UBERON:0000163: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| Line 13: | Line 13: | ||
|located_in= | |located_in= | ||
|name=embryonic cloaca | |name=embryonic cloaca | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date= | |obo_creation_date= | ||
|part_of=UBERON:0000922;;UBERON:0001008;;UBERON:0012361 | |part_of=UBERON:0000922;;UBERON:0001008;;UBERON:0012361 | ||
Latest revision as of 17:07, 12 September 2014
| Name: | embryonic cloaca | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "Structure in the development of the urinary and reproductive organs[WP]. endoderm-lined chamber into which the hidgut and allantois empty in early embryos[MP]." [MP:0010115, Wikipedia:Cloaca_(embryology)] | ||
| Xrefs: |
| ||
| Synonyms: | "cloaca" RELATED SENSU [] | ||
| Comments: | compare UBERON:0000162 cloaca |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0000162(cloaca),UBERON:0002050(embryonic structure),UBERON:0006554(urinary system structure) |
|---|---|
| develops_from: | UBERON:0003064(intermediate mesoderm) |
| part_of: | UBERON:0000922(embryo),UBERON:0001008(renal system),UBERON:0012361(internal anal region) |
Children
| part of: | UBERON:0000164 (primitive urogenital sinus),UBERON:0009846 (embryonic cloacal epithelium) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0000163 (embryonic cloaca), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 4.58e-44 | FFCP PHASE2:Mm9::chr1:132699659..132699668,+#_e316cf67cdea70cfd5faed19ab5c809a | p@chr1:132699659..132699668, + |
| 4.58e-44 | FFCP PHASE1:Mm9::chr1:132699659..132699668,+#_e316cf67cdea70cfd5faed19ab5c809a | p@chr1:132699659..132699668, + |
| 1.7e-39 | FFCP PHASE2:Mm9::chr9:96425983..96425992,+#_e3e0ddc85fd10543e181f235533b6410 | p@chr9:96425983..96425992, + |
| 1.7e-39 | FFCP PHASE2:Mm9::chr15:58237385..58237400,+#_e3e0ddc85fd10543e181f235533b6410 | p@chr15:58237385..58237400, + |
| 1.7e-39 | FFCP PHASE1:Mm9::chr15:58237385..58237400,+#_e3e0ddc85fd10543e181f235533b6410 | p@chr15:58237385..58237400, + |
| 1.7e-39 | FFCP PHASE2:Mm9::chr7:114836650..114836663,+#_e3e0ddc85fd10543e181f235533b6410 | p@chr7:114836650..114836663, + |
| 1.7e-39 | FFCP PHASE1:Mm9::chr9:96425825..96425834,-#_e3e0ddc85fd10543e181f235533b6410 | p@chr9:96425825..96425834, - |
| 1.7e-39 | FFCP PHASE1:Mm9::chr7:114836650..114836663,+#_e3e0ddc85fd10543e181f235533b6410 | p@chr7:114836650..114836663, + |
| 1.7e-39 | FFCP PHASE2:Mm9::chr9:96425825..96425834,-#_e3e0ddc85fd10543e181f235533b6410 | p@chr9:96425825..96425834, - |
| 1.7e-39 | FFCP PHASE1:Mm9::chr9:96425983..96425992,+#_e3e0ddc85fd10543e181f235533b6410 | p@chr9:96425983..96425992, + |
