell | 5.54e-11 | 161 |
hematopoietic multipotent progenitor cell | 5.54e-11 | 161 |
hematopoietic cell | 6.02e-11 | 177 |
hematopoietic lineage restricted progenitor cell | 7.07e-11 | 120 |
nongranular leukocyte | 1.24e-08 | 115 |
mature alpha-beta T cell | 4.79e-08 | 18 |
alpha-beta T cell | 4.79e-08 | 18 |
immature T cell | 4.79e-08 | 18 |
mature T cell | 4.79e-08 | 18 |
immature alpha-beta T cell | 4.79e-08 | 18 |
myeloid leukocyte | 3.94e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.29e-18 | 114 |
hematopoietic system | 9.82e-08 | 98 |
blood island | 9.82e-08 | 98 |
hemolymphoid system | 1.57e-07 | 108 |