FFCP PHASE1:Hg19::chrX:132549542..132549554,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2239 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4452 | |||
|TSSclassifier=strong | |||
|UniProt=O75487 | |||
|association_with_transcript=-24bp_to_ENST00000370828_5end | |||
|description=CAGE_peak_3_at_GPC4_5end | |||
|id=chrX:132549542..132549554,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!1.43e-12!659;UBERON:0000475!2.47e-09!365;UBERON:0004121!5.56e-09!169;UBERON:0000924!7.42e-09!173;UBERON:0006601!7.42e-09!173;UBERON:0000062!1.39e-08!511;UBERON:0000922!1.60e-08!612;UBERON:0000033!2.77e-08!123;UBERON:0000153!4.14e-08!129;UBERON:0007811!4.14e-08!129;UBERON:0000064!1.18e-07!219;UBERON:0000467!1.61e-07!625;UBERON:0000480!2.41e-07!626;UBERON:0002553!7.52e-07!70;UBERON:0007023!8.44e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0006554;3.72e-07;30!UBERON:0001008;3.72e-07;30 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001008,8.98e-07,48;UBERON:0004121,9.18e-07,171;UBERON:0000924,9.18e-07,171;UBERON:0006601,9.18e-07,171 | |||
|phase1_expression=6.54042165374004,7.70761886007539,3.38290569830331,12.0087958023756,4.02264984984559,2.61701557230111,5.06599756336621,5.68547886084148,4.17897005119742,1.72013755551056,2.09340350391728,15.2908960491121,16.881086606621,0.74259811776028,0.331397375727916,0.672325146451775,0.602694528023977,0,0,8.24911089114479,5.71201935483908,17.5534644027729,10.8769675109802,10.1287074553934,16.1950005077296,1.14620108621927,1.39571002064908,1.49550484495991,0,0,0.309632246632152,0,0,0.369754010166788,0,0,0,0,0.802177789880567,0.217010870715852,0,0,0,1.16318591023652,0,0,0.232429036905685,0.411167888021826,0,0,0.256160706529101,0.709446689665756,0.344745680736619,0.645484683583826,0,0.752969358170419,0,0.224723484445085,0.612167784741805,0,0,0.329851300186716,0.199463657621632,0,0.580418477257168,1.13477044938228,0.622822248995575,0.251248665256743,0,0.217188844705117,1.81619850790011,0,0,0,0,0,0,0.150176892841506,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,2.42938867502708,0,1.50401373190767,0.434539556882471,1.5905718941022,0.486634870302636,5.2939497611878,7.31707011626461,8.16863506946072,4.78073625566651,1.09288586487763,0.370784442784429,0,0.696518949197069,0.930705723632056,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0.805658634218294,0,0.488124115096339,0,0,0,0,0,0,0,0,0,0,1.3082821564276,0.496971951695318,1.13967460498122,0.264818361626438,1.72101972449288,0.354668382198357,2.80338800071154,1.06748995729705,0.49333509683432,2.8008993185979,0,0.163461903113459,4.54072282934794,2.88087962239999,0.937285727335186,0.624320153660641,0,1.34503812496621,0.704606991862589,0.809364721840658,0.561803226808994,0.61246251376468,1.10550885580591,2.06651562351531,0,1.97813543422845,0.910161361938026,0,0.841680569770331,1.87677779807946,0.831192346452549,2.19488810440419,0.30648779579902,0.600952235626387,1.13432183160021,1.97328599257748,1.70845911054854,1.90738711043606,0,0,2.06112432036503,1.48893485065272,4.72573730275545,2.53336213419116,0.504867548488229,1.10459878370759,0,8.87523981291536,1.30977727695932,0.67824236924195,0.966304265816484,1.90922284413584,1.43402297694502,59.0352737667242,71.6986046619235,44.9670558905036,25.6042805887965,47.6886408154938,45.