| 2.66e-39 | FFCP PHASE2:Mm9::chr7:28914478..28914498,+#_074dff01ee6bc89ae62c73e7e0bd01b3 | p3@9530053A07Rik |
| 2.66e-39 | FFCP PHASE1:Mm9::chr7:28914450..28914477,+#_074dff01ee6bc89ae62c73e7e0bd01b3 | p2@9530053A07Rik |
| 2.66e-39 | FFCP PHASE2:Mm9::chr7:28900349..28900364,-#_074dff01ee6bc89ae62c73e7e0bd01b3 | p@chr7:28900349..28900364, - |
| 2.66e-39 | FFCP PHASE1:Mm9::chr5:120136866..120136874,+#_074dff01ee6bc89ae62c73e7e0bd01b3 | p@chr5:120136866..120136874, + |
| 2.66e-39 | FFCP PHASE1:Mm9::chr6:42547567..42547580,-#_074dff01ee6bc89ae62c73e7e0bd01b3 | p4@Fam115e |
| 2.66e-39 | FFCP PHASE1:Mm9::chr7:28922549..28922561,+#_074dff01ee6bc89ae62c73e7e0bd01b3 | p@chr7:28922549..28922561, + |
| 2.66e-39 | FFCP PHASE2:Mm9::chr19:11353922..11353934,-#_074dff01ee6bc89ae62c73e7e0bd01b3 | p@chr19:11353922..11353934, - |
| 2.66e-39 | FFCP PHASE1:Mm9::chr7:55028037..55028075,+#_074dff01ee6bc89ae62c73e7e0bd01b3 | p@chr7:55028037..55028075, + |
| 2.66e-39 | FFCP PHASE1:Mm9::chr7:28914478..28914498,+#_074dff01ee6bc89ae62c73e7e0bd01b3 | p3@9530053A07Rik |
| 2.66e-39 | FFCP PHASE1:Mm9::chr7:28924794..28924814,+#_074dff01ee6bc89ae62c73e7e0bd01b3 | p@chr7:28924794..28924814, + |
| 2.66e-39 | FFCP PHASE1:Mm9::chr7:28900349..28900364,-#_074dff01ee6bc89ae62c73e7e0bd01b3 | p@chr7:28900349..28900364, - |
| 2.66e-39 | FFCP PHASE2:Mm9::chr7:55028037..55028075,+#_074dff01ee6bc89ae62c73e7e0bd01b3 | p@chr7:55028037..55028075, + |
| 2.66e-39 | FFCP PHASE1:Mm9::chr6:124520368..124520379,+#_074dff01ee6bc89ae62c73e7e0bd01b3 | p4@C1rb |
| 2.66e-39 | FFCP PHASE2:Mm9::chr9:36337031..36337049,-#_074dff01ee6bc89ae62c73e7e0bd01b3 | p@chr9:36337031..36337049, - |
| 2.66e-39 | FFCP PHASE1:Mm9::chr19:11353922..11353934,-#_074dff01ee6bc89ae62c73e7e0bd01b3 | p@chr19:11353922..11353934, - |
| 2.66e-39 | FFCP PHASE2:Mm9::chr6:124520322..124520333,+#_074dff01ee6bc89ae62c73e7e0bd01b3 | p3@C1rb |
| 2.66e-39 | FFCP PHASE2:Mm9::chr6:124520368..124520379,+#_074dff01ee6bc89ae62c73e7e0bd01b3 | p4@C1rb |
| 2.66e-39 | FFCP PHASE2:Mm9::chr7:28922549..28922561,+#_074dff01ee6bc89ae62c73e7e0bd01b3 | p@chr7:28922549..28922561, + |
| 2.66e-39 | FFCP PHASE1:Mm9::chr9:120464717..120464741,+#_074dff01ee6bc89ae62c73e7e0bd01b3 | p@chr9:120464717..120464741, + |
| 2.66e-39 | FFCP PHASE2:Mm9::chr9:120464717..120464741,+#_074dff01ee6bc89ae62c73e7e0bd01b3 | p@chr9:120464717..120464741, + |
| 2.66e-39 | FFCP PHASE2:Mm9::chr7:28914450..28914477,+#_074dff01ee6bc89ae62c73e7e0bd01b3 | p2@9530053A07Rik |
| 2.66e-39 | FFCP PHASE2:Mm9::chr6:42547567..42547580,-#_074dff01ee6bc89ae62c73e7e0bd01b3 | p4@Fam115e |
| 2.66e-39 | FFCP PHASE2:Mm9::chr7:28924794..28924814,+#_074dff01ee6bc89ae62c73e7e0bd01b3 | p@chr7:28924794..28924814, + |
