DOID:3371: Difference between revisions
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|located_in= | |located_in= | ||
|name=chondrosarcoma | |name=chondrosarcoma | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date= | |obo_creation_date= | ||
|part_of= | |part_of= |
Latest revision as of 16:50, 12 September 2014
Name: | chondrosarcoma | ||
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Namespace: | FANTOM | ||
Xrefs: |
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Synonyms: |
"chondrosarcoma" EXACT [NCI2004_11_17:C2946] "chondrosarcoma (morphologic abnormality)" EXACT [SNOMEDCT_2005_07_31:14990007] "chondrosarcoma NOS (morphologic abnormality)" EXACT [SNOMEDCT_2005_07_31:189886003] "chondrosarcoma of bone" EXACT [SNOMEDCT_2005_07_31:134336003] "primary chondrosarcoma of bone" EXACT [] "primary chondrosarcoma of the bone" EXACT [NCI2004_11_17:C7155] | ||
Comments: | OMIM mapping confirmed by DO. [SN]. | ||
Alt_id: | DOID:3370 |
Ontology association<br>Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | DOID:201(connective tissue cancer) |
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Children
is a: | FF:10720-109I9 (),DOID:4549 (extraosseous chondrosarcoma),DOID:5861 (myxoid chondrosarcoma) |
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Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples
Human (Homo sapiens)
- 10410-106B5 (extraskeletal myxoid chondrosarcoma cell line:H-EMC-SS)
- 10720-109I9
Mouse (Mus musculus)
- 10410-106B5 (extraskeletal myxoid chondrosarcoma cell line:H-EMC-SS)
- 10720-109I9
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with DOID:3371 (chondrosarcoma), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
P-value | FFCP | Short description |
---|---|---|
5.42e-195 | FFCP PHASE2:Hg19::chr12:71031325..71031332,-#_a94794a00b78c9028f3bf3b1af3efa58 | p19@PTPRB |
5.42e-195 | FFCP PHASE2:Hg19::chr20:36848135..36848142,-#_a94794a00b78c9028f3bf3b1af3efa58 | p@chr20:36848135..36848142, - |
5.42e-195 | FFCP PHASE2:Hg19::chr9:13006722..13006729,-#_a94794a00b78c9028f3bf3b1af3efa58 | p@chr9:13006722..13006729, - |
5.42e-195 | FFCP PHASE2:Hg19::chr4:139817573..139817580,-#_a94794a00b78c9028f3bf3b1af3efa58 | p@chr4:139817573..139817580, - |
5.42e-195 | FFCP PHASE2:Hg19::chr15:95751475..95751482,+#_a94794a00b78c9028f3bf3b1af3efa58 | p@chr15:95751475..95751482, + |
5.42e-195 | FFCP PHASE1:Hg19::chr14:88220703..88220709,-#_a94794a00b78c9028f3bf3b1af3efa58 | p@chr14:88220703..88220709, - |
5.42e-195 | FFCP PHASE2:Hg19::chr6:150735014..150735021,-#_a94794a00b78c9028f3bf3b1af3efa58 | p@chr6:150735014..150735021, - |
5.42e-195 | FFCP PHASE2:Hg19::chr1:154942206..154942211,-#_a94794a00b78c9028f3bf3b1af3efa58 | p@chr1:154942206..154942211, - |