6221698844787,0,1.92972281457866,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,1.6462960453256,2.94017422771084,0,0,0,0,0,2.74508496477641,4.7192622725709,0,0.201057944823262,3.14800713539001,0.325808305310325,0,4.3299402607582,4.05756417412769,17.14166935843,1.15493158208859,1.85194205030644,0,2.37061319387782,0.858486162094873,0.492434012174795,10.7641961964049,5.94524649154913,0.93733833986777,4.36753533317035,2.69372684760534,0.806026704325635,0.871901815541886,1.53353071666084,0,0,0,0.144119953416961,0,0.126995788584338,0.381988425558278,0,1.71072446022705,0,0,0,2.24262168690721,5.23152082599936,1.24675085895615,0.129271715757778,0,0.845302752556,2.6593811658487,2.08014873822732,0.257207374262142,1.41849132023278,0.532844358032199,0.142977993658148,0.542621605391443,0,0.65147236858747,0.355391948742546,0,1.20575750823834,0,0.499864955910285,1.2162378064119,0,4.21667878966063,0.479249710983165,1.14861935834114,7.13184525203592,1.44781306667579,2.67119219315498,1.96967059563885,0,0,0,0,2.7950408664471,2.60279707715243,0,1.17261385734044,2.55175500661265,0,0,0,1.71768088406796,1.50051156317903,1.89885516589815,0.415941723061614,0.178428988797162,0,0,3.61135319673263,4.5481500811197,2.0694614258501,0.664225598535437,1.47495334833363,0.0868836144680828,1.76221041716467,2.40200396667599,0,0,0,2.42502057157008,1.66435439510497,13.0027826131763,9.42809669711352,16.2669691685346,12.3490441550552,7.43207065683066,20.4682899626681,5.95159508231348,1.48418066444991,0.308419387605311,1.59805552781814,0.164254312027618,0,0.929683027679674,0.120859449591622,9.02279116364782,0.460404944679482,0,0,0.262248829918848,8.57279264524082,5.62211960862228,4.70609861506113,2.92278449306521,5.80533958910816,0,0,3.02282282542995,3.08454505380579,2.16757150035082,8.52872615553251,3.56826782263054,0.831076008928724,4.47749509444357,0,0,1.02580050046556,3.60816110269676,0.976135183992909,1.75169719801128,7.32555718546747,7.5908739926941,6.89118645595407,3.25030123018261,0,1.35339005608971,1.69453478826109,2.30255512089194,0.964856007391714,3.11518710117994,5.22060098091223,1.10794615640931,3.47224939022276,3.14041339185858,7.30322255987403,1.02090169995667,3.0347334256665,0,0,0,0,0,0,0,0,2.60510858551767,0,0,0.511795582622668,0.855877976067841,0.318203247925937,0.78494864019923,1.79872457583315,0.54907405947211,0.706874414074119,0.202182481573316,0,0,0.48763373908959,0,0,0,0,0,0,0.66343897524122,0.438450885253763,1.73632660280006,3.27947376023316,0,0,0.281695602532241,0.860468113224309,0.392996164052485,0.7133421029625,0,1.26664581178598,0.658589785919804,0.379473173765715,0,0.673554789078584,0.670302275535787,0,1.60044461320525,7.74909670808214,1.68471475667626,8.42517291719684,8.729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| |||
|short_description=p3@GPC4 | |||
}} |
Revision as of 06:59, 23 January 2014
Short description: | p3@GPC4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_GPC4_5end |
Coexpression cluster: | NA |
Association with transcript: | -24bp_to_ENST00000370828_5end |
EntrezGene: | GPC4 |
HGNC: | 4452 |
UniProt: | O75487 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
renal system | 8.98e-07 | 48 |
ectoderm-derived structure | 9.18e-07 | 171 |
ectoderm | 9.18e-07 | 171 |
presumptive ectoderm | 9.18e-07 | 171 |