Personal tools

UBERON:0001825: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
Line 13: Line 13:
|located_in=
|located_in=
|name=paranasal sinus
|name=paranasal sinus
|namespace=
|namespace=FANTOM
|obo_creation_date=
|obo_creation_date=
|part_of=UBERON:0001004;;UBERON:0003129
|part_of=UBERON:0001004;;UBERON:0003129

Latest revision as of 17:20, 12 September 2014

Name:paranasal sinus
Namespace:FANTOM
Definition:"Paranasal sinuses are air-filled spaces, communicating with the nasal cavity, within the bones of the skull and face. [WP,unvetted]." [Wikipedia:Paranasal_sinuses]
Xrefs:
links:

EHDAA:6489
EMAPA:18633
EV:0100038
FMA:59679
GAID:355
[ 200px-Nnh_front.svg.png 200px-Nnh_front.svg.png]
MA:0000431
MESH:A.04.531.621
ncithesaurus:Paranasal_Sinus

SCTID:181203001
Synonyms: "nasal sinus" RELATED [GAID:355]
"sinus" BROAD []
Comments:Arise as epithelial lined diverticula of the lining of the nasal cavity. The extent of sinus development varies with species, most of the development occurs postnatally
Alt_id: UBERON:FMA_59679-MA_0000431
Subset: uberon_slim

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0002553(anatomical cavity)
part_of:UBERON:0001004(respiratory system),UBERON:0003129(skull)



Children

is a:UBERON:0001764 (maxillary sinus)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology


Human (Homo sapiens)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0001825 (paranasal sinus), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data