| 2.66e-39 | FFCP PHASE1:Mm9::chr6:124520322..124520333,+#_074dff01ee6bc89ae62c73e7e0bd01b3 | p3@C1rb |
| 2.66e-39 | FFCP PHASE1:Mm9::chr9:120464756..120464765,+#_074dff01ee6bc89ae62c73e7e0bd01b3 | p@chr9:120464756..120464765, + |
| 2.66e-39 | FFCP PHASE2:Mm9::chr9:120464756..120464765,+#_074dff01ee6bc89ae62c73e7e0bd01b3 | p@chr9:120464756..120464765, + |
| 2.66e-39 | FFCP PHASE1:Mm9::chr9:36337031..36337049,-#_074dff01ee6bc89ae62c73e7e0bd01b3 | p@chr9:36337031..36337049, - |
| 2.66e-39 | FFCP PHASE2:Mm9::chr5:120136866..120136874,+#_074dff01ee6bc89ae62c73e7e0bd01b3 | p@chr5:120136866..120136874, + |
| 2.02e-32 | FFCP PHASE1:Hg19::chr10:91567053..91567066,+#_6b1e331f45efc4f4c3a4057eba0ce019 | p@chr10:91567053..91567066, + |
| 2.02e-32 | FFCP PHASE2:Hg19::chr10:91567053..91567066,+#_6b1e331f45efc4f4c3a4057eba0ce019 | p@chr10:91567053..91567066, + |
| 2.02e-32 | FFCP PHASE1:Hg19::chr10:91567075..91567084,+#_6b1e331f45efc4f4c3a4057eba0ce019 | p@chr10:91567075..91567084, + |
| 2.02e-32 | FFCP PHASE2:Hg19::chr10:91567075..91567084,+#_6b1e331f45efc4f4c3a4057eba0ce019 | p@chr10:91567075..91567084, + |
| 4.03e-30 | FFCP PHASE1:Mm9::chr7:114836670..114836681,+#_6ff33442481e73ce0132f7e10c0ff600 | p@chr7:114836670..114836681, + |
| 4.03e-30 | FFCP PHASE1:Mm9::chr14:32955207..32955211,+#_6ff33442481e73ce0132f7e10c0ff600 | p1@Msmb |
| 4.03e-30 | FFCP PHASE2:Mm9::chr7:31397780..31397790,-#_6ff33442481e73ce0132f7e10c0ff600 | p3@Upk1a |
| 4.03e-30 | FFCP PHASE2:Mm9::chr3:92288406..92288413,-#_6ff33442481e73ce0132f7e10c0ff600 | p@chr3:92288406..92288413, - |
| 4.03e-30 | FFCP PHASE2:Mm9::chr7:114836670..114836681,+#_6ff33442481e73ce0132f7e10c0ff600 | p@chr7:114836670..114836681, + |
| 4.03e-30 | FFCP PHASE1:Mm9::chr7:31397780..31397790,-#_6ff33442481e73ce0132f7e10c0ff600 | p3@Upk1a |
| 4.03e-30 | FFCP PHASE1:Mm9::chr3:92288406..92288413,-#_6ff33442481e73ce0132f7e10c0ff600 | p@chr3:92288406..92288413, - |
| 4.03e-30 | FFCP PHASE2:Mm9::chr14:32955207..32955211,+#_6ff33442481e73ce0132f7e10c0ff600 | p1@Msmb |
| 5.61e-30 | FFCP PHASE2:Mm9::chr2:36098306..36098309,+#_5ee69073d950a70efac9795692a1081b | p5@Ptgs1 |
| 5.61e-30 | FFCP PHASE1:Mm9::chr7:55008002..55008008,-#_5ee69073d950a70efac9795692a1081b | p@chr7:55008002..55008008, - |
| 5.61e-30 | FFCP PHASE2:Mm9::chr9:7867982..7867988,-#_5ee69073d950a70efac9795692a1081b | p@chr9:7867982..7867988, - |
| 5.61e-30 | FFCP PHASE1:Mm9::chr1:37769602..37769611,-#_5ee69073d950a70efac9795692a1081b | p@chr1:37769602..37769611, - |
| 5.61e-30 | FFCP PHASE1:Mm9::chr12:93026806..93026816,-#_5ee69073d950a70efac9795692a1081b | p12@Ston2 |
| 5.61e-30 | FFCP PHASE2:Mm9::chr2:137020090..137020093,+#_5ee69073d950a70efac9795692a1081b | p@chr2:137020090..137020093, + |
