FFCP PHASE1:Hg19::chrX:106198807..106198826,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C53 | |||
|description=CAGE_peak_at_chrX:106198807..106198826,- | |||
|id=chrX:106198807..106198826,- | |||
|ontology_enrichment_celltype=CL:0000064!8.92e-29!3;CL:0005012!8.92e-29!3;CL:0000067!8.92e-29!3;CL:0002304!8.92e-29!3;CL:0000075!6.21e-12!27;CL:0000342!7.40e-11!1;CL:0002565!7.40e-11!1;CL:0002379!1.73e-10!1;CL:0000306!3.97e-10!4;CL:0002222!3.97e-10!4;CL:0002224!3.97e-10!4;CL:0002594!5.97e-10!4;CL:0000710!1.15e-07!20;CL:0000133!9.56e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000064;2.59e-117;3!CL:0000067;2.59e-117;3!CL:0005012;2.59e-117;3!CL:0002304;2.59e-117;3!CL:0000342;9.91e-41;1!CL:0002565;9.91e-41;1!CL:0000710;1.60e-18;20!CL:0000075;5.92e-14;27!CL:0002077;2.28e-11;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,2.59e-117,3;CL:0000067,2.59e-117,3;CL:0005012,2.59e-117,3;CL:0002304,2.59e-117,3;CL:0000342,9.91e-41,1;CL:0002565,9.91e-41,1;CL:0000710,1.60e-18,20;CL:0000075,5.92e-14,27;CL:0002077,2.96e-11,34;CL:0000133,4.65e-11,59;CL:0000221,3.13e-09,72 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3620!1.73e-10!1;DOID:3565!1.73e-10!1;DOID:5662!2.74e-10!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000488!7.81e-38!4;UBERON:0007625!4.66e-30!11;UBERON:0001778!8.92e-29!3;UBERON:0001775!8.92e-29!3;UBERON:0002203!2.43e-25!6;UBERON:0001768!2.43e-25!6;UBERON:0001801!1.52e-23!14;UBERON:0000019!3.00e-17!19;UBERON:0000047!3.00e-17!19;UBERON:0004088!3.00e-17!19;UBERON:0003072!3.00e-17!19;UBERON:0003071!3.00e-17!19;UBERON:0004128!3.00e-17!19;UBERON:0000970!2.29e-16!20;UBERON:0002104!1.44e-15!21;UBERON:0001456!1.44e-15!21;UBERON:0000020!3.55e-14!23;UBERON:0002200!6.15e-14!11;UBERON:0006876!6.15e-14!11;UBERON:0001032!1.44e-13!24;UBERON:0004456!1.44e-13!24;UBERON:0006947!3.36e-13!3;UBERON:0004054!3.36e-13!3;UBERON:0005085!3.77e-11!29;UBERON:0002506!7.40e-11!1;UBERON:0001769!7.40e-11!1;UBERON:0000998!1.19e-10!1;UBERON:0006868!1.19e-10!1;UBERON:0001000!2.08e-10!1;UBERON:0005352!2.08e-10!1;UBERON:0004913!3.29e-10!1;UBERON:0003703!3.29e-10!1;UBERON:0001174!3.29e-10!1;UBERON:0004914!3.29e-10!1;UBERON:0010077!3.97e-10!4;UBERON:0005389!3.97e-10!4;UBERON:0005904!3.97e-10!4;UBERON:0000484!3.97e-10!4;UBERON:0002546!3.97e-10!4;UBERON:0000965!3.97e-10!4;UBERON:0001803!3.97e-10!4;UBERON:0003073!3.97e-10!4;UBERON:0005426!3.97e-10!4;UBERON:0001310!5.97e-10!4;UBERON:0002394!9.79e-10!4;UBERON:0003928!9.79e-10!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0000488;3.35e-156;4!UBERON:0001778;2.59e-117;3!UBERON:0001775;2.59e-117;3!UBERON:0002203;1.51e-104;6!UBERON:0001768;1.51e-104;6!UBERON:0002200;1.51e-104;6!UBERON:0007625;1.55e-57;11!UBERON:0006876;1.55e-57;11!UBERON:0001801;1.98e-45;14!UBERON:0002506;9.91e-41;1!UBERON:0001769;9.91e-41;1!UBERON:0000019;9.88e-34;19!UBERON:0000047;9.88e-34;19!UBERON:0004088;9.88e-34;19!UBERON:0010230;9.88e-34;19!UBERON:0000970;4.31e-32;20!UBERON:0002104;1.31e-30;21!UBERON:0001456;1.31e-30;21!UBERON:0000020;5.02e-28;23!UBERON:0001032;6.78e-27;24!UBERON:0004456;6.78e-27;24!UBERON:0010371;8.68e-21;31!UBERON:0001444;2.79e-11;48!UBERON:0000033;5.73e-09;50!UBERON:0002049;6.13e-08;75!UBERON:0007798;6.13e-08;75!UBERON:0007811;8.71e-08;52!UBERON:0000153;1.99e-07;54 