P-valueFFCPShort description
5.42e-195FFCP PHASE1:Hg19::chr8:48079110..48079116,-#_22f16c00ada5db584274643abaade301p@chr8:48079110..48079116, -
5.42e-195FFCP PHASE1:Hg19::chr19:36222531..36222539,+#_22f16c00ada5db584274643abaade301p@chr19:36222531..36222539, +
5.42e-195FFCP PHASE2:Hg19::chr2:99909329..99909333,-#_22f16c00ada5db584274643abaade301p@chr2:99909329..99909333, -
5.42e-195FFCP PHASE1:Hg19::chr7:120789556..120789585,+#_22f16c00ada5db584274643abaade301p11@C7orf58
5.42e-195FFCP PHASE2:Hg19::chr7:120789549..120789552,+#_22f16c00ada5db584274643abaade301p44@C7orf58
5.42e-195FFCP PHASE2:Hg19::chr7:93169246..93169258,+#_22f16c00ada5db584274643abaade301p@chr7:93169246..93169258, +
5.42e-195FFCP PHASE2:Hg19::chr12:92247594..92247605,-#_22f16c00ada5db584274643abaade301p@chr12:92247594..92247605, -
5.42e-195FFCP PHASE2:Hg19::chr8:74985038..74985063,+#_22f16c00ada5db584274643abaade301p@chr8:74985038..74985063, +
5.42e-195FFCP PHASE1:Hg19::chr1:213822723..213822727,-#_22f16c00ada5db584274643abaade301p@chr1:213822723..213822727, -
5.42e-195FFCP PHASE2:Hg19::chr13:101081145..101081150,+#_22f16c00ada5db584274643abaade301p@chr13:101081145..101081150, +
5.42e-195FFCP PHASE2:Hg19::chr19:36222531..36222539,+#_22f16c00ada5db584274643abaade301p@chr19:36222531..36222539, +
5.42e-195FFCP PHASE1:Hg19::chr12:92247594..92247605,-#_22f16c00ada5db584274643abaade301p@chr12:92247594..92247605, -
5.42e-195FFCP PHASE1:Hg19::chr4:16460563..16460585,+#_22f16c00ada5db584274643abaade301p@chr4:16460563..16460585, +
5.42e-195FFCP PHASE1:Hg19::chr8:74985038..74985063,+#_22f16c00ada5db584274643abaade301p@chr8:74985038..74985063, +
5.42e-195FFCP PHASE1:Hg19::chr3:52643526..52643537,-#_22f16c00ada5db584274643abaade301p8@PBRM1
5.42e-195FFCP PHASE1:Hg19::chr7:93169246..93169258,+#_22f16c00ada5db584274643abaade301p@chr7:93169246..93169258, +
5.42e-195FFCP PHASE2:Hg19::chr7:120789556..120789585,+#_22f16c00ada5db584274643abaade301p11@C7orf58
5.42e-195FFCP PHASE1:Hg19::chr13:101081145..101081150,+#_22f16c00ada5db584274643abaade301p@chr13:101081145..101081150, +
5.42e-195FFCP PHASE2:Hg19::chr12:92247611..92247618,-#_22f16c00ada5db584274643abaade301p@chr12:92247611..92247618, -
5.42e-195FFCP PHASE2:Hg19::chr1:213822723..213822727,-#_22f16c00ada5db584274643abaade301p@chr1:213822723..213822727, -
5.42e-195FFCP PHASE1:Hg19::chr19:46580415..46580420,-#_22f16c00ada5db584274643abaade301p10@ENST00000366172, p10@uc002pdz.1
5.42e-195FFCP PHASE1:Hg19::chr12:92247611..92247618,-#_22f16c00ada5db584274643abaade301p@chr12:92247611..92247618, -
5.42e-195FFCP PHASE2:Hg19::chr3:52643526..52643537,-#_22f16c00ada5db584274643abaade301p8@PBRM1
5.42e-195FFCP PHASE2:Hg19::chr4:16460563..16460585,+#_22f16c00ada5db584274643abaade301p@chr4:16460563..16460585, +
5.42e-195FFCP PHASE2:Hg19::chr8:117816627..117816634,+#_22f16c00ada5db584274643abaade301p@chr8:117816627..117816634, +
5.42e-195FFCP PHASE2:Hg19::chr17:17529540..17529545,-#_22f16c00ada5db584274643abaade301p@chr17:17529540..17529545, -
5.42e-195FFCP PHASE2:Hg19::chr12:92247626..92247635,-#_22f16c00ada5db584274643abaade301p@chr12:92247626..92247635, -
5.42e-195FFCP PHASE2:Hg19::chr8:48079099..48079105,-#_22f16c00ada5db584274643abaade301p@chr8:48079099..48079105, -
5.42e-195FFCP PHASE1:Hg19::chr1:172613350..172613353,+#_22f16c00ada5db584274643abaade301p@chr1:172613350..172613353, +
5.42e-195FFCP PHASE2:Hg19::chr19:46580415..46580420,-#_22f16c00ada5db584274643abaade301p10@ENST00000366172, p10@uc002pdz.1
5.42e-195FFCP PHASE2:Hg19::chrX:11455274..11455297,-#_22f16c00ada5db584274643abaade301p@chrX:11455274..11455297, -
5.42e-195FFCP PHASE2:Hg19::chr10:1895618..1895626,+#_22f16c00ada5db584274643abaade301p@chr10:1895618..1895626, +
5.42e-195FFCP PHASE1:Hg19::chr12:92247626..92247635,-#_22f16c00ada5db584274643abaade301p@chr12:92247626..92247635, -