5.42e-195 | FFCP PHASE2:Hg19::chr12:70636933..70636940,+#_a94794a00b78c9028f3bf3b1af3efa58 | p28@CNOT2 |
5.42e-195 | FFCP PHASE1:Hg19::chr7:94540075..94540082,+#_a94794a00b78c9028f3bf3b1af3efa58 | p21@PPP1R9A |
5.42e-195 | FFCP PHASE1:Hg19::chr1:198595872..198595878,+#_a94794a00b78c9028f3bf3b1af3efa58 | p@chr1:198595872..198595878, + |
5.42e-195 | FFCP PHASE1:Hg19::chr13:23368370..23368374,+#_a94794a00b78c9028f3bf3b1af3efa58 | p@chr13:23368370..23368374, + |
5.42e-195 | FFCP PHASE1:Hg19::chr15:95751475..95751482,+#_a94794a00b78c9028f3bf3b1af3efa58 | p@chr15:95751475..95751482, + |
5.42e-195 | FFCP PHASE2:Hg19::chrX:135338329..135338337,-#_a94794a00b78c9028f3bf3b1af3efa58 | p@chrX:135338329..135338337, - |
5.42e-195 | FFCP PHASE2:Hg19::chr7:79999046..79999051,+#_a94794a00b78c9028f3bf3b1af3efa58 | p41@CD36 |
5.42e-195 | FFCP PHASE2:Hg19::chr3:1577628..1577634,-#_a94794a00b78c9028f3bf3b1af3efa58 | p@chr3:1577628..1577634, - |
5.42e-195 | FFCP PHASE2:Hg19::chr1:197873492..197873502,-#_a94794a00b78c9028f3bf3b1af3efa58 | p@chr1:197873492..197873502, - |
5.42e-195 | FFCP PHASE1:Hg19::chr3:30442082..30442087,-#_a94794a00b78c9028f3bf3b1af3efa58 | p@chr3:30442082..30442087, - |
5.42e-195 | FFCP PHASE1:Hg19::chr1:158989981..158989988,+#_a94794a00b78c9028f3bf3b1af3efa58 | p@chr1:158989981..158989988, + |
5.42e-195 | FFCP PHASE1:Hg19::chr12:80818259..80818266,+#_a94794a00b78c9028f3bf3b1af3efa58 | p@chr12:80818259..80818266, + |
5.42e-195 | FFCP PHASE1:Hg19::chr10:54786954..54786965,-#_a94794a00b78c9028f3bf3b1af3efa58 | p@chr10:54786954..54786965, - |
5.42e-195 | FFCP PHASE2:Hg19::chr3:2141746..2141758,-#_a94794a00b78c9028f3bf3b1af3efa58 | p@chr3:2141746..2141758, - |
5.42e-195 | FFCP PHASE1:Hg19::chr9:13005000..13005036,-#_a94794a00b78c9028f3bf3b1af3efa58 | p@chr9:13005000..13005036, - |
5.42e-195 | FFCP PHASE1:Hg19::chr19:56047669..56047674,-#_a94794a00b78c9028f3bf3b1af3efa58 | p7@SBK2 |
5.42e-195 | FFCP PHASE2:Hg19::chr7:18439468..18439477,+#_a94794a00b78c9028f3bf3b1af3efa58 | p@chr7:18439468..18439477, + |
5.42e-195 | FFCP PHASE2:Hg19::chr3:157221979..157222025,-#_a94794a00b78c9028f3bf3b1af3efa58 | p@chr3:157221979..157222025, - |
5.42e-195 | FFCP PHASE1:Hg19::chr12:71031372..71031377,-#_a94794a00b78c9028f3bf3b1af3efa58 | p25@PTPRB |
5.42e-195 | FFCP PHASE2:Hg19::chr17:46178195..46178202,-#_a94794a00b78c9028f3bf3b1af3efa58 | p12@CBX1 |
5.42e-195 | FFCP PHASE2:Hg19::chr14:88338702..88338713,-#_a94794a00b78c9028f3bf3b1af3efa58 | p1@ENST00000554305 |
5.42e-195 | FFCP PHASE1:Hg19::chrX:135338270..135338275,-#_a94794a00b78c9028f3bf3b1af3efa58 | p@chrX:135338270..135338275, - |
5.42e-195 | FFCP PHASE1:Hg19::chr6:152590257..152590288,-#_a94794a00b78c9028f3bf3b1af3efa58 | p@chr6:152590257..152590288, - |