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000488,3.35e-156,4;UBERON:0001778,2.59e-117,3;UBERON:0001775,2.59e-117,3;UBERON:0002203,1.51e-104,6;UBERON:0001768,1.51e-104,6;UBERON:0002200,1.51e-104,6;UBERON:0007625,1.55e-57,11;UBERON:0006876,1.55e-57,11;UBERON:0001801,1.98e-45,14;UBERON:0002506,9.91e-41,1;UBERON:0001769,9.91e-41,1;UBERON:0000019,4.31e-32,20;UBERON:0000047,4.31e-32,20;UBERON:0010312,4.31e-32,20;UBERON:0004088,4.31e-32,20;UBERON:0010230,4.31e-32,20;UBERON:0003072,4.31e-32,20;UBERON:0004128,4.31e-32,20;UBERON:0003071,4.31e-32,20;UBERON:0000970,1.31e-30,21;UBERON:0002104,1.31e-30,21;UBERON:0001456,2.94e-29,22;UBERON:0000020,6.78e-27,24;UBERON:0001032,6.78e-27,24;UBERON:0004456,6.78e-27,24;UBERON:0005085,5.13e-21,31;UBERON:0001444,1.40e-13,49;UBERON:0000033,5.68e-12,56;UBERON:0000153,7.02e-11,62;UBERON:0007811,7.02e-11,62;UBERON:0003056,7.02e-11,61;UBERON:0002049,8.84e-09,78;UBERON:0007798,8.84e-09,78;UBERON:0003075,2.75e-08,82;UBERON:0007284,2.75e-08,82;UBERON:0002346,6.20e-08,86 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.85870796139317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.79616152611729,1.33037638477538,1.75669571386252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.28919525746314,0,0,0,0,0,0,0,0.463721619900307,0.821860859650752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0.281695602532241,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.36403720706662,0,0,0,0.470531639396343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0,0,0,0,0,0,0,0,0.647782773655864,0,0,0,0,0,0,0,0,0,0,0,0,0.846774100381858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chrX:106198807..106198826,- | |||
}} |
Revision as of 06:31, 23 January 2014
Short description: | p@chrX:106198807..106198826, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chrX:106198807..106198826, - |
Coexpression cluster: | C53_medulloblastoma_pineal_retinoblastoma_small_retina_eye_pituitary |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 2.59e-117 | 3 |
ciliated epithelial cell | 2.59e-117 | 3 |
multi-ciliated epithelial cell | 2.59e-117 | 3 |
non-pigmented ciliary epithelial cell | 2.59e-117 | 3 |
pigment cell (sensu Vertebrata) | 9.91e-41 | 1 |
iris pigment epithelial cell | 9.91e-41 | 1 |
neurecto-epithelial cell | 1.60e-18 | 20 |
columnar/cuboidal epithelial cell | 5.92e-14 | 27 |
ecto-epithelial cell | 2.96e-11 | 34 |
neurectodermal cell | 4.65e-11 | 59 |
ectodermal cell | 3.13e-09 | 72 |
Ontology term | p-value | n |
---|---|---|
atypical epithelium | 3.35e-156 | 4 |
ciliary epithelium | 2.59e-117 | 3 |
ciliary body | 2.59e-117 | 3 |
vasculature of eye | 1.51e-104 | 6 |
uvea | 1.51e-104 | 6 |
vasculature of head | 1.51e-104 | 6 |
pigment epithelium of eye | 1.55e-57 | 11 |
vasculature of organ | 1.55e-57 | 11 |
anterior segment of eyeball | 1.98e-45 | 14 |
iris epithelium | 9.91e-41 | 1 |
iris | 9.91e-41 | 1 |
camera-type eye | 4.31e-32 | 20 |
simple eye | 4.31e-32 | 20 |
immature eye | 4.31e-32 | 20 |
ocular region | 4.31e-32 | 20 |
eyeball of camera-type eye | 4.31e-32 | 20 |
optic cup | 4.31e-32 | 20 |
optic vesicle | 4.31e-32 | 20 |
eye primordium | 4.31e-32 | 20 |
eye | 1.31e-30 | 21 |
visual system | 1.31e-30 | 21 |
face | 2.94e-29 | 22 |
sense organ | 6.78e-27 | 24 |
sensory system | 6.78e-27 | 24 |
entire sense organ system | 6.78e-27 | 24 |
ectodermal placode | 5.13e-21 | 31 |
subdivision of head | 1.40e-13 | 49 |
head | 5.68e-12 | 56 |
anterior region of body | 7.02e-11 | 62 |
craniocervical region | 7.02e-11 | 62 |
pre-chordal neural plate | 7.02e-11 | 61 |
vasculature | 8.84e-09 | 78 |
vascular system | 8.84e-09 | 78 |
neural plate | 2.75e-08 | 82 |
presumptive neural plate | 2.75e-08 | 82 |
neurectoderm | 6.20e-08 | 86 |