5.42e-195FFCP PHASE1:Hg19::chr8:117816627..117816634,+#_22f16c00ada5db584274643abaade301p@chr8:117816627..117816634, +
5.42e-195FFCP PHASE1:Hg19::chr8:48079099..48079105,-#_22f16c00ada5db584274643abaade301p@chr8:48079099..48079105, -
5.42e-195FFCP PHASE1:Hg19::chr10:1895618..1895626,+#_22f16c00ada5db584274643abaade301p@chr10:1895618..1895626, +
5.42e-195FFCP PHASE2:Hg19::chr9:11935598..11935637,+#_22f16c00ada5db584274643abaade301p@chr9:11935598..11935637, +
5.42e-195FFCP PHASE1:Hg19::chr2:99909329..99909333,-#_22f16c00ada5db584274643abaade301p@chr2:99909329..99909333, -
5.42e-195FFCP PHASE2:Hg19::chr12:92247725..92247764,+#_22f16c00ada5db584274643abaade301p@chr12:92247725..92247764, +
5.42e-195FFCP PHASE2:Hg19::chr8:48079110..48079116,-#_22f16c00ada5db584274643abaade301p@chr8:48079110..48079116, -
5.42e-195FFCP PHASE1:Hg19::chr7:120789549..120789552,+#_22f16c00ada5db584274643abaade301p44@C7orf58
5.42e-195FFCP PHASE2:Hg19::chr1:172613350..172613353,+#_22f16c00ada5db584274643abaade301p@chr1:172613350..172613353, +
5.42e-195FFCP PHASE1:Hg19::chrX:11455274..11455297,-#_22f16c00ada5db584274643abaade301p@chrX:11455274..11455297, -
5.42e-195FFCP PHASE1:Hg19::chr9:11935598..11935637,+#_22f16c00ada5db584274643abaade301p@chr9:11935598..11935637, +
5.42e-195FFCP PHASE1:Hg19::chr17:17529540..17529545,-#_22f16c00ada5db584274643abaade301p@chr17:17529540..17529545, -
5.42e-195FFCP PHASE1:Hg19::chr12:92247725..92247764,+#_22f16c00ada5db584274643abaade301p@chr12:92247725..92247764, +
9.37e-99FFCP PHASE1:Hg19::chr14:79331250..79331261,+#_7aa88448afdf60c93ebfa364387b5c13p@chr14:79331250..79331261, +
9.37e-99FFCP PHASE1:Hg19::chr19:46580353..46580358,-#_7aa88448afdf60c93ebfa364387b5c13p1@AK057802
9.37e-99FFCP PHASE2:Hg19::chrX:11308608..11308610,-#_7aa88448afdf60c93ebfa364387b5c13p22@ARHGAP6
9.37e-99FFCP PHASE2:Hg19::chr3:86926149..86926150,+#_7aa88448afdf60c93ebfa364387b5c13p@chr3:86926149..86926150, +
9.37e-99FFCP PHASE2:Hg19::chr15:67649625..67649632,+#_7aa88448afdf60c93ebfa364387b5c13p10@IQCH
9.37e-99FFCP PHASE1:Hg19::chr12:92247545..92247559,-#_7aa88448afdf60c93ebfa364387b5c13p@chr12:92247545..92247559, -
9.37e-99FFCP PHASE1:Hg19::chrX:11460430..11460434,-#_7aa88448afdf60c93ebfa364387b5c13p@chrX:11460430..11460434, -
9.37e-99FFCP PHASE2:Hg19::chr14:79331318..79331327,+#_7aa88448afdf60c93ebfa364387b5c13p@chr14:79331318..79331327, +
9.37e-99FFCP PHASE2:Hg19::chr9:135932153..135932160,+#_7aa88448afdf60c93ebfa364387b5c13p@chr9:135932153..135932160, +
9.37e-99FFCP PHASE1:Hg19::chr3:129690202..129690210,-#_7aa88448afdf60c93ebfa364387b5c13p@chr3:129690202..129690210, -
9.37e-99FFCP PHASE2:Hg19::chrX:11502792..11502801,-#_7aa88448afdf60c93ebfa364387b5c13p@chrX:11502792..11502801, -
9.37e-99FFCP PHASE1:Hg19::chr3:95928653..95928656,-#_7aa88448afdf60c93ebfa364387b5c13p@chr3:95928653..95928656, -
9.37e-99FFCP PHASE1:Hg19::chr6:56507200..56507216,-#_7aa88448afdf60c93ebfa364387b5c13p@chr6:56507200..56507216, -
9.37e-99FFCP PHASE1:Hg19::chr15:67649625..67649632,+#_7aa88448afdf60c93ebfa364387b5c13p10@IQCH
9.37e-99FFCP PHASE2:Hg19::chr19:46580353..46580358,-#_7aa88448afdf60c93ebfa364387b5c13p1@AK057802
9.37e-99FFCP PHASE1:Hg19::chr14:79331318..79331327,+#_7aa88448afdf60c93ebfa364387b5c13p@chr14:79331318..79331327, +
9.37e-99FFCP PHASE1:Hg19::chrX:11308608..11308610,-#_7aa88448afdf60c93ebfa364387b5c13p22@ARHGAP6
9.37e-99FFCP PHASE1:Hg19::chr20:36470708..36470717,+#_7aa88448afdf60c93ebfa364387b5c13p10@CTNNBL1
9.37e-99FFCP PHASE1:Hg19::chr9:135932153..135932160,+#_7aa88448afdf60c93ebfa364387b5c13p@chr9:135932153..135932160, +
9.37e-99FFCP PHASE1:Hg19::chrX:11502792..11502801,-#_7aa88448afdf60c93ebfa364387b5c13p@chrX:11502792..11502801, -