5.42e-195 | FFCP PHASE2:Hg19::chr9:18504821..18504825,+#_a94794a00b78c9028f3bf3b1af3efa58 | p@chr9:18504821..18504825, + |
5.42e-195 | FFCP PHASE2:Hg19::chr3:2140149..2140157,+#_a94794a00b78c9028f3bf3b1af3efa58 | p25@CNTN4 |
5.42e-195 | FFCP PHASE2:Hg19::chr1:228783266..228783269,-#_a94794a00b78c9028f3bf3b1af3efa58 | p@chr1:228783266..228783269, - |
5.42e-195 | FFCP PHASE2:Hg19::chr13:23733478..23733489,-#_a94794a00b78c9028f3bf3b1af3efa58 | p@chr13:23733478..23733489, - |
5.42e-195 | FFCP PHASE1:Hg19::chr3:1577586..1577600,-#_a94794a00b78c9028f3bf3b1af3efa58 | p@chr3:1577586..1577600, - |
5.42e-195 | FFCP PHASE2:Hg19::chr2:74780643..74780673,-#_a94794a00b78c9028f3bf3b1af3efa58 | p30@LOXL3 |
5.42e-195 | FFCP PHASE2:Hg19::chr11:30253410..30253431,+#_a94794a00b78c9028f3bf3b1af3efa58 | p2@FSHB |
5.42e-195 | FFCP PHASE1:Hg19::chr21:17357327..17357329,-#_a94794a00b78c9028f3bf3b1af3efa58 | p@chr21:17357327..17357329, - |
5.42e-195 | FFCP PHASE2:Hg19::chr6:152589291..152589303,-#_a94794a00b78c9028f3bf3b1af3efa58 | p38@SYNE1 |
5.42e-195 | FFCP PHASE2:Hg19::chr5:109694595..109694599,+#_a94794a00b78c9028f3bf3b1af3efa58 | p@chr5:109694595..109694599, + |
5.42e-195 | FFCP PHASE1:Hg19::chr13:23733478..23733489,-#_a94794a00b78c9028f3bf3b1af3efa58 | p@chr13:23733478..23733489, - |
5.42e-195 | FFCP PHASE2:Hg19::chr1:172009977..172009985,+#_a94794a00b78c9028f3bf3b1af3efa58 | p@chr1:172009977..172009985, + |
5.42e-195 | FFCP PHASE2:Hg19::chr12:108955070..108955084,-#_a94794a00b78c9028f3bf3b1af3efa58 | p16@SART3 |
5.42e-195 | FFCP PHASE1:Hg19::chr3:2141785..2141802,-#_a94794a00b78c9028f3bf3b1af3efa58 | p@chr3:2141785..2141802, - |
5.42e-195 | FFCP PHASE2:Hg19::chr2:53436150..53436154,-#_a94794a00b78c9028f3bf3b1af3efa58 | p@chr2:53436150..53436154, - |
5.42e-195 | FFCP PHASE2:Hg19::chr21:38309134..38309135,-#_a94794a00b78c9028f3bf3b1af3efa58 | p@chr21:38309134..38309135, - |
5.42e-195 | FFCP PHASE1:Hg19::chr6:96913362..96913393,-#_a94794a00b78c9028f3bf3b1af3efa58 | p@chr6:96913362..96913393, - |
5.42e-195 | FFCP PHASE1:Hg19::chr5:39548606..39548614,-#_a94794a00b78c9028f3bf3b1af3efa58 | p@chr5:39548606..39548614, - |
5.42e-195 | FFCP PHASE1:Hg19::chr14:88338702..88338713,-#_a94794a00b78c9028f3bf3b1af3efa58 | p1@ENST00000554305 |
5.42e-195 | FFCP PHASE2:Hg19::chr1:43637641..43637648,-#_a94794a00b78c9028f3bf3b1af3efa58 | p16@EBNA1BP2 |
5.42e-195 | FFCP PHASE2:Hg19::chr5:128083931..128083952,+#_a94794a00b78c9028f3bf3b1af3efa58 | p@chr5:128083931..128083952, + |
5.42e-195 | FFCP PHASE2:Hg19::chr3:170537826..170537835,+#_a94794a00b78c9028f3bf3b1af3efa58 | p@chr3:170537826..170537835, + |
5.42e-195 | FFCP PHASE2:Hg19::chrX:591202..591211,-#_a94794a00b78c9028f3bf3b1af3efa58 | p@chrX:591202..591211, - |