| 5.61e-30 | FFCP PHASE1:Mm9::chr6:42551847..42551862,-#_5ee69073d950a70efac9795692a1081b | p@chr6:42551847..42551862, - |
| 5.61e-30 | FFCP PHASE2:Mm9::chr1:73048139..73048141,+#_5ee69073d950a70efac9795692a1081b | p@chr1:73048139..73048141, + |
| 5.61e-30 | FFCP PHASE2:Mm9::chr6:42547300..42547314,-#_5ee69073d950a70efac9795692a1081b | p7@Fam115e |
| 5.61e-30 | FFCP PHASE2:Mm9::chr9:122970758..122970759,+#_5ee69073d950a70efac9795692a1081b | p@chr9:122970758..122970759, + |
| 5.61e-30 | FFCP PHASE2:Mm9::chr11:89595040..89595050,-#_5ee69073d950a70efac9795692a1081b | p@chr11:89595040..89595050, - |
| 5.61e-30 | FFCP PHASE1:Mm9::chr6:42535901..42535907,-#_5ee69073d950a70efac9795692a1081b | p@chr6:42535901..42535907, - |
| 5.61e-30 | FFCP PHASE2:Mm9::chr6:22342065..22342073,-#_5ee69073d950a70efac9795692a1081b | p@chr6:22342065..22342073, - |
| 5.61e-30 | FFCP PHASE2:Mm9::chr6:42535901..42535907,-#_5ee69073d950a70efac9795692a1081b | p@chr6:42535901..42535907, - |
| 5.61e-30 | FFCP PHASE1:Mm9::chr14:68331267..68331286,-#_5ee69073d950a70efac9795692a1081b | p@chr14:68331267..68331286, - |
| 5.61e-30 | FFCP PHASE2:Mm9::chr6:134172953..134172958,+#_5ee69073d950a70efac9795692a1081b | p@chr6:134172953..134172958, + |
| 5.61e-30 | FFCP PHASE2:Mm9::chr7:55008002..55008008,-#_5ee69073d950a70efac9795692a1081b | p@chr7:55008002..55008008, - |
| 5.61e-30 | FFCP PHASE1:Mm9::chr14:29722238..29722242,-#_5ee69073d950a70efac9795692a1081b | p@chr14:29722238..29722242, - |
| 5.61e-30 | FFCP PHASE1:Mm9::chr3:95514619..95514622,-#_5ee69073d950a70efac9795692a1081b | p@chr3:95514619..95514622, - |
| 5.61e-30 | FFCP PHASE1:Mm9::chr15:101506878..101506897,-#_5ee69073d950a70efac9795692a1081b | p@chr15:101506878..101506897, - |
| 5.61e-30 | FFCP PHASE2:Mm9::chr6:57789909..57789916,-#_5ee69073d950a70efac9795692a1081b | p@chr6:57789909..57789916, - |
| 5.61e-30 | FFCP PHASE2:Mm9::chr6:42548119..42548136,-#_5ee69073d950a70efac9795692a1081b | p12@Fam115e |
| 5.61e-30 | FFCP PHASE2:Mm9::chr15:101506516..101506534,-#_5ee69073d950a70efac9795692a1081b | p@chr15:101506516..101506534, - |
| 5.61e-30 | FFCP PHASE1:Mm9::chr7:123747566..123747567,+#_5ee69073d950a70efac9795692a1081b | p@chr7:123747566..123747567, + |
| 5.61e-30 | FFCP PHASE2:Mm9::chr11:57320631..57320636,-#_5ee69073d950a70efac9795692a1081b | p5@Fam114a2 |
| 5.61e-30 | FFCP PHASE1:Mm9::chr5:86802562..86802592,-#_5ee69073d950a70efac9795692a1081b | p6@Tmprss11d |
| 5.61e-30 | FFCP PHASE2:Mm9::chr10:61188929..61188936,+#_5ee69073d950a70efac9795692a1081b | p@chr10:61188929..61188936, + |
| 5.61e-30 | FFCP PHASE1:Mm9::chr9:122970904..122970907,-#_5ee69073d950a70efac9795692a1081b | p@chr9:122970904..122970907, - |