9.37e-99FFCP PHASE2:Hg19::chr15:46282024..46282028,+#_7aa88448afdf60c93ebfa364387b5c13p@chr15:46282024..46282028, +
9.37e-99FFCP PHASE2:Hg19::chr3:129690202..129690210,-#_7aa88448afdf60c93ebfa364387b5c13p@chr3:129690202..129690210, -
9.37e-99FFCP PHASE2:Hg19::chr11:36489757..36489777,+#_7aa88448afdf60c93ebfa364387b5c13p@chr11:36489757..36489777, +
9.37e-99FFCP PHASE1:Hg19::chr11:69634335..69634346,-#_7aa88448afdf60c93ebfa364387b5c13p6@FGF3
9.37e-99FFCP PHASE2:Hg19::chrX:11502822..11502831,-#_7aa88448afdf60c93ebfa364387b5c13p@chrX:11502822..11502831, -
9.37e-99FFCP PHASE2:Hg19::chr3:95928653..95928656,-#_7aa88448afdf60c93ebfa364387b5c13p@chr3:95928653..95928656, -
9.37e-99FFCP PHASE2:Hg19::chr6:56507200..56507216,-#_7aa88448afdf60c93ebfa364387b5c13p@chr6:56507200..56507216, -
9.37e-99FFCP PHASE1:Hg19::chr5:139064799..139064811,+#_7aa88448afdf60c93ebfa364387b5c13p@chr5:139064799..139064811, +
9.37e-99FFCP PHASE1:Hg19::chr3:95928667..95928672,-#_7aa88448afdf60c93ebfa364387b5c13p@chr3:95928667..95928672, -
9.37e-99FFCP PHASE2:Hg19::chr14:79331180..79331190,+#_7aa88448afdf60c93ebfa364387b5c13p@chr14:79331180..79331190, +
9.37e-99FFCP PHASE1:Hg19::chr11:36489757..36489777,+#_7aa88448afdf60c93ebfa364387b5c13p@chr11:36489757..36489777, +
9.37e-99FFCP PHASE1:Hg19::chr1:213822756..213822765,-#_7aa88448afdf60c93ebfa364387b5c13p@chr1:213822756..213822765, -
9.37e-99FFCP PHASE1:Hg19::chr21:46194934..46194979,-#_7aa88448afdf60c93ebfa364387b5c13p17@UBE2G2
9.37e-99FFCP PHASE1:Hg19::chr5:146939429..146939436,+#_7aa88448afdf60c93ebfa364387b5c13p3@LOC153469
9.37e-99FFCP PHASE2:Hg19::chr20:36470708..36470717,+#_7aa88448afdf60c93ebfa364387b5c13p10@CTNNBL1
9.37e-99FFCP PHASE1:Hg19::chr20:36470727..36470734,+#_7aa88448afdf60c93ebfa364387b5c13p11@CTNNBL1
9.37e-99FFCP PHASE1:Hg19::chr15:46282024..46282028,+#_7aa88448afdf60c93ebfa364387b5c13p@chr15:46282024..46282028, +
9.37e-99FFCP PHASE2:Hg19::chr7:80141406..80141411,-#_7aa88448afdf60c93ebfa364387b5c13p3@GNAT3
9.37e-99FFCP PHASE1:Hg19::chr18:8625916..8625925,+#_7aa88448afdf60c93ebfa364387b5c13p@chr18:8625916..8625925, +
9.37e-99FFCP PHASE1:Hg19::chr1:11000123..11000131,-#_7aa88448afdf60c93ebfa364387b5c13p@chr1:11000123..11000131, -
9.37e-99FFCP PHASE1:Hg19::chrX:11502822..11502831,-#_7aa88448afdf60c93ebfa364387b5c13p@chrX:11502822..11502831, -
9.37e-99FFCP PHASE1:Hg19::chr14:79331180..79331190,+#_7aa88448afdf60c93ebfa364387b5c13p@chr14:79331180..79331190, +
9.37e-99FFCP PHASE2:Hg19::chrX:151620193..151620201,-#_7aa88448afdf60c93ebfa364387b5c13p4@GABRA3
9.37e-99FFCP PHASE2:Hg19::chr10:111171762..111171773,-#_7aa88448afdf60c93ebfa364387b5c13p@chr10:111171762..111171773, -
9.37e-99FFCP PHASE2:Hg19::chr5:139064799..139064811,+#_7aa88448afdf60c93ebfa364387b5c13p@chr5:139064799..139064811, +
9.37e-99FFCP PHASE2:Hg19::chr3:95928667..95928672,-#_7aa88448afdf60c93ebfa364387b5c13p@chr3:95928667..95928672, -
9.37e-99FFCP PHASE1:Hg19::chr3:95928676..95928681,-#_7aa88448afdf60c93ebfa364387b5c13p@chr3:95928676..95928681, -
9.37e-99FFCP PHASE1:Hg19::chr5:175298205..175298209,-#_7aa88448afdf60c93ebfa364387b5c13p@chr5:175298205..175298209, -
9.37e-99FFCP PHASE2:Hg19::chr1:213822756..213822765,-#_7aa88448afdf60c93ebfa364387b5c13p@chr1:213822756..213822765, -
9.37e-99FFCP PHASE2:Hg19::chr14:79331221..79331232,+#_7aa88448afdf60c93ebfa364387b5c13p@chr14:79331221..79331232, +
9.37e-99FFCP PHASE2:Hg19::chr12:79406759..79406766,+#_7aa88448afdf60c93ebfa364387b5c13p@chr12:79406759..79406766, +
9.37e-99FFCP PHASE1:Hg19::chr10:111171762..111171773,-#_7aa88448afdf60c93ebfa364387b5c13p@chr10:111171762..111171773, -
9.37e-99FFCP PHASE2:Hg19::chr21:46194934..46194979,-#_7aa88448afdf60c93ebfa364387b5c13p17@UBE2G2
9.37e-99FFCP PHASE1:Hg19::chr19:46580452..46580460,-#_7aa88448afdf60c93ebfa364387b5c13p9@ENST00000366172, p9@uc002pdz.1