5.42e-195 | FFCP PHASE1:Hg19::chr10:63700017..63700022,+#_a94794a00b78c9028f3bf3b1af3efa58 | p@chr10:63700017..63700022, + |
5.42e-195 | FFCP PHASE2:Hg19::chr12:80818234..80818245,+#_a94794a00b78c9028f3bf3b1af3efa58 | p@chr12:80818234..80818245, + |
5.42e-195 | FFCP PHASE1:Hg19::chr4:145101707..145101712,+#_a94794a00b78c9028f3bf3b1af3efa58 | p@chr4:145101707..145101712, + |
5.42e-195 | FFCP PHASE2:Hg19::chr18:74535888..74535894,-#_a94794a00b78c9028f3bf3b1af3efa58 | p@chr18:74535888..74535894, - |
5.42e-195 | FFCP PHASE2:Hg19::chr6:152589452..152589462,-#_a94794a00b78c9028f3bf3b1af3efa58 | p43@SYNE1 |
5.42e-195 | FFCP PHASE1:Hg19::chr6:142993137..142993142,+#_a94794a00b78c9028f3bf3b1af3efa58 | p@chr6:142993137..142993142, + |
5.42e-195 | FFCP PHASE2:Hg19::chr3:157231406..157231414,-#_a94794a00b78c9028f3bf3b1af3efa58 | p@chr3:157231406..157231414, - |
5.42e-195 | FFCP PHASE2:Hg19::chr1:192444852..192444861,+#_a94794a00b78c9028f3bf3b1af3efa58 | p@chr1:192444852..192444861, + |
5.42e-195 | FFCP PHASE2:Hg19::chr12:95941674..95941679,+#_a94794a00b78c9028f3bf3b1af3efa58 | p@chr12:95941674..95941679, + |
5.42e-195 | FFCP PHASE2:Hg19::chr12:46660412..46660420,-#_a94794a00b78c9028f3bf3b1af3efa58 | p38@SLC38A1 |
5.42e-195 | FFCP PHASE2:Hg19::chr10:63700076..63700086,+#_a94794a00b78c9028f3bf3b1af3efa58 | p@chr10:63700076..63700086, + |
5.42e-195 | FFCP PHASE1:Hg19::chr5:128083909..128083918,+#_a94794a00b78c9028f3bf3b1af3efa58 | p@chr5:128083909..128083918, + |
5.42e-195 | FFCP PHASE1:Hg19::chr10:33244302..33244305,-#_a94794a00b78c9028f3bf3b1af3efa58 | p@chr10:33244302..33244305, - |
5.42e-195 | FFCP PHASE2:Hg19::chr1:145473297..145473306,+#_a94794a00b78c9028f3bf3b1af3efa58 | p7@AB464458 |
5.42e-195 | FFCP PHASE1:Hg19::chr7:80080929..80080934,+#_a94794a00b78c9028f3bf3b1af3efa58 | p@chr7:80080929..80080934, + |
5.42e-195 | FFCP PHASE2:Hg19::chr3:2141949..2141956,+#_a94794a00b78c9028f3bf3b1af3efa58 | p21@CNTN4 |
5.42e-195 | FFCP PHASE1:Hg19::chr2:27806224..27806236,+#_a94794a00b78c9028f3bf3b1af3efa58 | p5@ZNF512 |
5.42e-195 | FFCP PHASE1:Hg19::chr4:169935485..169935488,-#_a94794a00b78c9028f3bf3b1af3efa58 | p@chr4:169935485..169935488, - |
5.42e-195 | FFCP PHASE1:Hg19::chr1:145473286..145473295,+#_a94794a00b78c9028f3bf3b1af3efa58 | p5@AB464458 |
5.42e-195 | FFCP PHASE1:Hg19::chr3:2141888..2141892,-#_a94794a00b78c9028f3bf3b1af3efa58 | p@chr3:2141888..2141892, - |
5.42e-195 | FFCP PHASE2:Hg19::chr14:88282738..88282741,-#_a94794a00b78c9028f3bf3b1af3efa58 | p1@ENST00000554519 |
5.42e-195 | FFCP PHASE1:Hg19::chr6:152589396..152589401,-#_a94794a00b78c9028f3bf3b1af3efa58 | p68@SYNE1 |
5.42e-195 | FFCP PHASE2:Hg19::chr8:107074457..107074458,+#_a94794a00b78c9028f3bf3b1af3efa58 | p@chr8:107074457..107074458, + |