| 5.61e-30 | FFCP PHASE2:Mm9::chr11:100108943..100108977,-#_5ee69073d950a70efac9795692a1081b | p@chr11:100108943..100108977, - |
| 5.61e-30 | FFCP PHASE1:Mm9::chr6:42536009..42536044,+#_5ee69073d950a70efac9795692a1081b | p@chr6:42536009..42536044, + |
| 5.61e-30 | FFCP PHASE1:Mm9::chr12:80992302..80992309,+#_5ee69073d950a70efac9795692a1081b | p@chr12:80992302..80992309, + |
| 5.61e-30 | FFCP PHASE2:Mm9::chr4:122366201..122366206,-#_5ee69073d950a70efac9795692a1081b | p@chr4:122366201..122366206, - |
| 5.61e-30 | FFCP PHASE1:Mm9::chr5:33251992..33251995,+#_5ee69073d950a70efac9795692a1081b | p@chr5:33251992..33251995, + |
| 5.61e-30 | FFCP PHASE1:Mm9::chr18:64859665..64859669,+#_5ee69073d950a70efac9795692a1081b | p@chr18:64859665..64859669, + |
| 5.61e-30 | FFCP PHASE1:Mm9::chr16:20186645..20186650,+#_5ee69073d950a70efac9795692a1081b | p@chr16:20186645..20186650, + |
| 5.61e-30 | FFCP PHASE2:Mm9::chr6:42536009..42536044,+#_5ee69073d950a70efac9795692a1081b | p@chr6:42536009..42536044, + |
| 5.61e-30 | FFCP PHASE2:Mm9::chr1:72981474..72981498,+#_5ee69073d950a70efac9795692a1081b | p@chr1:72981474..72981498, + |
| 5.61e-30 | FFCP PHASE2:Mm9::chr6:42543450..42543455,-#_5ee69073d950a70efac9795692a1081b | p@chr6:42543450..42543455, - |
| 5.61e-30 | FFCP PHASE2:Mm9::chr11:100065595..100065616,-#_5ee69073d950a70efac9795692a1081b | p@chr11:100065595..100065616, - |
| 5.61e-30 | FFCP PHASE1:Mm9::chr6:42535739..42535752,-#_5ee69073d950a70efac9795692a1081b | p@chr6:42535739..42535752, - |
| 5.61e-30 | FFCP PHASE2:Mm9::chr6:42535739..42535752,-#_5ee69073d950a70efac9795692a1081b | p@chr6:42535739..42535752, - |
| 5.61e-30 | FFCP PHASE2:Mm9::chr9:36300946..36300953,-#_5ee69073d950a70efac9795692a1081b | p@chr9:36300946..36300953, - |
| 5.61e-30 | FFCP PHASE1:Mm9::chr6:42547830..42547837,-#_5ee69073d950a70efac9795692a1081b | p8@Fam115e |
| 5.61e-30 | FFCP PHASE2:Mm9::chr9:74005044..74005065,+#_5ee69073d950a70efac9795692a1081b | p@chr9:74005044..74005065, + |
| 5.61e-30 | FFCP PHASE1:Mm9::chr6:54242736..54242738,-#_5ee69073d950a70efac9795692a1081b | p@chr6:54242736..54242738, - |
| 5.61e-30 | FFCP PHASE1:Mm9::chr6:134172953..134172958,+#_5ee69073d950a70efac9795692a1081b | p@chr6:134172953..134172958, + |
| 5.61e-30 | FFCP PHASE1:Mm9::chr6:42539787..42539797,-#_5ee69073d950a70efac9795692a1081b | p@chr6:42539787..42539797, - |
| 5.61e-30 | FFCP PHASE2:Mm9::chr16:20186645..20186650,+#_5ee69073d950a70efac9795692a1081b | p@chr16:20186645..20186650, + |
| 5.61e-30 | FFCP PHASE1:Mm9::chrX:137642090..137642093,-#_5ee69073d950a70efac9795692a1081b | p8@Col4a6 |
| 5.61e-30 | FFCP PHASE1:Mm9::chr6:42547375..42547383,-#_5ee69073d950a70efac9795692a1081b | p10@Fam115e |