5.42e-195 | FFCP PHASE2:Hg19::chr3:196296715..196296737,-#_a94794a00b78c9028f3bf3b1af3efa58 | p@chr3:196296715..196296737, - |
5.42e-195 | FFCP PHASE1:Hg19::chr1:192408018..192408032,-#_a94794a00b78c9028f3bf3b1af3efa58 | p@chr1:192408018..192408032, - |
5.42e-195 | FFCP PHASE1:Hg19::chr12:95941674..95941679,+#_a94794a00b78c9028f3bf3b1af3efa58 | p@chr12:95941674..95941679, + |
5.42e-195 | FFCP PHASE2:Hg19::chr3:30570717..30570723,-#_a94794a00b78c9028f3bf3b1af3efa58 | p@chr3:30570717..30570723, - |
5.42e-195 | FFCP PHASE2:Hg19::chr3:127441501..127441504,-#_a94794a00b78c9028f3bf3b1af3efa58 | p59@MGLL |
5.42e-195 | FFCP PHASE2:Hg19::chr12:71031372..71031377,-#_a94794a00b78c9028f3bf3b1af3efa58 | p25@PTPRB |
5.42e-195 | FFCP PHASE2:Hg19::chr4:139817600..139817609,-#_a94794a00b78c9028f3bf3b1af3efa58 | p@chr4:139817600..139817609, - |
5.42e-195 | FFCP PHASE2:Hg19::chr13:23027835..23027846,+#_a94794a00b78c9028f3bf3b1af3efa58 | p@chr13:23027835..23027846, + |
5.42e-195 | FFCP PHASE2:Hg19::chr15:96181408..96181419,-#_a94794a00b78c9028f3bf3b1af3efa58 | p@chr15:96181408..96181419, - |
5.42e-195 | FFCP PHASE1:Hg19::chr14:88282738..88282741,-#_a94794a00b78c9028f3bf3b1af3efa58 | p1@ENST00000554519 |
5.42e-195 | FFCP PHASE2:Hg19::chr6:150735319..150735330,+#_a94794a00b78c9028f3bf3b1af3efa58 | p@chr6:150735319..150735330, + |
5.42e-195 | FFCP PHASE1:Hg19::chr8:107074411..107074421,+#_a94794a00b78c9028f3bf3b1af3efa58 | p@chr8:107074411..107074421, + |
5.42e-195 | FFCP PHASE1:Hg19::chr1:198595896..198595910,+#_a94794a00b78c9028f3bf3b1af3efa58 | p@chr1:198595896..198595910, + |
5.42e-195 | FFCP PHASE1:Hg19::chr1:112916133..112916138,-#_a94794a00b78c9028f3bf3b1af3efa58 | p@chr1:112916133..112916138, - |
5.42e-195 | FFCP PHASE1:Hg19::chr15:96181408..96181419,-#_a94794a00b78c9028f3bf3b1af3efa58 | p@chr15:96181408..96181419, - |
5.42e-195 | FFCP PHASE1:Hg19::chr11:30252646..30252648,+#_a94794a00b78c9028f3bf3b1af3efa58 | p@chr11:30252646..30252648, + |
5.42e-195 | FFCP PHASE2:Hg19::chr6:152592460..152592465,-#_a94794a00b78c9028f3bf3b1af3efa58 | p@chr6:152592460..152592465, - |
5.42e-195 | FFCP PHASE2:Hg19::chr2:175629357..175629367,-#_a94794a00b78c9028f3bf3b1af3efa58 | p6@CHRNA1 |
5.42e-195 | FFCP PHASE1:Hg19::chr6:150735014..150735021,-#_a94794a00b78c9028f3bf3b1af3efa58 | p@chr6:150735014..150735021, - |
5.42e-195 | FFCP PHASE1:Hg19::chr20:36848135..36848142,-#_a94794a00b78c9028f3bf3b1af3efa58 | p@chr20:36848135..36848142, - |
5.42e-195 | FFCP PHASE2:Hg19::chr3:2141759..2141771,-#_a94794a00b78c9028f3bf3b1af3efa58 | p@chr3:2141759..2141771, - |
5.42e-195 | FFCP PHASE1:Hg19::chr9:13006722..13006729,-#_a94794a00b78c9028f3bf3b1af3efa58 | p@chr9:13006722..13006729, - |
5.42e-195 | FFCP PHASE1:Hg19::chr4:139817573..139817580,-#_a94794a00b78c9028f3bf3b1af3efa58 | p@chr4:139817573..139817580, - |